| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522371
Identifier: 42522371
GI number: 42522371
Start: 744726
End: 745751
Strand: Direct
Name: 42522371
Synonym: Bd0794
Alternate gene names: NA
Gene position: 744726-745751 (Clockwise)
Preceding gene: 42522370
Following gene: 42522372
Centisome position: 19.69
GC content: 52.34
Gene sequence:
>1026_bases GTGCACTTTAGTTGTAAGATTTCAAACGCAGTTTTAACCGTTCTGGAGCAGCAAGGCGAAGACCTCAGCCCGCTGTATGA GCAGATCCATCTTCCGATGGAATTGCTCAAAGACTCGTCTTATTGGATGACTGCGCCTGAAATGGAAAACTTCCTGGAAA CCGTACTGCGCCTTCCGCTGAAGCGAGAAGAAAACATTCTGCAGCGTGCGGGACATGAAGGGCCGGAGTTGCGTGCGTGG GGAGTGCTGGACAGCGTTCTGCGCATGATGCCGCACCCTCAGGAAATCTTCAACCAACCAGAGCAGTTCCTTTCTTACTT TATCTCTCCAAAACCACCGATTGAAAATCTTCGCCGTGATGAAGCCAGCATCTCGTTTGATCTGCCTTTGCCGGCAGAGC AATACCCGCTGGTGACGACTTACCTGAAGGCGGCGTTCGAGTCCCTGCCGGTTTACGTTGGTCAGCCGGCGGCGGTCTGT AACTGGGAAGGCATCACCATTCAGCTGAACTGGTCGACTCAGCAAAGTTCGATCTTCAGCGAATCGGTCGGCCATCAGGT CAGCCCGGCTTTGTTCCAAAGTCTGATCGATGATCTTCAGCGCACCCAGCGTGAACGTGAAGATCTGCAAAAATATGTCG GTGACCTTGAAGAAAGAATCCGTACAATTGAAAAACAGAATCTGAAGTCCGCCACCGGCGTTCAGGCGGAAGTGCCAGAG AATGCAGCGTCTTCGCTGCTGCCTCATGAAGGCTCTTTGTCCCACCTGAATTTCGACAGCGAAACTCCGGGCTATGTTTT GAGTCAGAATCTGGCGCGCCTGCACGACTACATGGTGCGCGCCCAGCAGCTGATCACCATGCTTGCAGCCCAGGGGAAAA TGACCCCGGCGGTGAAAGAAGCCATGAGACGCGTTGACTGGGAGTTCGTAAAAACCCAGTACCCGCGCACGGTCTTTGAA AGCATGGATCTGGTTAAGAAAACGATGAATAAAAACGCCGACAAAGAAGGAAATCAACATGTCTGA
Upstream 100 bases:
>100_bases ACGCCGCGTTAATCCCATAACGCAGTTGCTCTGCACAGAGTGAAATATCGTTCGTTTTTTTGTGTTTAAAGAGTGGAAAA ACTAGGCTAAGACCTTCTTC
Downstream 100 bases:
>100_bases AATCATCAGTGTCATCTCTCGTGAAATCCTGGACAGCCGTGGAAACCCGACTGTAGAGGTTGAAGTTACAACAGCTGACG GCAATATGGGCCGCGCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MHFSCKISNAVLTVLEQQGEDLSPLYEQIHLPMELLKDSSYWMTAPEMENFLETVLRLPLKREENILQRAGHEGPELRAW GVLDSVLRMMPHPQEIFNQPEQFLSYFISPKPPIENLRRDEASISFDLPLPAEQYPLVTTYLKAAFESLPVYVGQPAAVC NWEGITIQLNWSTQQSSIFSESVGHQVSPALFQSLIDDLQRTQREREDLQKYVGDLEERIRTIEKQNLKSATGVQAEVPE NAASSLLPHEGSLSHLNFDSETPGYVLSQNLARLHDYMVRAQQLITMLAAQGKMTPAVKEAMRRVDWEFVKTQYPRTVFE SMDLVKKTMNKNADKEGNQHV
Sequences:
>Translated_341_residues MHFSCKISNAVLTVLEQQGEDLSPLYEQIHLPMELLKDSSYWMTAPEMENFLETVLRLPLKREENILQRAGHEGPELRAW GVLDSVLRMMPHPQEIFNQPEQFLSYFISPKPPIENLRRDEASISFDLPLPAEQYPLVTTYLKAAFESLPVYVGQPAAVC NWEGITIQLNWSTQQSSIFSESVGHQVSPALFQSLIDDLQRTQREREDLQKYVGDLEERIRTIEKQNLKSATGVQAEVPE NAASSLLPHEGSLSHLNFDSETPGYVLSQNLARLHDYMVRAQQLITMLAAQGKMTPAVKEAMRRVDWEFVKTQYPRTVFE SMDLVKKTMNKNADKEGNQHV >Mature_341_residues MHFSCKISNAVLTVLEQQGEDLSPLYEQIHLPMELLKDSSYWMTAPEMENFLETVLRLPLKREENILQRAGHEGPELRAW GVLDSVLRMMPHPQEIFNQPEQFLSYFISPKPPIENLRRDEASISFDLPLPAEQYPLVTTYLKAAFESLPVYVGQPAAVC NWEGITIQLNWSTQQSSIFSESVGHQVSPALFQSLIDDLQRTQREREDLQKYVGDLEERIRTIEKQNLKSATGVQAEVPE NAASSLLPHEGSLSHLNFDSETPGYVLSQNLARLHDYMVRAQQLITMLAAQGKMTPAVKEAMRRVDWEFVKTQYPRTVFE SMDLVKKTMNKNADKEGNQHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38986; Mature: 38986
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFSCKISNAVLTVLEQQGEDLSPLYEQIHLPMELLKDSSYWMTAPEMENFLETVLRLPL CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCCEEECHHHHHHHHHHHHCCC KREENILQRAGHEGPELRAWGVLDSVLRMMPHPQEIFNQPEQFLSYFISPKPPIENLRRD CHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCHHHHHHC EASISFDLPLPAEQYPLVTTYLKAAFESLPVYVGQPAAVCNWEGITIQLNWSTQQSSIFS CCCEEECCCCCCCCCHHHHHHHHHHHHHCCEECCCCCEEECCCCEEEEEECCCHHHHHHH ESVGHQVSPALFQSLIDDLQRTQREREDLQKYVGDLEERIRTIEKQNLKSATGVQAEVPE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCC NAASSLLPHEGSLSHLNFDSETPGYVLSQNLARLHDYMVRAQQLITMLAAQGKMTPAVKE HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AMRRVDWEFVKTQYPRTVFESMDLVKKTMNKNADKEGNQHV HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHFSCKISNAVLTVLEQQGEDLSPLYEQIHLPMELLKDSSYWMTAPEMENFLETVLRLPL CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHCCCCCEEECHHHHHHHHHHHHCCC KREENILQRAGHEGPELRAWGVLDSVLRMMPHPQEIFNQPEQFLSYFISPKPPIENLRRD CHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCHHHHHHC EASISFDLPLPAEQYPLVTTYLKAAFESLPVYVGQPAAVCNWEGITIQLNWSTQQSSIFS CCCEEECCCCCCCCCHHHHHHHHHHHHHCCEECCCCCEEECCCCEEEEEECCCHHHHHHH ESVGHQVSPALFQSLIDDLQRTQREREDLQKYVGDLEERIRTIEKQNLKSATGVQAEVPE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCC NAASSLLPHEGSLSHLNFDSETPGYVLSQNLARLHDYMVRAQQLITMLAAQGKMTPAVKE HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AMRRVDWEFVKTQYPRTVFESMDLVKKTMNKNADKEGNQHV HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA