| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522627
Identifier: 42522627
GI number: 42522627
Start: 1017016
End: 1017399
Strand: Direct
Name: 42522627
Synonym: Bd1073
Alternate gene names: NA
Gene position: 1017016-1017399 (Clockwise)
Preceding gene: 42522626
Following gene: 42522628
Centisome position: 26.88
GC content: 45.31
Gene sequence:
>384_bases ATGAACTTGTCAGCTGTTTTGTTTGTTCTTTTATCCGTCTCATTTTCTCAGGCCGCAGAGAAGACTTTTCAGTGCCGTGG TGATTTTAAAAACTCGAATTTGATCTTCCGCTACTCTTTGATGGTGGATGGAAAGAACTCGCGCAGTCGTCTGATGTTTT ACAAAGAAGATCGTATGACCAAAGATTTCGGCTGGAAGAAGTTTGCTTCGGCTTCAGGCAAGATTGTAGTCGATTCTCCG TGGTTGCAGTATCGCGCCTATCTGGTGCCAGCGAGCACAGTGTATGAGCTGGTGCTGGCAGAGCCAGCGACAGATGTGCA GATTGATGACCTGCCTTTCAGTCGTTTTTACTGTGTGAAATTTTTGCCTTATTTCCCTAAGTGA
Upstream 100 bases:
>100_bases GGGTTGTGCTTTTTGCGTTTCAGGGGTTCGTGGAACGCTATCATTTTCTTTCACAGGCCTTTTGCTTGCGTGCTTTTGGC TCTGACGCCCTAATAGTCCT
Downstream 100 bases:
>100_bases AAACGCAATGAAAGGGAAATGATATTCGCTCGGATAATATCCTGAAAAATTTGACACTGAGTGGGGCCGTCCATTAGGAG TGTTCAAACCTTTAAAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMTKDFGWKKFASASGKIVVDSP WLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVKFLPYFPK
Sequences:
>Translated_127_residues MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMTKDFGWKKFASASGKIVVDSP WLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVKFLPYFPK >Mature_127_residues MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMTKDFGWKKFASASGKIVVDSP WLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVKFLPYFPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14699; Mature: 14699
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMT CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCC KDFGWKKFASASGKIVVDSPWLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVK CCCCCHHHCCCCCEEEECCCCHHEEEEECCHHHHHHHHCCCCCCCCEECCCCCHHEEEEE FLPYFPK ECCCCCC >Mature Secondary Structure MNLSAVLFVLLSVSFSQAAEKTFQCRGDFKNSNLIFRYSLMVDGKNSRSRLMFYKEDRMT CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCC KDFGWKKFASASGKIVVDSPWLQYRAYLVPASTVYELVLAEPATDVQIDDLPFSRFYCVK CCCCCHHHCCCCCEEEECCCCHHEEEEECCHHHHHHHHCCCCCCCCEECCCCCHHEEEEE FLPYFPK ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA