| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is futA
Identifier: 42522628
GI number: 42522628
Start: 1017506
End: 1018498
Strand: Direct
Name: futA
Synonym: Bd1074
Alternate gene names: NA
Gene position: 1017506-1018498 (Clockwise)
Preceding gene: 42522627
Following gene: 42522630
Centisome position: 26.9
GC content: 48.34
Gene sequence:
>993_bases ATGAAATTTTTGAGCGCAATCGTGACTCTGTTGGCGGCGGTGACCGTTCAGGCGAACACAGCCAAGTTGGTTTTGTATTC CTCTTATGATGGCGAAAGACTTGCGCCGATTCTGCAACCTTTCACTCAGGCTACCGGTATTCAGGTGGAAGTGGTGTTTG CTTCCTCGACAGATCTTTTGAAACAACTTGAAACTGAAGGTTTGAACTCCCGCGCGGATCTTTATCTGGATAAAGACATC GTTTATATGGGTGAAGCGAACCGCAAAGGTTTCCTGCAGTCTTTCACATCCAATGGTGTGACTCAGAAAGTTCCTTCCCA CTTGATCTCTGATGACAAGAACTGGTTCCTGCTGTTCTACCGTGCACGCACTGTGATGTACAACACACAGAAAGTGAATC CGGAAGACCTGAAAACTTATGCGGACCTGGGCGATCCTAAATGGAAAGGTCAGTTGTGCCTAAGAACCTCCAAAAACAGC TATAACGAAGCAATGGCTGCTTACTTCATCAAGCACTTCGGTGAAATCCAAACGACAGCGTTGTTAGAGTCCTGGGTGAA AAATCTGGCAGTGGAGCCTTTAAAAGGGGACCGTGACGTGATCGCGGCTATCGCCAACGGCACTTGTGCGATCGGTGTTG CCAACACTTACTATCTGGCGCCTATCGTTCGTGATGATGTGACTTATCCAGTGGGTGTTCGTTTCCTGGAGCAGGACAAA GTCGGCGCACACATCAACGGTGTGGGTATCGGGATCACGAAGTCCTCCAAAAACACAGCGGCAGCCAATGCTTTCCTTGA GTTCATGGTTTCGAAGCCGGTTCAAGAAGCCGTTGCTGGCGGTTTTAGTCAGTACCCTGCAAGCAAGGAAGCAGATATGG CTCCCATCTTGAAAGAATTCGGTGGTTTTGCTGAAGACATGACCAACGTGAATGCAGTTTCTGATCTTGTGCCAGCAGGT ATCGAGTTGATGAAAAAAGCGGGTTACAAATAG
Upstream 100 bases:
>100_bases AATGAAAGGGAAATGATATTCGCTCGGATAATATCCTGAAAAATTTGACACTGAGTGGGGCCGTCCATTAGGAGTGTTCA AACCTTTAAAGGAGCAACTG
Downstream 100 bases:
>100_bases TTCCTGCGAACTAAAATAAAAAAAGCCACCTATCAGGTGGCTTTTTTTTTGCCTTTACAGCCTAGTTTATTGCGTTTTCT GGGAAGAGGCGGTCATGGAG
Product: putative iron ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKFLSAIVTLLAAVTVQANTAKLVLYSSYDGERLAPILQPFTQATGIQVEVVFASSTDLLKQLETEGLNSRADLYLDKDI VYMGEANRKGFLQSFTSNGVTQKVPSHLISDDKNWFLLFYRARTVMYNTQKVNPEDLKTYADLGDPKWKGQLCLRTSKNS YNEAMAAYFIKHFGEIQTTALLESWVKNLAVEPLKGDRDVIAAIANGTCAIGVANTYYLAPIVRDDVTYPVGVRFLEQDK VGAHINGVGIGITKSSKNTAAANAFLEFMVSKPVQEAVAGGFSQYPASKEADMAPILKEFGGFAEDMTNVNAVSDLVPAG IELMKKAGYK
Sequences:
>Translated_330_residues MKFLSAIVTLLAAVTVQANTAKLVLYSSYDGERLAPILQPFTQATGIQVEVVFASSTDLLKQLETEGLNSRADLYLDKDI VYMGEANRKGFLQSFTSNGVTQKVPSHLISDDKNWFLLFYRARTVMYNTQKVNPEDLKTYADLGDPKWKGQLCLRTSKNS YNEAMAAYFIKHFGEIQTTALLESWVKNLAVEPLKGDRDVIAAIANGTCAIGVANTYYLAPIVRDDVTYPVGVRFLEQDK VGAHINGVGIGITKSSKNTAAANAFLEFMVSKPVQEAVAGGFSQYPASKEADMAPILKEFGGFAEDMTNVNAVSDLVPAG IELMKKAGYK >Mature_330_residues MKFLSAIVTLLAAVTVQANTAKLVLYSSYDGERLAPILQPFTQATGIQVEVVFASSTDLLKQLETEGLNSRADLYLDKDI VYMGEANRKGFLQSFTSNGVTQKVPSHLISDDKNWFLLFYRARTVMYNTQKVNPEDLKTYADLGDPKWKGQLCLRTSKNS YNEAMAAYFIKHFGEIQTTALLESWVKNLAVEPLKGDRDVIAAIANGTCAIGVANTYYLAPIVRDDVTYPVGVRFLEQDK VGAHINGVGIGITKSSKNTAAANAFLEFMVSKPVQEAVAGGFSQYPASKEADMAPILKEFGGFAEDMTNVNAVSDLVPAG IELMKKAGYK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36070; Mature: 36070
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLSAIVTLLAAVTVQANTAKLVLYSSYDGERLAPILQPFTQATGIQVEVVFASSTDLL CHHHHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHH KQLETEGLNSRADLYLDKDIVYMGEANRKGFLQSFTSNGVTQKVPSHLISDDKNWFLLFY HHHHHCCCCCCCCEEECCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEE RARTVMYNTQKVNPEDLKTYADLGDPKWKGQLCLRTSKNSYNEAMAAYFIKHFGEIQTTA EEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHH LLESWVKNLAVEPLKGDRDVIAAIANGTCAIGVANTYYLAPIVRDDVTYPVGVRFLEQDK HHHHHHHHCCCCCCCCCHHHEEEECCCEEEEEECCCEEEEEEHHCCCCCCCCCEEEECCC VGAHINGVGIGITKSSKNTAAANAFLEFMVSKPVQEAVAGGFSQYPASKEADMAPILKEF CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCHHHHHHHHH GGFAEDMTNVNAVSDLVPAGIELMKKAGYK CCHHHHHCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFLSAIVTLLAAVTVQANTAKLVLYSSYDGERLAPILQPFTQATGIQVEVVFASSTDLL CHHHHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHH KQLETEGLNSRADLYLDKDIVYMGEANRKGFLQSFTSNGVTQKVPSHLISDDKNWFLLFY HHHHHCCCCCCCCEEECCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEE RARTVMYNTQKVNPEDLKTYADLGDPKWKGQLCLRTSKNSYNEAMAAYFIKHFGEIQTTA EEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHH LLESWVKNLAVEPLKGDRDVIAAIANGTCAIGVANTYYLAPIVRDDVTYPVGVRFLEQDK HHHHHHHHCCCCCCCCCHHHEEEECCCEEEEEECCCEEEEEEHHCCCCCCCCCEEEECCC VGAHINGVGIGITKSSKNTAAANAFLEFMVSKPVQEAVAGGFSQYPASKEADMAPILKEF CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHCCCCCCCHHHHHHHHH GGFAEDMTNVNAVSDLVPAGIELMKKAGYK CCHHHHHCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]