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The map label for this gene is 42522554

Identifier: 42522554

GI number: 42522554

Start: 937260

End: 938849

Strand: Direct

Name: 42522554

Synonym: Bd0993

Alternate gene names: NA

Gene position: 937260-938849 (Clockwise)

Preceding gene: 42522551

Following gene: 42522555

Centisome position: 24.78

GC content: 48.99

Gene sequence:

>1590_bases
ATGTCCAAAAGAAAACTGATCGCAAAGGGCCTTGTGACTTTGTCTTTGTTTACCCAGCATTTTGCCTGGGCGCAAACAAC
CACCACAGTTAAAAGACCACCACAATTTGTGATGTTTGCTTTTGATGGATCTTACAACAACGAGGTTTGGCAGTACTCCC
GTGATTACACCAAACTTAGAAAAGATGCGGGCGTGGACACACGTTTCACATTCTTTATCAATCCGGTTTATTTCCTAAGC
CCTGAAAACAAAACCTTCTATCAACCACCGGGTCAACGTTTGATCCTGGATGGTGCTGGCAACGAAGTGGCTACGAAAAA
CCGTGGTTCTGCTATCGGTTGGGGCGATGACAGACGTGATATCTCTGATCGTATTGATCAGATGAATGCGGCTTACCGTG
AAGGCCATGAAATCGGCTCCCACGCCGTGGGTCACTTTGACGGTGGTTTCCGCAATAAAAAATGGGACCTGCGCTGGAGC
GAGGCGGACTGGAAATCTGAGTTCACTCAATTCTATGCAATCCTGGATCGCGTGTTTGACCTGAACGGCATCTCTAAAAA
AGAATCCAAAGGTTTGTTGTTCAGAAACGAAATCACGGGTTTCCGTGCTCCGGTTCTGGGTGTCAGCCCGGGCTTGTGGC
CGAATCTGCCTAAGTTCGGCATTCAGTACGACACGTCCAAACTGAATTTCGTAAACTACTGGCCACAAAGAAATGAATTC
GGCACCTGGAACTTCCCATTGGCGGAAGTGCCGGAACCAGGTGGCGCGCGCAAGTGGATCTCTATGGATTATAACTTCTG
CGTTCGTGATTCAGCCCGCGTGTTGAAGGAAGAACCTCAAACAATGCAGATCATGAAGCGTGACAAGAACGGCAACACCG
TGAAAGCCAACAAAGCCCGTGACTGCTTGAACGAAGTATCCACGGCGCAAAAAGCACAGGTTAAAGCCAACATGCTTTCA
ATCTATCGCAGCTACTTCAACAACAACTACTATGGCAACCGTGCTCCGGTTCACATCGGCCACCACTTCTCCAAATGGAT
GAGCGGTGCTTACATGGAAGCTTTCTTTGAGTTTGCCAATGAAGTGTGCTCCAAGCCAGAAGTGAAATGCGGTACTTACA
ATGAGCTTCAGGCCTTCATGGAGAAGTCCTCTGCATCTGAAATCGAAGCGTACAGAAAAGGCACTTTTGCGAAACTTCCG
CGTCCTAAGTCGGCAAGTGTTGCTCGCCACCTGGATCTGAAGATCGATATGACTTCTGACGCTAACTTCATGAACATCTC
CCTTGCGGGTCGTGATGCTCAGATGGCGGGTCTTAAGAAGTTCGTGACGGTGGGTGATGTGACCAAAGAAATTGACGGCA
CGATCGACCTGAAAGACATCCGTGAAGTGAGCGAGGCGGGTCAAGACGCTTTGGTTCGCATCTCGGTTGAAAACCGCATG
AACAAAGAAATCGCCACGGCGACTTACACTGTGAAAGCGGTAGGCACTCAAAACGAAGTTGTGGACTCTGAAAACGTGGA
AGGTCGTTGGGAACAAGGCCACATGGCTGAAGCTCACCGCGATGACGTAGACTTCACTAAAGGACACTAA

Upstream 100 bases:

>100_bases
TTCAATCTTTGGACAGCTTTTAAGGCTCAAACCCCGTGATTTCGCGGGCATAGCCGTTGCAATCACCCTTATTGAATATA
AAAACAATACGGAGGATTCC

Downstream 100 bases:

>100_bases
TGAAACTGTGGAAGGCCGCCCTTGCCGGGGCCCTTATCATGAATCTTGTCGGGTGCGGAGGTGACTCTGCACCTTCGGCA
TTTGTAAACACTGATGGGAC

Product: putative secreted protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase; Lipoprotein

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSKRKLIAKGLVTLSLFTQHFAWAQTTTTVKRPPQFVMFAFDGSYNNEVWQYSRDYTKLRKDAGVDTRFTFFINPVYFLS
PENKTFYQPPGQRLILDGAGNEVATKNRGSAIGWGDDRRDISDRIDQMNAAYREGHEIGSHAVGHFDGGFRNKKWDLRWS
EADWKSEFTQFYAILDRVFDLNGISKKESKGLLFRNEITGFRAPVLGVSPGLWPNLPKFGIQYDTSKLNFVNYWPQRNEF
GTWNFPLAEVPEPGGARKWISMDYNFCVRDSARVLKEEPQTMQIMKRDKNGNTVKANKARDCLNEVSTAQKAQVKANMLS
IYRSYFNNNYYGNRAPVHIGHHFSKWMSGAYMEAFFEFANEVCSKPEVKCGTYNELQAFMEKSSASEIEAYRKGTFAKLP
RPKSASVARHLDLKIDMTSDANFMNISLAGRDAQMAGLKKFVTVGDVTKEIDGTIDLKDIREVSEAGQDALVRISVENRM
NKEIATATYTVKAVGTQNEVVDSENVEGRWEQGHMAEAHRDDVDFTKGH

Sequences:

>Translated_529_residues
MSKRKLIAKGLVTLSLFTQHFAWAQTTTTVKRPPQFVMFAFDGSYNNEVWQYSRDYTKLRKDAGVDTRFTFFINPVYFLS
PENKTFYQPPGQRLILDGAGNEVATKNRGSAIGWGDDRRDISDRIDQMNAAYREGHEIGSHAVGHFDGGFRNKKWDLRWS
EADWKSEFTQFYAILDRVFDLNGISKKESKGLLFRNEITGFRAPVLGVSPGLWPNLPKFGIQYDTSKLNFVNYWPQRNEF
GTWNFPLAEVPEPGGARKWISMDYNFCVRDSARVLKEEPQTMQIMKRDKNGNTVKANKARDCLNEVSTAQKAQVKANMLS
IYRSYFNNNYYGNRAPVHIGHHFSKWMSGAYMEAFFEFANEVCSKPEVKCGTYNELQAFMEKSSASEIEAYRKGTFAKLP
RPKSASVARHLDLKIDMTSDANFMNISLAGRDAQMAGLKKFVTVGDVTKEIDGTIDLKDIREVSEAGQDALVRISVENRM
NKEIATATYTVKAVGTQNEVVDSENVEGRWEQGHMAEAHRDDVDFTKGH
>Mature_528_residues
SKRKLIAKGLVTLSLFTQHFAWAQTTTTVKRPPQFVMFAFDGSYNNEVWQYSRDYTKLRKDAGVDTRFTFFINPVYFLSP
ENKTFYQPPGQRLILDGAGNEVATKNRGSAIGWGDDRRDISDRIDQMNAAYREGHEIGSHAVGHFDGGFRNKKWDLRWSE
ADWKSEFTQFYAILDRVFDLNGISKKESKGLLFRNEITGFRAPVLGVSPGLWPNLPKFGIQYDTSKLNFVNYWPQRNEFG
TWNFPLAEVPEPGGARKWISMDYNFCVRDSARVLKEEPQTMQIMKRDKNGNTVKANKARDCLNEVSTAQKAQVKANMLSI
YRSYFNNNYYGNRAPVHIGHHFSKWMSGAYMEAFFEFANEVCSKPEVKCGTYNELQAFMEKSSASEIEAYRKGTFAKLPR
PKSASVARHLDLKIDMTSDANFMNISLAGRDAQMAGLKKFVTVGDVTKEIDGTIDLKDIREVSEAGQDALVRISVENRMN
KEIATATYTVKAVGTQNEVVDSENVEGRWEQGHMAEAHRDDVDFTKGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60243; Mature: 60112

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKLIAKGLVTLSLFTQHFAWAQTTTTVKRPPQFVMFAFDGSYNNEVWQYSRDYTKLR
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
KDAGVDTRFTFFINPVYFLSPENKTFYQPPGQRLILDGAGNEVATKNRGSAIGWGDDRRD
HHCCCCEEEEEEECEEEEECCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH
ISDRIDQMNAAYREGHEIGSHAVGHFDGGFRNKKWDLRWSEADWKSEFTQFYAILDRVFD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHC
LNGISKKESKGLLFRNEITGFRAPVLGVSPGLWPNLPKFGIQYDTSKLNFVNYWPQRNEF
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCC
GTWNFPLAEVPEPGGARKWISMDYNFCVRDSARVLKEEPQTMQIMKRDKNGNTVKANKAR
CCCCCCHHCCCCCCCCCEEEEECCCEEECCHHHHHHCCCHHHHHHHHCCCCCEEECCHHH
DCLNEVSTAQKAQVKANMLSIYRSYFNNNYYGNRAPVHIGHHFSKWMSGAYMEAFFEFAN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHH
EVCSKPEVKCGTYNELQAFMEKSSASEIEAYRKGTFAKLPRPKSASVARHLDLKIDMTSD
HHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHCCCCCCCCCHHEEEEEEEEECCC
ANFMNISLAGRDAQMAGLKKFVTVGDVTKEIDGTIDLKDIREVSEAGQDALVRISVENRM
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEHHCC
NKEIATATYTVKAVGTQNEVVDSENVEGRWEQGHMAEAHRDDVDFTKGH
CCHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure 
SKRKLIAKGLVTLSLFTQHFAWAQTTTTVKRPPQFVMFAFDGSYNNEVWQYSRDYTKLR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
KDAGVDTRFTFFINPVYFLSPENKTFYQPPGQRLILDGAGNEVATKNRGSAIGWGDDRRD
HHCCCCEEEEEEECEEEEECCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHH
ISDRIDQMNAAYREGHEIGSHAVGHFDGGFRNKKWDLRWSEADWKSEFTQFYAILDRVFD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHC
LNGISKKESKGLLFRNEITGFRAPVLGVSPGLWPNLPKFGIQYDTSKLNFVNYWPQRNEF
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCC
GTWNFPLAEVPEPGGARKWISMDYNFCVRDSARVLKEEPQTMQIMKRDKNGNTVKANKAR
CCCCCCHHCCCCCCCCCEEEEECCCEEECCHHHHHHCCCHHHHHHHHCCCCCEEECCHHH
DCLNEVSTAQKAQVKANMLSIYRSYFNNNYYGNRAPVHIGHHFSKWMSGAYMEAFFEFAN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHH
EVCSKPEVKCGTYNELQAFMEKSSASEIEAYRKGTFAKLPRPKSASVARHLDLKIDMTSD
HHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHCCCCCCCCCHHEEEEEEEEECCC
ANFMNISLAGRDAQMAGLKKFVTVGDVTKEIDGTIDLKDIREVSEAGQDALVRISVENRM
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEHHCC
NKEIATATYTVKAVGTQNEVVDSENVEGRWEQGHMAEAHRDDVDFTKGH
CCHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA