| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is yeeZ [H]
Identifier: 42522481
GI number: 42522481
Start: 862397
End: 863116
Strand: Direct
Name: yeeZ [H]
Synonym: Bd0911
Alternate gene names: 42522481
Gene position: 862397-863116 (Clockwise)
Preceding gene: 42522480
Following gene: 42522482
Centisome position: 22.8
GC content: 50.56
Gene sequence:
>720_bases GTGGTGAAACAAACGTGGGGCATCATTGGCTTGGGTTGGTTGGGGCAGAAGCTTTCTGAACACTTAAGTCAAAAAGGCAT CGAAAACTGGGGCACCCGCAGTCAGGATTTTGACTGGGGTTGTGATGATTTTCCGACCAAACCCTGTGATGTGCTTTTTC TGAATACACCGCCGCTGTTGCAAATCAATCCTGAAAACTTTGTTGCCAAAATTCCGACAGGTGGTTATCGCCGGATTATT TTTATCAGTTCGATTTCCGTGTATGGCAATCAAGCCGGCAGCATCACTGAACAAACAACGACTGAGCCCATGACAGACAG TGCGCGTTGGTTGGTGGCTGTGGAAAATCTTTTAAGTGAGAAGTTCACCGGTAAACTGACGGTGATTCGTCCCGGGGGTT TGGTTGGTGGCGACCGGCACCCTGCCAAAAGTTTGTCGCAGAGTCAGCGGCCTTGCGCTGGGAATTCAGCCGTGAATCTG ATTCACCGTGACGATCTGGTGCAGATCATCTGGGCGGCGGCTCAGGCAGAATCAGCCTGGCCTGTCATTAATGCTGTGAC GCCATTTCATCCTGCAAAAAAAGAATACTACGGCGAGTGGACGGCCGCGCGGGGAATGGCTCCTGTTTTATTTACTGATA CACAAGAGCCTTCCAAGATTGTGCGCTCGGATGTTCTTCCCAAGATTTATTCAAGCTGGCTTCGTCCGCGTTTGGACTGA
Upstream 100 bases:
>100_bases ACGCTCTAAGTTCCGGGTGATTGATCATTGCGGGCATTATGTGCCGTTGGAACAGCCAGCCGAACTGGGTCAAGCCGTTC TTGATTTTGTCGGGCGGTGA
Downstream 100 bases:
>100_bases TTGGTTTTTCAGCAGCACTGCCGATAGATTTGGCAGTTCCGTGTTTTTATTAGCGATGACATCGGAGGCGTGGTAAAGGG ATTGCCTCTTATGCATCATG
Product: putative enzyme of sugar metabolism
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MVKQTWGIIGLGWLGQKLSEHLSQKGIENWGTRSQDFDWGCDDFPTKPCDVLFLNTPPLLQINPENFVAKIPTGGYRRII FISSISVYGNQAGSITEQTTTEPMTDSARWLVAVENLLSEKFTGKLTVIRPGGLVGGDRHPAKSLSQSQRPCAGNSAVNL IHRDDLVQIIWAAAQAESAWPVINAVTPFHPAKKEYYGEWTAARGMAPVLFTDTQEPSKIVRSDVLPKIYSSWLRPRLD
Sequences:
>Translated_239_residues MVKQTWGIIGLGWLGQKLSEHLSQKGIENWGTRSQDFDWGCDDFPTKPCDVLFLNTPPLLQINPENFVAKIPTGGYRRII FISSISVYGNQAGSITEQTTTEPMTDSARWLVAVENLLSEKFTGKLTVIRPGGLVGGDRHPAKSLSQSQRPCAGNSAVNL IHRDDLVQIIWAAAQAESAWPVINAVTPFHPAKKEYYGEWTAARGMAPVLFTDTQEPSKIVRSDVLPKIYSSWLRPRLD >Mature_239_residues MVKQTWGIIGLGWLGQKLSEHLSQKGIENWGTRSQDFDWGCDDFPTKPCDVLFLNTPPLLQINPENFVAKIPTGGYRRII FISSISVYGNQAGSITEQTTTEPMTDSARWLVAVENLLSEKFTGKLTVIRPGGLVGGDRHPAKSLSQSQRPCAGNSAVNL IHRDDLVQIIWAAAQAESAWPVINAVTPFHPAKKEYYGEWTAARGMAPVLFTDTQEPSKIVRSDVLPKIYSSWLRPRLD
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788327, Length=249, Percent_Identity=28.1124497991968, Blast_Score=91, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: NA
Molecular weight: Translated: 26519; Mature: 26519
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKQTWGIIGLGWLGQKLSEHLSQKGIENWGTRSQDFDWGCDDFPTKPCDVLFLNTPPLL CCCCCCCEEEHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE QINPENFVAKIPTGGYRRIIFISSISVYGNQAGSITEQTTTEPMTDSARWLVAVENLLSE EECCCCEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH KFTGKLTVIRPGGLVGGDRHPAKSLSQSQRPCAGNSAVNLIHRDDLVQIIWAAAQAESAW HHCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCCC PVINAVTPFHPAKKEYYGEWTAARGMAPVLFTDTQEPSKIVRSDVLPKIYSSWLRPRLD CEEECCCCCCCCHHHHCCCHHHHCCCCCEEEECCCCHHHHHHHHCCHHHHHHHCCCCCC >Mature Secondary Structure MVKQTWGIIGLGWLGQKLSEHLSQKGIENWGTRSQDFDWGCDDFPTKPCDVLFLNTPPLL CCCCCCCEEEHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEE QINPENFVAKIPTGGYRRIIFISSISVYGNQAGSITEQTTTEPMTDSARWLVAVENLLSE EECCCCEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH KFTGKLTVIRPGGLVGGDRHPAKSLSQSQRPCAGNSAVNLIHRDDLVQIIWAAAQAESAW HHCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCCC PVINAVTPFHPAKKEYYGEWTAARGMAPVLFTDTQEPSKIVRSDVLPKIYSSWLRPRLD CEEECCCCCCCCHHHHCCCHHHHCCCCCEEEECCCCHHHHHHHHCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]