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The map label for this gene is yrrO [H]

Identifier: 42522492

GI number: 42522492

Start: 875072

End: 877567

Strand: Direct

Name: yrrO [H]

Synonym: Bd0923

Alternate gene names: 42522492

Gene position: 875072-877567 (Clockwise)

Preceding gene: 42522491

Following gene: 42522495

Centisome position: 23.13

GC content: 51.28

Gene sequence:

>2496_bases
ATGGCCGCCATCCATAACGGGGCTGATGCCATTTTCATGGGTGTACCGGGTTTCAATGCCCGCGGGAGAAGCTATGATTT
CCAAATCGAGGAAGTCAAAGAGATCATCGACACCTGCCACCTGTACGGCGTAAAGGTGAATCTGGCCTTCAACATTCTGA
TCTTCCAAAACGAACTGCACAAGGCTGCCGAGACTCTGGAAAAAATTCTTCCGCTAAAACCCGATGCCTTCATCGTTCAG
GATCTGGGCTTGGTGCGTTTGATCCGTCAGATGGCGCCGAATCAGCGCGTGCACGGTTCCACACAGATGAGCATCAGCAA
TGCCGAAGCCATCACCTGGCTTGATGATCTGGGCATACAGCGCTTCGTATTGGCGCGTGAAAACTCGATCAAAGAAATTC
ACTCGATCAAACAAAACACCGACAAAGAAATCGAAGTCTTCGTGCACGGCGCTCTTTGTGTGAGTTATTCCGGTCAGTGT
TTCACATCCGAAGGCATCGGTGGCCGTTCCGCCAACCGCGGTCAGTGCGCTCAAAGCTGCCGCTTCAACTACGAGATGTA
TGTCGATGAAGAAAAGCGTGACCTGGGTGGGAAGTCCTTCCTGGTGTCCCCGCAGGACCTTTGCGGCATCAACGAAGTGC
CAAGCCTGCTGGAGGCCGGTGTGGACTGCTTCAAGGTCGAAGGCCGTTTGAAAACGCCTGAATACGTAGCCACCGCGGCT
CGCAGTTTTGATCAGGCGATTGAGTCGGCACAAAATCATCAGGCCTTGATGAATCCGGTGCTTTTGAAAAAACAAATGGC
CACCGCGTTTTCCCGGGGCTTCTTCAGCGGCTGGTTCCATGGCGTCGATCACCAAAGACTTGTGGAAGGCACATTCAGTG
CCCACCGTGGTTTTGAGTTCGGTAAAGTTGTTCGCGTCAAGGACAGCTCTTTGGAAGTCGAACTGACCGAAGAAAACATC
CAGCAGGGTCTGAAAGCCGACTTCATCCAGGCCGGTGACGGTGTGTTGTGGGTTTATCAGGACCGCAACGGACAAAGCGC
TGAAAAAGGCGGATTCGTTTTCGCCGTAAAATCCCTGAATACCCGCCGTTTTGAATTGGAATTTTCTCGCGACATCAACA
TGAGTGAGCACTTCATGGGTGCTCGTGTGTTCTACAATCACGACAAGGACCTGAAGCGTGACGTGGCTTTGAGCGTGGAA
GACAAGGAAAGAAAGAAGCGTCTTCCTGTGTCTATTCATGCAGAGGCGTCTTTGGGACAGCCTTTGAAGGTCACTTACAC
AGATGGTCGTTACACCGTTTCTGCAACGTCTGCAAACGTCTGTGAGCCTGCGAAATCCAAGGGTTTGAACTCTTTGGACT
TGCGTGAAGAGCTGTTTGCTTTGATGGGAAGCCCGTTCCGCGGGCATGAGTTCACTTGCGAACTGGATGCTTCGACGCCG
TTGTTCCTGCCGGCTCGTCAGGTGAAGGAATTGCGTCAGCAGTTGGTAAAAGAACTGACGGAGCTGCGCATTCAAAATGG
CGCAGCACCAGAACTACTGACCGCCTTGGCGGTTGGTGAATGGATTGAAGGCAACAAGACGGCTGAAAAGGCTGTGCCGG
GTGCCAAGTTGAATCTGCTTCTGCGTGAAAAAGGGCAGGTGGAAGACTTCGTGAACGCCATCAAATCCGGCGATCTGACG
ACAGCGGGATTGAATCTGGTGATCCTGGATTTCGAATTCGGTTTGGATTTTGAGCCCAGCTTGAAGCTGCTGAAAGAAAA
CGGCATCAAGGTGGGTATTGCCACCACCCGTATTTTGAAACCGAATGAACACCGCAATGTGAAGCATCTGTTCAATTTGA
ACCCGGATGCGATCCTGGCCAGAAACCTAGGTGCGGTTCAATGGCTGCAGGCCAATAACTATCAGGGCCAGATCCTGGGT
GACTTCAGCTTGAACGTGACGAACCACCTGACGGCGCAATACCTGCTGAACAAGGGCCTTCACAGCCTTTGCCTGGGCTA
TGACTTAAACAATGTGCAGGTCAGTGAACTGATCCAAGCCGGTCAAGCCGCGCAATTTGAAGTGACGGCTTATCAGTACA
TGCCAAGCTTCCACATGGAGCACTGTGTGTTCGCAGCCTTCCTAAGCAAAGGTTCCAGTTTCAAAGACTGTGGCAAGCCA
TGTGAAAAGCACCAGGTGAAACTGAAAGACCAATTCGGCAACTGGCACCAGATCAAACCCGATCAGGAATGCCGTAATAC
CATGTACAACGGAACGTCCCAGTCGGCGGCCCGCTATGTGAAGGAATGGGAATCTTTGGGCTTGGGTTATATCCGCTATG
AAGCCTTGAAAGAGCGTCACTCCGAGCTGATTACAAAAATTCAGGGCCACTTGGATTTCATCAGCGGTAAAAAGGATCTG
GAGTCTTTGATCAAGGATCTGGGGAACGTGGAAAGTTATGGTTTGTCAGAGAGCCACTTCCAAAGAGAAAAAGAATACCA
AAGTCGTAAGAAGTAA

Upstream 100 bases:

>100_bases
CTTGCGGAAATCCCTGGGGACTGGCTTATTAGCCTGCATGCAAACACAAAGCTTCAAACGTCCTGAATTGTTACTTCCTG
TGGGTACCAAAGAGATGGCT

Downstream 100 bases:

>100_bases
TAAAAAAAGGGAGTCCAAAGACTCCCTTTTTTTATTCAAATTTTGAGCGAAGATATTTTTCGTATTCCCGAAGGACCGAG
TTCATGACCCCTTTTAGGAG

Product: putative collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 831; Mature: 830

Protein sequence:

>831_residues
MAAIHNGADAIFMGVPGFNARGRSYDFQIEEVKEIIDTCHLYGVKVNLAFNILIFQNELHKAAETLEKILPLKPDAFIVQ
DLGLVRLIRQMAPNQRVHGSTQMSISNAEAITWLDDLGIQRFVLARENSIKEIHSIKQNTDKEIEVFVHGALCVSYSGQC
FTSEGIGGRSANRGQCAQSCRFNYEMYVDEEKRDLGGKSFLVSPQDLCGINEVPSLLEAGVDCFKVEGRLKTPEYVATAA
RSFDQAIESAQNHQALMNPVLLKKQMATAFSRGFFSGWFHGVDHQRLVEGTFSAHRGFEFGKVVRVKDSSLEVELTEENI
QQGLKADFIQAGDGVLWVYQDRNGQSAEKGGFVFAVKSLNTRRFELEFSRDINMSEHFMGARVFYNHDKDLKRDVALSVE
DKERKKRLPVSIHAEASLGQPLKVTYTDGRYTVSATSANVCEPAKSKGLNSLDLREELFALMGSPFRGHEFTCELDASTP
LFLPARQVKELRQQLVKELTELRIQNGAAPELLTALAVGEWIEGNKTAEKAVPGAKLNLLLREKGQVEDFVNAIKSGDLT
TAGLNLVILDFEFGLDFEPSLKLLKENGIKVGIATTRILKPNEHRNVKHLFNLNPDAILARNLGAVQWLQANNYQGQILG
DFSLNVTNHLTAQYLLNKGLHSLCLGYDLNNVQVSELIQAGQAAQFEVTAYQYMPSFHMEHCVFAAFLSKGSSFKDCGKP
CEKHQVKLKDQFGNWHQIKPDQECRNTMYNGTSQSAARYVKEWESLGLGYIRYEALKERHSELITKIQGHLDFISGKKDL
ESLIKDLGNVESYGLSESHFQREKEYQSRKK

Sequences:

>Translated_831_residues
MAAIHNGADAIFMGVPGFNARGRSYDFQIEEVKEIIDTCHLYGVKVNLAFNILIFQNELHKAAETLEKILPLKPDAFIVQ
DLGLVRLIRQMAPNQRVHGSTQMSISNAEAITWLDDLGIQRFVLARENSIKEIHSIKQNTDKEIEVFVHGALCVSYSGQC
FTSEGIGGRSANRGQCAQSCRFNYEMYVDEEKRDLGGKSFLVSPQDLCGINEVPSLLEAGVDCFKVEGRLKTPEYVATAA
RSFDQAIESAQNHQALMNPVLLKKQMATAFSRGFFSGWFHGVDHQRLVEGTFSAHRGFEFGKVVRVKDSSLEVELTEENI
QQGLKADFIQAGDGVLWVYQDRNGQSAEKGGFVFAVKSLNTRRFELEFSRDINMSEHFMGARVFYNHDKDLKRDVALSVE
DKERKKRLPVSIHAEASLGQPLKVTYTDGRYTVSATSANVCEPAKSKGLNSLDLREELFALMGSPFRGHEFTCELDASTP
LFLPARQVKELRQQLVKELTELRIQNGAAPELLTALAVGEWIEGNKTAEKAVPGAKLNLLLREKGQVEDFVNAIKSGDLT
TAGLNLVILDFEFGLDFEPSLKLLKENGIKVGIATTRILKPNEHRNVKHLFNLNPDAILARNLGAVQWLQANNYQGQILG
DFSLNVTNHLTAQYLLNKGLHSLCLGYDLNNVQVSELIQAGQAAQFEVTAYQYMPSFHMEHCVFAAFLSKGSSFKDCGKP
CEKHQVKLKDQFGNWHQIKPDQECRNTMYNGTSQSAARYVKEWESLGLGYIRYEALKERHSELITKIQGHLDFISGKKDL
ESLIKDLGNVESYGLSESHFQREKEYQSRKK
>Mature_830_residues
AAIHNGADAIFMGVPGFNARGRSYDFQIEEVKEIIDTCHLYGVKVNLAFNILIFQNELHKAAETLEKILPLKPDAFIVQD
LGLVRLIRQMAPNQRVHGSTQMSISNAEAITWLDDLGIQRFVLARENSIKEIHSIKQNTDKEIEVFVHGALCVSYSGQCF
TSEGIGGRSANRGQCAQSCRFNYEMYVDEEKRDLGGKSFLVSPQDLCGINEVPSLLEAGVDCFKVEGRLKTPEYVATAAR
SFDQAIESAQNHQALMNPVLLKKQMATAFSRGFFSGWFHGVDHQRLVEGTFSAHRGFEFGKVVRVKDSSLEVELTEENIQ
QGLKADFIQAGDGVLWVYQDRNGQSAEKGGFVFAVKSLNTRRFELEFSRDINMSEHFMGARVFYNHDKDLKRDVALSVED
KERKKRLPVSIHAEASLGQPLKVTYTDGRYTVSATSANVCEPAKSKGLNSLDLREELFALMGSPFRGHEFTCELDASTPL
FLPARQVKELRQQLVKELTELRIQNGAAPELLTALAVGEWIEGNKTAEKAVPGAKLNLLLREKGQVEDFVNAIKSGDLTT
AGLNLVILDFEFGLDFEPSLKLLKENGIKVGIATTRILKPNEHRNVKHLFNLNPDAILARNLGAVQWLQANNYQGQILGD
FSLNVTNHLTAQYLLNKGLHSLCLGYDLNNVQVSELIQAGQAAQFEVTAYQYMPSFHMEHCVFAAFLSKGSSFKDCGKPC
EKHQVKLKDQFGNWHQIKPDQECRNTMYNGTSQSAARYVKEWESLGLGYIRYEALKERHSELITKIQGHLDFISGKKDLE
SLIKDLGNVESYGLSESHFQREKEYQSRKK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=324, Percent_Identity=33.9506172839506, Blast_Score=182, Evalue=1e-46,
Organism=Escherichia coli, GI1788397, Length=406, Percent_Identity=28.5714285714286, Blast_Score=133, Evalue=5e-32,
Organism=Escherichia coli, GI1789548, Length=279, Percent_Identity=27.9569892473118, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 93223; Mature: 93092

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIHNGADAIFMGVPGFNARGRSYDFQIEEVKEIIDTCHLYGVKVNLAFNILIFQNELH
CCCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEEEEEHHHHH
KAAETLEKILPLKPDAFIVQDLGLVRLIRQMAPNQRVHGSTQMSISNAEAITWLDDLGIQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEHHHCCCC
RFVLARENSIKEIHSIKQNTDKEIEVFVHGALCVSYSGQCFTSEGIGGRSANRGQCAQSC
EEEHHHHCHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCEEECCCCCCCCCCCCHHHHHH
RFNYEMYVDEEKRDLGGKSFLVSPQDLCGINEVPSLLEAGVDCFKVEGRLKTPEYVATAA
CCCEEEEECCHHHCCCCCEEEECCHHHCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
RSFDQAIESAQNHQALMNPVLLKKQMATAFSRGFFSGWFHGVDHQRLVEGTFSAHRGFEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
GKVVRVKDSSLEVELTEENIQQGLKADFIQAGDGVLWVYQDRNGQSAEKGGFVFAVKSLN
CCEEEEECCCEEEEEEHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCC
TRRFELEFSRDINMSEHFMGARVFYNHDKDLKRDVALSVEDKERKKRLPVSIHAEASLGQ
CEEEEEEECCCCCCHHHHCCEEEEECCCCHHHHHEEECCCCHHHHCCCCEEEEECCCCCC
PLKVTYTDGRYTVSATSANVCEPAKSKGLNSLDLREELFALMGSPFRGHEFTCELDASTP
CEEEEEECCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC
LFLPARQVKELRQQLVKELTELRIQNGAAPELLTALAVGEWIEGNKTAEKAVPGAKLNLL
CEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEE
LREKGQVEDFVNAIKSGDLTTAGLNLVILDFEFGLDFEPSLKLLKENGIKVGIATTRILK
ECCCCCHHHHHHHHHCCCCEECCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEEEEC
PNEHRNVKHLFNLNPDAILARNLGAVQWLQANNYQGQILGDFSLNVTNHLTAQYLLNKGL
CCCCCCHHHHCCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEEECHHHHHHHHHHHHHCH
HSLCLGYDLNNVQVSELIQAGQAAQFEVTAYQYMPSFHMEHCVFAAFLSKGSSFKDCGKP
HHHHHCCCCCCCCHHHHHHCCCCCEEEEEHEECCCCHHHHHHHHHHHHHCCCCCHHHCCC
CEKHQVKLKDQFGNWHQIKPDQECRNTMYNGTSQSAARYVKEWESLGLGYIRYEALKERH
HHHHCEEEHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SELITKIQGHLDFISGKKDLESLIKDLGNVESYGLSESHFQREKEYQSRKK
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAIHNGADAIFMGVPGFNARGRSYDFQIEEVKEIIDTCHLYGVKVNLAFNILIFQNELH
CCEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEEEEEHHHHH
KAAETLEKILPLKPDAFIVQDLGLVRLIRQMAPNQRVHGSTQMSISNAEAITWLDDLGIQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEHHHCCCC
RFVLARENSIKEIHSIKQNTDKEIEVFVHGALCVSYSGQCFTSEGIGGRSANRGQCAQSC
EEEHHHHCHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCEEECCCCCCCCCCCCHHHHHH
RFNYEMYVDEEKRDLGGKSFLVSPQDLCGINEVPSLLEAGVDCFKVEGRLKTPEYVATAA
CCCEEEEECCHHHCCCCCEEEECCHHHCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHH
RSFDQAIESAQNHQALMNPVLLKKQMATAFSRGFFSGWFHGVDHQRLVEGTFSAHRGFEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
GKVVRVKDSSLEVELTEENIQQGLKADFIQAGDGVLWVYQDRNGQSAEKGGFVFAVKSLN
CCEEEEECCCEEEEEEHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEECCC
TRRFELEFSRDINMSEHFMGARVFYNHDKDLKRDVALSVEDKERKKRLPVSIHAEASLGQ
CEEEEEEECCCCCCHHHHCCEEEEECCCCHHHHHEEECCCCHHHHCCCCEEEEECCCCCC
PLKVTYTDGRYTVSATSANVCEPAKSKGLNSLDLREELFALMGSPFRGHEFTCELDASTP
CEEEEEECCEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC
LFLPARQVKELRQQLVKELTELRIQNGAAPELLTALAVGEWIEGNKTAEKAVPGAKLNLL
CEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEE
LREKGQVEDFVNAIKSGDLTTAGLNLVILDFEFGLDFEPSLKLLKENGIKVGIATTRILK
ECCCCCHHHHHHHHHCCCCEECCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEEEEC
PNEHRNVKHLFNLNPDAILARNLGAVQWLQANNYQGQILGDFSLNVTNHLTAQYLLNKGL
CCCCCCHHHHCCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEEECHHHHHHHHHHHHHCH
HSLCLGYDLNNVQVSELIQAGQAAQFEVTAYQYMPSFHMEHCVFAAFLSKGSSFKDCGKP
HHHHHCCCCCCCCHHHHHHCCCCCEEEEEHEECCCCHHHHHHHHHHHHHCCCCCHHHCCC
CEKHQVKLKDQFGNWHQIKPDQECRNTMYNGTSQSAARYVKEWESLGLGYIRYEALKERH
HHHHCEEEHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SELITKIQGHLDFISGKKDLESLIKDLGNVESYGLSESHFQREKEYQSRKK
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]