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The map label for this gene is PSrp-1

Identifier: 42522420

GI number: 42522420

Start: 794773

End: 795123

Strand: Direct

Name: PSrp-1

Synonym: Bd0848

Alternate gene names: NA

Gene position: 794773-795123 (Clockwise)

Preceding gene: 42522419

Following gene: 42522421

Centisome position: 21.01

GC content: 47.01

Gene sequence:

>351_bases
ATGAAACTCAACTACACCTTTAAGCATCTGGACCACTCTGAATCCCTTGAGACCTACACAGAAGAAAGAATGGCCGAGGT
GGGGCGCTTCCTGCTTAGAGAAGGTTACGGCAACGTGTATTTCAGTAAGGTAAAAAATGAATTCTGCGTTGAGATCTCCG
TGAACACCCGCGAAAAATATTTCAAGGCGACTGCATACGGTCCTGATGTCTATGGTGCTGTGGACGCATGTGCCGAAAAA
ATGGAGAAACAGTTTTTGAAGACCAACAAGCAATACAAGGATCACAAAAAGCCAGAACTCACCAAGGGAGCACGTCAGGA
GACGTTCTCACGCTGGAAAAAGGCGGCGTGA

Upstream 100 bases:

>100_bases
CAAATGAGTCTCAAAATAGGGCTCATCTTTAGTCCGGCTGGACCGATAAGAAGTCCAGCAAGCAATCAAAGGCCTTGAAA
GGGGCTGAGAAGGAGAAAAC

Downstream 100 bases:

>100_bases
TTTTCGTGCAAATTTTCTGATCCGCGATTATACTAAGGAGGTGGAATTATCCACCTCTTGTATTTTGGAACGTTGCTTGG
AACAGGAAGAACAGATTCAT

Product: ribosome-associated protein Y

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKLNYTFKHLDHSESLETYTEERMAEVGRFLLREGYGNVYFSKVKNEFCVEISVNTREKYFKATAYGPDVYGAVDACAEK
MEKQFLKTNKQYKDHKKPELTKGARQETFSRWKKAA

Sequences:

>Translated_116_residues
MKLNYTFKHLDHSESLETYTEERMAEVGRFLLREGYGNVYFSKVKNEFCVEISVNTREKYFKATAYGPDVYGAVDACAEK
MEKQFLKTNKQYKDHKKPELTKGARQETFSRWKKAA
>Mature_116_residues
MKLNYTFKHLDHSESLETYTEERMAEVGRFLLREGYGNVYFSKVKNEFCVEISVNTREKYFKATAYGPDVYGAVDACAEK
MEKQFLKTNKQYKDHKKPELTKGARQETFSRWKKAA

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13653; Mature: 13653

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNYTFKHLDHSESLETYTEERMAEVGRFLLREGYGNVYFSKVKNEFCVEISVNTREKY
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCHHHH
FKATAYGPDVYGAVDACAEKMEKQFLKTNKQYKDHKKPELTKGARQETFSRWKKAA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLNYTFKHLDHSESLETYTEERMAEVGRFLLREGYGNVYFSKVKNEFCVEISVNTREKY
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCHHHH
FKATAYGPDVYGAVDACAEKMEKQFLKTNKQYKDHKKPELTKGARQETFSRWKKAA
HHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA