| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is gldG
Identifier: 42522584
GI number: 42522584
Start: 971761
End: 973296
Strand: Direct
Name: gldG
Synonym: Bd1025
Alternate gene names: NA
Gene position: 971761-973296 (Clockwise)
Preceding gene: 42522583
Following gene: 42522585
Centisome position: 25.69
GC content: 49.93
Gene sequence:
>1536_bases ATGAGTAAATTGAGCAAAATTTCTTTCCTGTTCGCTGGGTTTTCTTTGGTCGCCATGTCCATCACTCGTTACCTATTGGG TGACTGGGTCCCGTTCTGCTGGCTGGCTTTGGGCCTGGCCGTGGTGTTTGTTCTGGTCGGGCTTATCAAGGACCGCGCTT TCTTTAAAGAGTTCTTCACCATGAAGACCACCAAAGAAGGCATGAGCATGGGGATGCTGATCCTTCTGTTGTTGGCTGTC TTGGGGGCTGTGAACTATATCGGTGCCCGTCACACTAAGACCTGGGATTTTTCTTCTGCACGGGTCAATACTTTGTCGGA GCAATCCATCAAGCTTGTTAAAAGCCTGGATTCAGACCTGAAGGTTTATTTCTTCTATAAAAAAGGTGTTGAGGGCAACG AAGAAAACCGCCGCCTGTTCCGTGAGCTGATCAAAAAGTACCAGGATCACAGCAGCAAGGTGCAGCTGGATTTCGTGGAA GTGAATGAACGCCCGGATTTGGCGCAAGAGTACGGCGTCGACAAGGGCAGTGGTGTGGTGTTCCTGGATTACAAAGGCCG CCGCAACCGCATCGAAAAAATCGACGAGCAGGATTTTACCAGCGCACTTGTAAAGGTCACTCGCGAAAAGAACAAGACAG TTTACTTTACAGTTGGTCACGGTGAAAAAGCTTTGAGCGAAAACAAAGAGGGCTTGGGCCTGGGTTCTTTGAAATCGCTG CTTGAAAACAACCGCTACACAGTGAAAGAGCTTTCCCTGATTCAAAATGCCAAGATTCCTGAAGATGCGGATGTGATCGT GGTGGCGGGCCCGGTTCAGGGCTTCCAGGCTTTTGAAATCGACGCGCTGGAAGGTTACCTGAAAAACGGCGGCAGTCTGT TTTTGGCGATTGAATCCCAGAACACCGCAGGTCTTGAAAAGCTGGTGGCCAAGATGGGTGTGCAGTTTGAAAACAACTAC ATCCTGAATCAGGTCGAAACCGTCATGGGTAAAGGCATCAATCAGGGGCCGACCATGGGTGTGATCTTCTCGATGAACAA CAAGATCACCAAGCCATTTGGACGTTCGGAAGTGACGTTGTTCCGCTATCCGCAGTCTTTGAAAAAGGTGGACATTGTTA AAGGTGTGATCGTGGATGAGCTGGTTTCCACAGCTCCGAATGCGATGGCCTTCCCATCCATGCAGATCCGCGGTGAAGGT CCCGAGGGCACCTATGCTTTGGTGGATGAGGTCAGTGGTAAATGGGCCGGGGATGAAAGTGCCAAGGACTTTACCGCGAT CATCGCCGGGGACGTGGACTTCCTGACCAATCAGATGCTGTATCAGAATCTGAACCGGGATTTAGTGCTGAATTCCATTG CGGCCCTGGCCAAAGAGGAAAATCTGATCAGCATCACGCCGAAAGAGCCTCTGGCGACACAAATGATCCTGACAGAAACC AAGTTTGGTCTTTTCTTGTTTGCTTTCATCATCCCACTTCCTATTCTTTTGTTGGGCACCAGCGTCGGTCTGTGGCTTAG AAGGAGAAATGCGTAA
Upstream 100 bases:
>100_bases CACGGTGCGCTCTAATGCGCTGGTGTTCTTCTTCAGTATTATTGTCCTGTTCTGTTTCCTGGCAGAGCGTGTTGTTGAAT CCTCACGTTGGAGATAAGTC
Downstream 100 bases:
>100_bases TGAAACTCAAAGGGCGTACAATTCTTGTCATCTGTCTGCTGGTTTTTGGGGGTTATGCGGTTTACGACTTCTTCCACGAA AAAAAGATGGAAGAAAAGCG
Product: ABC-type transport system involved in gliding motility
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSKLSKISFLFAGFSLVAMSITRYLLGDWVPFCWLALGLAVVFVLVGLIKDRAFFKEFFTMKTTKEGMSMGMLILLLLAV LGAVNYIGARHTKTWDFSSARVNTLSEQSIKLVKSLDSDLKVYFFYKKGVEGNEENRRLFRELIKKYQDHSSKVQLDFVE VNERPDLAQEYGVDKGSGVVFLDYKGRRNRIEKIDEQDFTSALVKVTREKNKTVYFTVGHGEKALSENKEGLGLGSLKSL LENNRYTVKELSLIQNAKIPEDADVIVVAGPVQGFQAFEIDALEGYLKNGGSLFLAIESQNTAGLEKLVAKMGVQFENNY ILNQVETVMGKGINQGPTMGVIFSMNNKITKPFGRSEVTLFRYPQSLKKVDIVKGVIVDELVSTAPNAMAFPSMQIRGEG PEGTYALVDEVSGKWAGDESAKDFTAIIAGDVDFLTNQMLYQNLNRDLVLNSIAALAKEENLISITPKEPLATQMILTET KFGLFLFAFIIPLPILLLGTSVGLWLRRRNA
Sequences:
>Translated_511_residues MSKLSKISFLFAGFSLVAMSITRYLLGDWVPFCWLALGLAVVFVLVGLIKDRAFFKEFFTMKTTKEGMSMGMLILLLLAV LGAVNYIGARHTKTWDFSSARVNTLSEQSIKLVKSLDSDLKVYFFYKKGVEGNEENRRLFRELIKKYQDHSSKVQLDFVE VNERPDLAQEYGVDKGSGVVFLDYKGRRNRIEKIDEQDFTSALVKVTREKNKTVYFTVGHGEKALSENKEGLGLGSLKSL LENNRYTVKELSLIQNAKIPEDADVIVVAGPVQGFQAFEIDALEGYLKNGGSLFLAIESQNTAGLEKLVAKMGVQFENNY ILNQVETVMGKGINQGPTMGVIFSMNNKITKPFGRSEVTLFRYPQSLKKVDIVKGVIVDELVSTAPNAMAFPSMQIRGEG PEGTYALVDEVSGKWAGDESAKDFTAIIAGDVDFLTNQMLYQNLNRDLVLNSIAALAKEENLISITPKEPLATQMILTET KFGLFLFAFIIPLPILLLGTSVGLWLRRRNA >Mature_510_residues SKLSKISFLFAGFSLVAMSITRYLLGDWVPFCWLALGLAVVFVLVGLIKDRAFFKEFFTMKTTKEGMSMGMLILLLLAVL GAVNYIGARHTKTWDFSSARVNTLSEQSIKLVKSLDSDLKVYFFYKKGVEGNEENRRLFRELIKKYQDHSSKVQLDFVEV NERPDLAQEYGVDKGSGVVFLDYKGRRNRIEKIDEQDFTSALVKVTREKNKTVYFTVGHGEKALSENKEGLGLGSLKSLL ENNRYTVKELSLIQNAKIPEDADVIVVAGPVQGFQAFEIDALEGYLKNGGSLFLAIESQNTAGLEKLVAKMGVQFENNYI LNQVETVMGKGINQGPTMGVIFSMNNKITKPFGRSEVTLFRYPQSLKKVDIVKGVIVDELVSTAPNAMAFPSMQIRGEGP EGTYALVDEVSGKWAGDESAKDFTAIIAGDVDFLTNQMLYQNLNRDLVLNSIAALAKEENLISITPKEPLATQMILTETK FGLFLFAFIIPLPILLLGTSVGLWLRRRNA
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56914; Mature: 56783
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSKISFLFAGFSLVAMSITRYLLGDWVPFCWLALGLAVVFVLVGLIKDRAFFKEFFT CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKTTKEGMSMGMLILLLLAVLGAVNYIGARHTKTWDFSSARVNTLSEQSIKLVKSLDSDL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC KVYFFYKKGVEGNEENRRLFRELIKKYQDHSSKVQLDFVEVNERPDLAQEYGVDKGSGVV EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHCCCCCCCEE FLDYKGRRNRIEKIDEQDFTSALVKVTREKNKTVYFTVGHGEKALSENKEGLGLGSLKSL EEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHH LENNRYTVKELSLIQNAKIPEDADVIVVAGPVQGFQAFEIDALEGYLKNGGSLFLAIESQ HHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEEEECC NTAGLEKLVAKMGVQFENNYILNQVETVMGKGINQGPTMGVIFSMNNKITKPFGRSEVTL CCHHHHHHHHHHCCEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEE FRYPQSLKKVDIVKGVIVDELVSTAPNAMAFPSMQIRGEGPEGTYALVDEVSGKWAGDES EECCHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCHHHCCCCCCCCCCCC AKDFTAIIAGDVDFLTNQMLYQNLNRDLVLNSIAALAKEENLISITPKEPLATQMILTET CCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH KFGLFLFAFIIPLPILLLGTSVGLWLRRRNA HHHHHHHHHHHHHHHHHHHCCHHHHEEECCC >Mature Secondary Structure SKLSKISFLFAGFSLVAMSITRYLLGDWVPFCWLALGLAVVFVLVGLIKDRAFFKEFFT CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKTTKEGMSMGMLILLLLAVLGAVNYIGARHTKTWDFSSARVNTLSEQSIKLVKSLDSDL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC KVYFFYKKGVEGNEENRRLFRELIKKYQDHSSKVQLDFVEVNERPDLAQEYGVDKGSGVV EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHCCCCCCCEE FLDYKGRRNRIEKIDEQDFTSALVKVTREKNKTVYFTVGHGEKALSENKEGLGLGSLKSL EEECCCCCCHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCHHHHHHH LENNRYTVKELSLIQNAKIPEDADVIVVAGPVQGFQAFEIDALEGYLKNGGSLFLAIESQ HHCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHCCCCEEEEEEECC NTAGLEKLVAKMGVQFENNYILNQVETVMGKGINQGPTMGVIFSMNNKITKPFGRSEVTL CCHHHHHHHHHHCCEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEE FRYPQSLKKVDIVKGVIVDELVSTAPNAMAFPSMQIRGEGPEGTYALVDEVSGKWAGDES EECCHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCHHHCCCCCCCCCCCC AKDFTAIIAGDVDFLTNQMLYQNLNRDLVLNSIAALAKEENLISITPKEPLATQMILTET CCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH KFGLFLFAFIIPLPILLLGTSVGLWLRRRNA HHHHHHHHHHHHHHHHHHHCCHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA