| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is aat [H]
Identifier: 42522551
GI number: 42522551
Start: 935164
End: 935829
Strand: Direct
Name: aat [H]
Synonym: Bd0990
Alternate gene names: 42522551
Gene position: 935164-935829 (Clockwise)
Preceding gene: 42522550
Following gene: 42522554
Centisome position: 24.72
GC content: 53.45
Gene sequence:
>666_bases ATGCAGGGGAAGTTGCGATCTTCAGTGGACTTTCCCGATCCGCGCGAAACTCTGGCCGAAGGAATTCTGGCCATTGGCGG ATCTTTGGATGTGGGCACGCTTTACACGGCCTACAGCAAGGGTATCTTCCCGTGGCCTCAGCCGGGGCTGCCGATGCTGT GGTTTTCTCCGGAAGAACGGGGCGTGCTGGAGTTTCGTGATTTCCACGTGCCGGAAAGTCTGCGCCGCTTTCGCAAGCGT CATCCGGAAATTCATTTTTCAGTGAATCAGGATTTTCATCATGTGCTGGAGGAATGCTCCAAGCAGCCTCGTCCCGGTCA GGATGGCACCTGGATCACGGCGCAGATGAAACGCGCCTACCTGGAATTCTTCAAGGCCGGTTATTGTATGTCTGTGGAGG TCCGCGAAAACAACGTTTTGATCGGCGGCATCTATGGTGTGCTGGTCGAAGGCGTGTTTAGCGGTGAAAGCATGTTCTAT CGAAAGCCCAATGCTTCAAAACTGGCACTGTGGAGGCTGGTGGAAGTGTTGTCAGAGCAGGGACATGAATGGATCGATGT GCAGATGGTGACGCCCGTGGTGGCCAGTATGGGCGGGAAGCTGATTGATCGGGAGCAGTATCTGGAAATGTTAGAACAAC GACACTTTCAATATGAAACAACCTAA
Upstream 100 bases:
>100_bases GGGGCCGTCCGGTTGACGTGGAAGTTCTGCCCGATGGGGCGATGCTGATTTCTGATGACAAGGCGGGCGTGATTTACCGT CTGACGTACAAGGTAAAATA
Downstream 100 bases:
>100_bases AAAGGTTCCCGGTTCAAAAAAGAACCGGGAACCTTTTGATTTATTCCAGAACGACTTTGGAAGCCTTGCCGTCTTTGATT TCGTAAACGGTCGCCGGGCC
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQGKLRSSVDFPDPRETLAEGILAIGGSLDVGTLYTAYSKGIFPWPQPGLPMLWFSPEERGVLEFRDFHVPESLRRFRKR HPEIHFSVNQDFHHVLEECSKQPRPGQDGTWITAQMKRAYLEFFKAGYCMSVEVRENNVLIGGIYGVLVEGVFSGESMFY RKPNASKLALWRLVEVLSEQGHEWIDVQMVTPVVASMGGKLIDREQYLEMLEQRHFQYETT
Sequences:
>Translated_221_residues MQGKLRSSVDFPDPRETLAEGILAIGGSLDVGTLYTAYSKGIFPWPQPGLPMLWFSPEERGVLEFRDFHVPESLRRFRKR HPEIHFSVNQDFHHVLEECSKQPRPGQDGTWITAQMKRAYLEFFKAGYCMSVEVRENNVLIGGIYGVLVEGVFSGESMFY RKPNASKLALWRLVEVLSEQGHEWIDVQMVTPVVASMGGKLIDREQYLEMLEQRHFQYETT >Mature_221_residues MQGKLRSSVDFPDPRETLAEGILAIGGSLDVGTLYTAYSKGIFPWPQPGLPMLWFSPEERGVLEFRDFHVPESLRRFRKR HPEIHFSVNQDFHHVLEECSKQPRPGQDGTWITAQMKRAYLEFFKAGYCMSVEVRENNVLIGGIYGVLVEGVFSGESMFY RKPNASKLALWRLVEVLSEQGHEWIDVQMVTPVVASMGGKLIDREQYLEMLEQRHFQYETT
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=210, Percent_Identity=41.4285714285714, Blast_Score=151, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 25458; Mature: 25458
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGKLRSSVDFPDPRETLAEGILAIGGSLDVGTLYTAYSKGIFPWPQPGLPMLWFSPEER CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCC GVLEFRDFHVPESLRRFRKRHPEIHFSVNQDFHHVLEECSKQPRPGQDGTWITAQMKRAY CCEEHHHCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH LEFFKAGYCMSVEVRENNVLIGGIYGVLVEGVFSGESMFYRKPNASKLALWRLVEVLSEQ HHHHHCCCEEEEEEECCCEEEEHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHC GHEWIDVQMVTPVVASMGGKLIDREQYLEMLEQRHFQYETT CCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQGKLRSSVDFPDPRETLAEGILAIGGSLDVGTLYTAYSKGIFPWPQPGLPMLWFSPEER CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCC GVLEFRDFHVPESLRRFRKRHPEIHFSVNQDFHHVLEECSKQPRPGQDGTWITAQMKRAY CCEEHHHCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH LEFFKAGYCMSVEVRENNVLIGGIYGVLVEGVFSGESMFYRKPNASKLALWRLVEVLSEQ HHHHHCCCEEEEEEECCCEEEEHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHC GHEWIDVQMVTPVVASMGGKLIDREQYLEMLEQRHFQYETT CCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA