Click here to switch to the map view.

The map label for this gene is 42522495

Identifier: 42522495

GI number: 42522495

Start: 879305

End: 880564

Strand: Direct

Name: 42522495

Synonym: Bd0927

Alternate gene names: NA

Gene position: 879305-880564 (Clockwise)

Preceding gene: 42522492

Following gene: 161611326

Centisome position: 23.24

GC content: 52.94

Gene sequence:

>1260_bases
ATGGCGCAAAAAAAGGGCTCCCCCAAGGCTGCATCCACCGTGCTTGATCAGAAGTTCTGGCAGAACTTCGCCAAGAACCA
TTGGGAGAAAAAGCCCCTGGTCGCCCGCAATGTGAAATCCGGCCTGCTGGAGATGACGGATGCCGAGATCTTTGAGCTGT
TGGTGGCCTACAGTGACCGTTGCCGTGAAATGAATGACCCCGAAGGTTTGAAGTTCTTCATTGATGGCGCGAAAGCCGAC
CCGGAAGAAGTTTTAGAGTTGCTGCCGGAAAAGTCCGACAAGTCCTTGTTGGGCTATCACAAACGCATGAACGCCCAGTT
CCCGGATTACTGTCTGGTCTGCGATGAGCTTTTGCAGGTGAATCTGAAAAAGCAGCATCTGTTGCAGGACTTTACCGACG
ATCTTTTCCGTCATGTGGGTTTTCCGAATCGTTTTTCTGAAATCGGTCTTTATCTGGGGAACTATCGCAAGACTCCGTTC
GGGGTTCATGTGGATTCCTGTGGGGTGTTCAGCTTTCCGGTCGCCGGGGTGAAAAGATTCCGTCTGTGGCCCGCAGCTTA
TGGGGATGAACATCCTGAGCTGGATCGCACGTTCAACTATGAAAAGCACAAGAAGCATTCCCAGTTGGTCGAAGTCGGTC
CGGGGGACATGACCTACTGGCCGTCGTCAGAGTGGCACATCGCCGAGTCTGACGGTTCTTTCAGTGCGACCTGGAGCTTG
GGCGTGTGGGTGGATCAGACTCACGGGGATATGTTTGGATCTGCATTGAAAGATTTGGTTGATACGAAGCTGGGGTCTGC
CCGACTGAAGGTCACAACGCCGTTTAAGGCTTTGCATGACAAGTCGGGTGAAGTCGGGGAGCTGCCAAAGATCTATCAGG
ATTCGCTTAAAGCGCTGAAGTCGCTGAGTGCTGCCGAACTTGAAGAGGCGTTCTTGAAATCCTGGATGAAGCACATCTCG
CTTCAAGGATTTAAGACCGTGCCTGTGTCCGCGGTGAAGGTCACAGCAAAATCGCGTTTGCAGCTTCGCAGTGTTCGCTC
GCCCGTGTTGTGGCAGCAGAGTACCGGGAACAAAAAAGCTTTCAGTTTGAGTTATGGTGGGGTTTTGGTTCAGAGCTCTT
CTGCGGGACTTTTGAAGATGGTGAAGGACTTGAATGCCGGGAAGGTGTGTGTGCCGGTTCAGTACCTGAAGATTCAGGGG
GCGAAGCGGGACCTTGGCATGTTGCAAGAGCTGGCGGATGCTGGGGCGTTTCATGCCTGA

Upstream 100 bases:

>100_bases
AAGGGGGTGGCAAATTTACAGGCCGGACCTTCTATTTGACTCCCAGATCAATCTCAACGACTCTGGCGCCTTCAAATTCG
CTCTTAAAACGGAGTATTCC

Downstream 100 bases:

>100_bases
CGCTGCGGGGGCAGGACACAAAAGTGGTCCTGTTGCCCATAAAACAGGCATATTTTCCCGATTTTCCCATGACAGAGGCT
TTCAGCGGGTTTAAATTCTT

Product: putative RNA methylase

Products: NA

Alternate protein names: RNA Methylase

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MAQKKGSPKAASTVLDQKFWQNFAKNHWEKKPLVARNVKSGLLEMTDAEIFELLVAYSDRCREMNDPEGLKFFIDGAKAD
PEEVLELLPEKSDKSLLGYHKRMNAQFPDYCLVCDELLQVNLKKQHLLQDFTDDLFRHVGFPNRFSEIGLYLGNYRKTPF
GVHVDSCGVFSFPVAGVKRFRLWPAAYGDEHPELDRTFNYEKHKKHSQLVEVGPGDMTYWPSSEWHIAESDGSFSATWSL
GVWVDQTHGDMFGSALKDLVDTKLGSARLKVTTPFKALHDKSGEVGELPKIYQDSLKALKSLSAAELEEAFLKSWMKHIS
LQGFKTVPVSAVKVTAKSRLQLRSVRSPVLWQQSTGNKKAFSLSYGGVLVQSSSAGLLKMVKDLNAGKVCVPVQYLKIQG
AKRDLGMLQELADAGAFHA

Sequences:

>Translated_419_residues
MAQKKGSPKAASTVLDQKFWQNFAKNHWEKKPLVARNVKSGLLEMTDAEIFELLVAYSDRCREMNDPEGLKFFIDGAKAD
PEEVLELLPEKSDKSLLGYHKRMNAQFPDYCLVCDELLQVNLKKQHLLQDFTDDLFRHVGFPNRFSEIGLYLGNYRKTPF
GVHVDSCGVFSFPVAGVKRFRLWPAAYGDEHPELDRTFNYEKHKKHSQLVEVGPGDMTYWPSSEWHIAESDGSFSATWSL
GVWVDQTHGDMFGSALKDLVDTKLGSARLKVTTPFKALHDKSGEVGELPKIYQDSLKALKSLSAAELEEAFLKSWMKHIS
LQGFKTVPVSAVKVTAKSRLQLRSVRSPVLWQQSTGNKKAFSLSYGGVLVQSSSAGLLKMVKDLNAGKVCVPVQYLKIQG
AKRDLGMLQELADAGAFHA
>Mature_418_residues
AQKKGSPKAASTVLDQKFWQNFAKNHWEKKPLVARNVKSGLLEMTDAEIFELLVAYSDRCREMNDPEGLKFFIDGAKADP
EEVLELLPEKSDKSLLGYHKRMNAQFPDYCLVCDELLQVNLKKQHLLQDFTDDLFRHVGFPNRFSEIGLYLGNYRKTPFG
VHVDSCGVFSFPVAGVKRFRLWPAAYGDEHPELDRTFNYEKHKKHSQLVEVGPGDMTYWPSSEWHIAESDGSFSATWSLG
VWVDQTHGDMFGSALKDLVDTKLGSARLKVTTPFKALHDKSGEVGELPKIYQDSLKALKSLSAAELEEAFLKSWMKHISL
QGFKTVPVSAVKVTAKSRLQLRSVRSPVLWQQSTGNKKAFSLSYGGVLVQSSSAGLLKMVKDLNAGKVCVPVQYLKIQGA
KRDLGMLQELADAGAFHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46948; Mature: 46817

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKKGSPKAASTVLDQKFWQNFAKNHWEKKPLVARNVKSGLLEMTDAEIFELLVAYSDR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CREMNDPEGLKFFIDGAKADPEEVLELLPEKSDKSLLGYHKRMNAQFPDYCLVCDELLQV
HHCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC
NLKKQHLLQDFTDDLFRHVGFPNRFSEIGLYLGNYRKTPFGVHVDSCGVFSFPVAGVKRF
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHH
RLWPAAYGDEHPELDRTFNYEKHKKHSQLVEVGPGDMTYWPSSEWHIAESDGSFSATWSL
EECCHHCCCCCCCCCCCCCCHHHHHHHHHEECCCCCEEECCCCCCEEECCCCCEEEEEEE
GVWVDQTHGDMFGSALKDLVDTKLGSARLKVTTPFKALHDKSGEVGELPKIYQDSLKALK
EEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHH
SLSAAELEEAFLKSWMKHISLQGFKTVPVSAVKVTAKSRLQLRSVRSPVLWQQSTGNKKA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHHHHHHHHCCCCEEECCCCCCEE
FSLSYGGVLVQSSSAGLLKMVKDLNAGKVCVPVQYLKIQGAKRDLGMLQELADAGAFHA
EEEEECCEEEECCCCHHHHHHHHCCCCCEEEEEHEEEECCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AQKKGSPKAASTVLDQKFWQNFAKNHWEKKPLVARNVKSGLLEMTDAEIFELLVAYSDR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CREMNDPEGLKFFIDGAKADPEEVLELLPEKSDKSLLGYHKRMNAQFPDYCLVCDELLQV
HHCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHC
NLKKQHLLQDFTDDLFRHVGFPNRFSEIGLYLGNYRKTPFGVHVDSCGVFSFPVAGVKRF
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHH
RLWPAAYGDEHPELDRTFNYEKHKKHSQLVEVGPGDMTYWPSSEWHIAESDGSFSATWSL
EECCHHCCCCCCCCCCCCCCHHHHHHHHHEECCCCCEEECCCCCCEEECCCCCEEEEEEE
GVWVDQTHGDMFGSALKDLVDTKLGSARLKVTTPFKALHDKSGEVGELPKIYQDSLKALK
EEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHH
SLSAAELEEAFLKSWMKHISLQGFKTVPVSAVKVTAKSRLQLRSVRSPVLWQQSTGNKKA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHHHHHHHHHHCCCCEEECCCCCCEE
FSLSYGGVLVQSSSAGLLKMVKDLNAGKVCVPVQYLKIQGAKRDLGMLQELADAGAFHA
EEEEECCEEEECCCCHHHHHHHHCCCCCEEEEEHEEEECCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA