| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is 42522649
Identifier: 42522649
GI number: 42522649
Start: 1036174
End: 1036788
Strand: Direct
Name: 42522649
Synonym: Bd1100
Alternate gene names: NA
Gene position: 1036174-1036788 (Clockwise)
Preceding gene: 42522642
Following gene: 42522650
Centisome position: 27.39
GC content: 50.41
Gene sequence:
>615_bases TTGATTTTGCCCTTGTTTTTAAGCTCCATTGCCACAGCCCAAGACTCCCAGCCCGTGGTCGGCCGTGACGCTGCTGCGAA GTACTTCCAACCGCGTGATACGGCTTCATCTTCTTCGTTCAATACCGGCGGCGGTCCGTCGGATCATTATCTGGCTTTGC ACTTTGGCCGTTACATGGCTTCACAATCCTATGACTGGGGTAAGAACGGCCAAGAGGACGACGTGGGTAAAAATCAATTC GGGGTCACTTACCGAGTGGGCGAGTGGTACAACTCCATGGATTTGCTGCTAAGAATGGATTATTCCGAATTCGACGTGGG CGGTGAAACGCCGAACAAGCTTTCGTTTGTTCCGATGATCACCTTCCCGGATGCGACCTCACGTTTCCCTCTGTATTTTG GAGCCGGTGCCGGATTGGGTGTGTTCTTTAAACAGGCCTCTGGAAAATCTGCACTGTCCCTGGATTACCAGCTGATCGCC GGCGCTCGATTCTTCAATATCTTTGAAAACACTGGATTCTTCATTGAAGCTGGTTTAAAAAACCACCTTCTTATTCTGTC CTCGGGGCAGTTCAACGGAACCTTTTTGGCCACTGGCCTGGTGTTTACATTTTGA
Upstream 100 bases:
>100_bases CTAGTGTTGATGACTTCGCGTGTCAACGACTTCCTCGCCAGAGGGAAAACTGAATAGAATAGAAGCCAGAATTGAGGTGC GTGTGAAGACTTTTCTATCG
Downstream 100 bases:
>100_bases AAATTCACAAGCATCTCGTATCTGAAATCGTTACCGCTCTGGATGAAATCTTTGAACAGGGTTTCTATGCTGACAAAGTC ATCCAGCGCCATCTGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMASQSYDWGKNGQEDDVGKNQF GVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMITFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIA GARFFNIFENTGFFIEAGLKNHLLILSSGQFNGTFLATGLVFTF
Sequences:
>Translated_204_residues MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMASQSYDWGKNGQEDDVGKNQF GVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMITFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIA GARFFNIFENTGFFIEAGLKNHLLILSSGQFNGTFLATGLVFTF >Mature_204_residues MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMASQSYDWGKNGQEDDVGKNQF GVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMITFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIA GARFFNIFENTGFFIEAGLKNHLLILSSGQFNGTFLATGLVFTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22355; Mature: 22355
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMA CCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHH SQSYDWGKNGQEDDVGKNQFGVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMI CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEE TFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIAGARFFNIFENTGFFIEAGLK ECCCCCCCCCEEEECCCCCEEEEECCCCCCEEEECEEEECCHHEEEECCCCCEEEEECCC NHLLILSSGQFNGTFLATGLVFTF CEEEEEECCCCCCEEEEEEEEEEC >Mature Secondary Structure MILPLFLSSIATAQDSQPVVGRDAAAKYFQPRDTASSSSFNTGGGPSDHYLALHFGRYMA CCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHH SQSYDWGKNGQEDDVGKNQFGVTYRVGEWYNSMDLLLRMDYSEFDVGGETPNKLSFVPMI CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEE TFPDATSRFPLYFGAGAGLGVFFKQASGKSALSLDYQLIAGARFFNIFENTGFFIEAGLK ECCCCCCCCCEEEECCCCCEEEEECCCCCCEEEECEEEECCHHEEEECCCCCEEEEECCC NHLLILSSGQFNGTFLATGLVFTF CEEEEEECCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA