| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is gldF
Identifier: 42522583
GI number: 42522583
Start: 970984
End: 971757
Strand: Direct
Name: gldF
Synonym: Bd1024
Alternate gene names: NA
Gene position: 970984-971757 (Clockwise)
Preceding gene: 42522582
Following gene: 42522584
Centisome position: 25.67
GC content: 50.0
Gene sequence:
>774_bases ATGAATCCAACAATGACAATCTTTAAAAAAGAGCTGAAGGGTTTTTACTTCAACTCAACATTCTGGGTGATCTGCTTCCT GATGAGCCTGGTGTTCAGCTGGGTGTATCCGATTCAATTGAATCTGTTTTCGCAGCTTTTGATGAACTACGTGATGCAAC AGGGGGTTCCTCAGAACCAGTTGAACATCCATTACGGGGTGTTCCTTCGCCAGCTGTCTTATCTGAACCTGCTTTTGATC TTTGTGGTTCCCGCTTTGACGATGAAACTTTTTGCGGAAGAAAAGAAGCTTCGCACTTTTGATCTGCTTCTGACTTCACC AGTGACATCCCTGCAGATCGTTCTGGGCAAGTACCTGGCCGCCTTGGGTGCTGTGGGTGGTCTGGTGATGCTGGCATTGT TGTACCCGGTGGCGACGTCCACTTTGGCGACGGTGAACTGGGGGCCGCTGGTTGTGGCTTTCCTGGGAATCTTCCTGGTG GGGGCTGTGTATGCGGCGATGGATCTGTTTGCGTCTTCTTTGACTGAAAACAGCATCGTGGCGTATGTGGCGTCGGTGAT CTTCAACGTGTCCATCTGGTTTGTTGGCATTGGCACGGAAGTTATGGACAGCGAAGCGGCTCGCAAGATCTTTGAGCACG TTTCCCTGAGCAGTCATCTTTCCAGTCTGGTGGAAGGCACGGTGCGCTCTAATGCGCTGGTGTTCTTCTTCAGTATTATT GTCCTGTTCTGTTTCCTGGCAGAGCGTGTTGTTGAATCCTCACGTTGGAGATAA
Upstream 100 bases:
>100_bases CCGGCGGTTACGGTTTGCTGGAACTGAGTCAGGCCAAACGGGATCTGGAAGATGTCTTCCTGAAACTTACATATGGTCAG CAGGAACGTGGAGGTGAGGC
Downstream 100 bases:
>100_bases GTCATGAGTAAATTGAGCAAAATTTCTTTCCTGTTCGCTGGGTTTTCTTTGGTCGCCATGTCCATCACTCGTTACCTATT GGGTGACTGGGTCCCGTTCT
Product: ABC-type transport system permease protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC-2 Type Transport System Permease Protein; ABC-Type Transport System; ABC-2 Type Transporter Superfamily; Abc Transporter Permease Protein; ABC-2 Type Transporter Superfamily Protein; ABC Transporter Permease Protein; ABC-Type Transport System Membrane Protein; ABC-Type Transport System Permease Protein; Protein Involved In Gliding Motility Gldf; ABC Transporter Inner Membrane Protein; Multi-Copper Maturation ABC Transporter Permease
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQLNIHYGVFLRQLSYLNLLLI FVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLAALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLV GAVYAAMDLFASSLTENSIVAYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII VLFCFLAERVVESSRWR
Sequences:
>Translated_257_residues MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQLNIHYGVFLRQLSYLNLLLI FVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLAALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLV GAVYAAMDLFASSLTENSIVAYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII VLFCFLAERVVESSRWR >Mature_257_residues MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQLNIHYGVFLRQLSYLNLLLI FVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLAALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLV GAVYAAMDLFASSLTENSIVAYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII VLFCFLAERVVESSRWR
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28763; Mature: 28763
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQ CCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LNIHYGVFLRQLSYLNLLLIFVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLVGAVYAAMDLFASSLTENSIV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII HHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLFCFLAERVVESSRWR HHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPTMTIFKKELKGFYFNSTFWVICFLMSLVFSWVYPIQLNLFSQLLMNYVMQQGVPQNQ CCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LNIHYGVFLRQLSYLNLLLIFVVPALTMKLFAEEKKLRTFDLLLTSPVTSLQIVLGKYLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ALGAVGGLVMLALLYPVATSTLATVNWGPLVVAFLGIFLVGAVYAAMDLFASSLTENSIV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH AYVASVIFNVSIWFVGIGTEVMDSEAARKIFEHVSLSSHLSSLVEGTVRSNALVFFFSII HHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLFCFLAERVVESSRWR HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA