| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522405
Identifier: 42522405
GI number: 42522405
Start: 777837
End: 778637
Strand: Direct
Name: 42522405
Synonym: Bd0829
Alternate gene names: NA
Gene position: 777837-778637 (Clockwise)
Preceding gene: 42522404
Following gene: 42522406
Centisome position: 20.56
GC content: 52.18
Gene sequence:
>801_bases ATGTTAAGCAGAAAACTCACTTCTCTGGTAATTGTGTCCCTGGCGCTGATGGCGCCGGGCCTGGGTTATGCCCAGTCTGA AGGTGACGAACTGGATGTGATCGAACTGGAGCTTGAAAAAGAGGCGCCTAGACAGCAGCCGTCCATTTCTGATTCCACGC CGTCCTATCAGGAGACCGCTCCCAAGGACAACACTCTGACGGACTTCTCGGGACTGGGCACCTTGGCTCCATTCCAGGAA ATTTCCATCATTCAAAAACGCTTCCTGCCCAAAACCGGCCGCTTCCAGTTGTTCGGTGGTTTGACGACAGTGACGAATGA TCCGTTCTTCCTGACATTCGGGGGGGTGGCGAAAGCCAGCTACTTTATGTCTGAAAGCTGGGGTCTGGAGCTGAACTATT TCGGTCTGACCACCTCCAGTCGCCAGGCAACGGATGAACTGAAGGAAATTCAGGGTGTCAGCACCGAGAACCTGGTTTAT CCAAAGTCCTTTATCGGTGTGGATCTGATGTACATCCCGGTTTACGGTAAAATGACCTGGTTCAATGAAACGATCGTTCC ATTTGACCTGTATCTGTCTGCTGGTTACGGCAACACCGAAACCCAGTCCGGTGAAAGCGCAGGAACTGTGCACTTGGCAG CAGGGCAGATCTTCGCCCTGAGCAAAGCCTATGCGGTTCGCTGGGATTTCAGCTGGAACTTCTTCAATGCCAAAGGCATC GACGGCTCGACAAATTCTTTCAACAACCTCTTCCTTACCGTGGGTATGAGTTGGTTCTTCCCGGAGGCTAGTTACCGATG A
Upstream 100 bases:
>100_bases GGCGATCCAAAGCCTGACTACAGTGATTTCCAAGAGCGTCTAACCTACACTACAAACCTGGATGTGGGTTTGTCCTATCT GTTCTAAGAGGAGCTGACAG
Downstream 100 bases:
>100_bases AGAAATTATTACCTCTCCTGATTGCCGCAAGTATTGCAGTTCCGGTGGTGGGCGATGCCCAACAGCGAAAAACGCTGAAA AAGCAGCCAGCTCCGGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLSRKLTSLVIVSLALMAPGLGYAQSEGDELDVIELELEKEAPRQQPSISDSTPSYQETAPKDNTLTDFSGLGTLAPFQE ISIIQKRFLPKTGRFQLFGGLTTVTNDPFFLTFGGVAKASYFMSESWGLELNYFGLTTSSRQATDELKEIQGVSTENLVY PKSFIGVDLMYIPVYGKMTWFNETIVPFDLYLSAGYGNTETQSGESAGTVHLAAGQIFALSKAYAVRWDFSWNFFNAKGI DGSTNSFNNLFLTVGMSWFFPEASYR
Sequences:
>Translated_266_residues MLSRKLTSLVIVSLALMAPGLGYAQSEGDELDVIELELEKEAPRQQPSISDSTPSYQETAPKDNTLTDFSGLGTLAPFQE ISIIQKRFLPKTGRFQLFGGLTTVTNDPFFLTFGGVAKASYFMSESWGLELNYFGLTTSSRQATDELKEIQGVSTENLVY PKSFIGVDLMYIPVYGKMTWFNETIVPFDLYLSAGYGNTETQSGESAGTVHLAAGQIFALSKAYAVRWDFSWNFFNAKGI DGSTNSFNNLFLTVGMSWFFPEASYR >Mature_266_residues MLSRKLTSLVIVSLALMAPGLGYAQSEGDELDVIELELEKEAPRQQPSISDSTPSYQETAPKDNTLTDFSGLGTLAPFQE ISIIQKRFLPKTGRFQLFGGLTTVTNDPFFLTFGGVAKASYFMSESWGLELNYFGLTTSSRQATDELKEIQGVSTENLVY PKSFIGVDLMYIPVYGKMTWFNETIVPFDLYLSAGYGNTETQSGESAGTVHLAAGQIFALSKAYAVRWDFSWNFFNAKGI DGSTNSFNNLFLTVGMSWFFPEASYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29448; Mature: 29448
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRKLTSLVIVSLALMAPGLGYAQSEGDELDVIELELEKEAPRQQPSISDSTPSYQETA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHCC PKDNTLTDFSGLGTLAPFQEISIIQKRFLPKTGRFQLFGGLTTVTNDPFFLTFGGVAKAS CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECEEEECCCCEEEEECCHHHHH YFMSESWGLELNYFGLTTSSRQATDELKEIQGVSTENLVYPKSFIGVDLMYIPVYGKMTW HHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEECCCHHHCEEEEEEEEECEEEE FNETIVPFDLYLSAGYGNTETQSGESAGTVHLAAGQIFALSKAYAVRWDFSWNFFNAKGI CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEECEEEEEEEEEECEEECCCC DGSTNSFNNLFLTVGMSWFFPEASYR CCCCCCCCEEEEEECCEEECCCCCCC >Mature Secondary Structure MLSRKLTSLVIVSLALMAPGLGYAQSEGDELDVIELELEKEAPRQQPSISDSTPSYQETA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHCC PKDNTLTDFSGLGTLAPFQEISIIQKRFLPKTGRFQLFGGLTTVTNDPFFLTFGGVAKAS CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECEEEECCCCEEEEECCHHHHH YFMSESWGLELNYFGLTTSSRQATDELKEIQGVSTENLVYPKSFIGVDLMYIPVYGKMTW HHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEECCCHHHCEEEEEEEEECEEEE FNETIVPFDLYLSAGYGNTETQSGESAGTVHLAAGQIFALSKAYAVRWDFSWNFFNAKGI CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEECEEEEEEEEEECEEECCCC DGSTNSFNNLFLTVGMSWFFPEASYR CCCCCCCCEEEEEECCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA