| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522404
Identifier: 42522404
GI number: 42522404
Start: 777101
End: 777823
Strand: Direct
Name: 42522404
Synonym: Bd0828
Alternate gene names: NA
Gene position: 777101-777823 (Clockwise)
Preceding gene: 42522403
Following gene: 42522405
Centisome position: 20.54
GC content: 49.93
Gene sequence:
>723_bases ATGCTAAAAAATGGTTTCAAGGCCGCTCTCATCATAGTTCTTGCGCTGATGCTGCATAAGGCGGCTTTTGCGGAAGTGGT GAATCTTCCTACAGAGGAACTGGCACAAGAGTCCGTGCTTCCGGTTTTCGATAAACCCGTCAGCGTGAAAAACCGCAACG TGGTGACAGCCGGTCGTTTTGAAGTCGATGGTTTTTACGGCTATGCGATGACAGAACCTATCGCCAACGTTTCCAAACTG GGCCTGGGTATCTATTATAACACCAGCGAAGCCCATGCCTGGGGTCTATTGATTGCCAAAAACTTTGCGGGCCTTTCCAG CTATGCCGATCAGCTGGATCAGCAGTTCAGTCTGGATTTCAGCCGCGCCCCGGCTCCAGAGATGACGATCATGGGTGATT ACAATCTGAAAGCTTTCTACGGAAAAATGAGTCTGACCAAATCCCTGGTGTTCAACACGCTTCTTTACGGATCCGCTTCC GTGGGGGCGGTGAAGTTTGTGCACAAAACTTACCCGGCGGTGGCTGTGGGTATCGGTCAGAAATTCTATTTCACCAAACA ATGGGCCTTGCGCTTTGATTTGCGTCTTTATGCCAATCAGGCTCCGATTCCATTCCTGAACGGAGCGCTGAAACCCGGCG ATCCAAAGCCTGACTACAGTGATTTCCAAGAGCGTCTAACCTACACTACAAACCTGGATGTGGGTTTGTCCTATCTGTTC TAA
Upstream 100 bases:
>100_bases GGCTGATTATGTGACCCGCAGACCTGGTGGTTTGGGGGCTGTTCGTGAAGTTTGTGATTACATCTATAAATACGGTGCAT TTGCATCGGGTAGGTAAGAA
Downstream 100 bases:
>100_bases GAGGAGCTGACAGATGTTAAGCAGAAAACTCACTTCTCTGGTAATTGTGTCCCTGGCGCTGATGGCGCCGGGCCTGGGTT ATGCCCAGTCTGAAGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MLKNGFKAALIIVLALMLHKAAFAEVVNLPTEELAQESVLPVFDKPVSVKNRNVVTAGRFEVDGFYGYAMTEPIANVSKL GLGIYYNTSEAHAWGLLIAKNFAGLSSYADQLDQQFSLDFSRAPAPEMTIMGDYNLKAFYGKMSLTKSLVFNTLLYGSAS VGAVKFVHKTYPAVAVGIGQKFYFTKQWALRFDLRLYANQAPIPFLNGALKPGDPKPDYSDFQERLTYTTNLDVGLSYLF
Sequences:
>Translated_240_residues MLKNGFKAALIIVLALMLHKAAFAEVVNLPTEELAQESVLPVFDKPVSVKNRNVVTAGRFEVDGFYGYAMTEPIANVSKL GLGIYYNTSEAHAWGLLIAKNFAGLSSYADQLDQQFSLDFSRAPAPEMTIMGDYNLKAFYGKMSLTKSLVFNTLLYGSAS VGAVKFVHKTYPAVAVGIGQKFYFTKQWALRFDLRLYANQAPIPFLNGALKPGDPKPDYSDFQERLTYTTNLDVGLSYLF >Mature_240_residues MLKNGFKAALIIVLALMLHKAAFAEVVNLPTEELAQESVLPVFDKPVSVKNRNVVTAGRFEVDGFYGYAMTEPIANVSKL GLGIYYNTSEAHAWGLLIAKNFAGLSSYADQLDQQFSLDFSRAPAPEMTIMGDYNLKAFYGKMSLTKSLVFNTLLYGSAS VGAVKFVHKTYPAVAVGIGQKFYFTKQWALRFDLRLYANQAPIPFLNGALKPGDPKPDYSDFQERLTYTTNLDVGLSYLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26573; Mature: 26573
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNGFKAALIIVLALMLHKAAFAEVVNLPTEELAQESVLPVFDKPVSVKNRNVVTAGRF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECEE EVDGFYGYAMTEPIANVSKLGLGIYYNTSEAHAWGLLIAKNFAGLSSYADQLDQQFSLDF EECCEECHHHHHHHHHHHHHCEEEEEECCCCCCEEEEEEHHHCCHHHHHHHHHHHHCCCC SRAPAPEMTIMGDYNLKAFYGKMSLTKSLVFNTLLYGSASVGAVKFVHKTYPAVAVGIGQ CCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCC KFYFTKQWALRFDLRLYANQAPIPFLNGALKPGDPKPDYSDFQERLTYTTNLDVGLSYLF EEEEEEEEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHCCC >Mature Secondary Structure MLKNGFKAALIIVLALMLHKAAFAEVVNLPTEELAQESVLPVFDKPVSVKNRNVVTAGRF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECEE EVDGFYGYAMTEPIANVSKLGLGIYYNTSEAHAWGLLIAKNFAGLSSYADQLDQQFSLDF EECCEECHHHHHHHHHHHHHCEEEEEECCCCCCEEEEEEHHHCCHHHHHHHHHHHHCCCC SRAPAPEMTIMGDYNLKAFYGKMSLTKSLVFNTLLYGSASVGAVKFVHKTYPAVAVGIGQ CCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCC KFYFTKQWALRFDLRLYANQAPIPFLNGALKPGDPKPDYSDFQERLTYTTNLDVGLSYLF EEEEEEEEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHHHEEEECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA