Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522421

Identifier: 42522421

GI number: 42522421

Start: 795164

End: 795805

Strand: Direct

Name: 42522421

Synonym: Bd0849

Alternate gene names: NA

Gene position: 795164-795805 (Clockwise)

Preceding gene: 42522420

Following gene: 42522422

Centisome position: 21.02

GC content: 51.25

Gene sequence:

>642_bases
GTGGAATTATCCACCTCTTGTATTTTGGAACGTTGCTTGGAACAGGAAGAACAGATTCATTGGGGAACCTCCCTTTTTTC
CCTGGATGTGAAGGAAGACCTGCACGTCCGTCACTATAAATGGCGCCTGCTGCTTCTGATCACGCTTCTTACCGGTCTGC
TGATGTGGACCTACAGCTTCATCTCTTTATTTTTCGTTGAAGATCCGACCCTGGCTCAGATCGGCTTTACCTGCTCGATT
TTGCACGCCCTGTCTCCTTTGGTTTACCGTTGGACCCGCTCCATGCCGGTGGCCGCCTACAACATGGTGATCTCGGGGAT
GGTCTTTCAGTTTTCCTTCTCGTTCTTTACAGGGGGATTTTTCTCTCCGACACTGATCTGGTTTGCGGTGCTGCCGTTGA
TCGTGGGGCTGCTGACCAAACGCTTTCATGCGGTGGTGTGGACCTTTCTTTCTGTCGGGGCCTATATGCTGATGTTCCTG
TTTCAGAACAAGGGCTTGGTGCCGGAATCCTCGATCAGCGAACTGGGGCGCACCCTGGCTCAGTTTATGATTGGCCTGGG
GCTGATCGGCCTGGTTGGAGGCTTTACAGTGTTTTTCCTAGAACTGGCTTATTTTTATCACCACAAACCCAAGGATCCTT
GA

Upstream 100 bases:

>100_bases
CCAGAACTCACCAAGGGAGCACGTCAGGAGACGTTCTCACGCTGGAAAAAGGCGGCGTGATTTTCGTGCAAATTTTCTGA
TCCGCGATTATACTAAGGAG

Downstream 100 bases:

>100_bases
CCCCTCCGGGTGCTTTTGATAGTTTGGCCGCTCGCTAAATTCCAGCTCAATTTGACTGTATTTTAGGATGGTCCCAGAGG
GGGCCGAGCTCATTAACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MELSTSCILERCLEQEEQIHWGTSLFSLDVKEDLHVRHYKWRLLLLITLLTGLLMWTYSFISLFFVEDPTLAQIGFTCSI
LHALSPLVYRWTRSMPVAAYNMVISGMVFQFSFSFFTGGFFSPTLIWFAVLPLIVGLLTKRFHAVVWTFLSVGAYMLMFL
FQNKGLVPESSISELGRTLAQFMIGLGLIGLVGGFTVFFLELAYFYHHKPKDP

Sequences:

>Translated_213_residues
MELSTSCILERCLEQEEQIHWGTSLFSLDVKEDLHVRHYKWRLLLLITLLTGLLMWTYSFISLFFVEDPTLAQIGFTCSI
LHALSPLVYRWTRSMPVAAYNMVISGMVFQFSFSFFTGGFFSPTLIWFAVLPLIVGLLTKRFHAVVWTFLSVGAYMLMFL
FQNKGLVPESSISELGRTLAQFMIGLGLIGLVGGFTVFFLELAYFYHHKPKDP
>Mature_213_residues
MELSTSCILERCLEQEEQIHWGTSLFSLDVKEDLHVRHYKWRLLLLITLLTGLLMWTYSFISLFFVEDPTLAQIGFTCSI
LHALSPLVYRWTRSMPVAAYNMVISGMVFQFSFSFFTGGFFSPTLIWFAVLPLIVGLLTKRFHAVVWTFLSVGAYMLMFL
FQNKGLVPESSISELGRTLAQFMIGLGLIGLVGGFTVFFLELAYFYHHKPKDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24419; Mature: 24419

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSTSCILERCLEQEEQIHWGTSLFSLDVKEDLHVRHYKWRLLLLITLLTGLLMWTYSF
CCCCHHHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLFFVEDPTLAQIGFTCSILHALSPLVYRWTRSMPVAAYNMVISGMVFQFSFSFFTGGF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FSPTLIWFAVLPLIVGLLTKRFHAVVWTFLSVGAYMLMFLFQNKGLVPESSISELGRTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QFMIGLGLIGLVGGFTVFFLELAYFYHHKPKDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MELSTSCILERCLEQEEQIHWGTSLFSLDVKEDLHVRHYKWRLLLLITLLTGLLMWTYSF
CCCCHHHHHHHHHHHHHHHHHCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISLFFVEDPTLAQIGFTCSILHALSPLVYRWTRSMPVAAYNMVISGMVFQFSFSFFTGGF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FSPTLIWFAVLPLIVGLLTKRFHAVVWTFLSVGAYMLMFLFQNKGLVPESSISELGRTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QFMIGLGLIGLVGGFTVFFLELAYFYHHKPKDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA