| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is 42522329
Identifier: 42522329
GI number: 42522329
Start: 707614
End: 708099
Strand: Direct
Name: 42522329
Synonym: Bd0746
Alternate gene names: NA
Gene position: 707614-708099 (Clockwise)
Preceding gene: 42522328
Following gene: 42522340
Centisome position: 18.71
GC content: 48.15
Gene sequence:
>486_bases GTGCTGCTGAAGACTCTGTTCCCAATATTCCTAATATGTCTAAATTCGGCTTTCTCCGTGGCTGTAGCTGCGGAGAAACG CAATCAGCTGGAAGAGCTTCTGATCTGGAAGATGAGTGATGAGCTGAAGCTGAACACTTCTGACGAAAAGAAATTCACTG AAATTGTCCGTGACATCAATAAACGCAAAGCCCAGTTCAGCCAGGAGCTGCAGGCCTCCGTCGACAAAATGAACAAGGCG ACCACGGCAAAATCCAAAGATGAAGAGCTGACCCGCTATCGCAAGTCTTTGCAAAGTTATGGTCGAATGAATGAAGAGGA GTTCGACAAGCTCAAGCCCCTGTTGGGACCTGAGCGTATGGTGCAGTATCTGCAAATTAAGCAGGATCTGACCAACCGGA TTAAAACGATGCTGGCGAATCCAGAGGCCACTCCCGGGAAAGCCGCCAAGCCTTTACCTTCTCCAAAGCTGATCGAAGAA AAATAA
Upstream 100 bases:
>100_bases GGACGTAGCTCGCGAATCATTCGAAAATTTATCTGTAGATAAATTCAATAAAATCATGGGTGAAAGCGGACGCTAATCAC CCTGACTCGGGTGAGACAAC
Downstream 100 bases:
>100_bases CCAGCGAAATAACAAAAAAGCCGTCATTAAGACGGCTTTTTCGTTTAGAAGATTTCCCAACCGGAAATGACATCAATCCC AGAATCACAGGGTTGAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLLKTLFPIFLICLNSAFSVAVAAEKRNQLEELLIWKMSDELKLNTSDEKKFTEIVRDINKRKAQFSQELQASVDKMNKA TTAKSKDEELTRYRKSLQSYGRMNEEEFDKLKPLLGPERMVQYLQIKQDLTNRIKTMLANPEATPGKAAKPLPSPKLIEE K
Sequences:
>Translated_161_residues MLLKTLFPIFLICLNSAFSVAVAAEKRNQLEELLIWKMSDELKLNTSDEKKFTEIVRDINKRKAQFSQELQASVDKMNKA TTAKSKDEELTRYRKSLQSYGRMNEEEFDKLKPLLGPERMVQYLQIKQDLTNRIKTMLANPEATPGKAAKPLPSPKLIEE K >Mature_161_residues MLLKTLFPIFLICLNSAFSVAVAAEKRNQLEELLIWKMSDELKLNTSDEKKFTEIVRDINKRKAQFSQELQASVDKMNKA TTAKSKDEELTRYRKSLQSYGRMNEEEFDKLKPLLGPERMVQYLQIKQDLTNRIKTMLANPEATPGKAAKPLPSPKLIEE K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18577; Mature: 18577
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKTLFPIFLICLNSAFSVAVAAEKRNQLEELLIWKMSDELKLNTSDEKKFTEIVRDIN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH KRKAQFSQELQASVDKMNKATTAKSKDEELTRYRKSLQSYGRMNEEEFDKLKPLLGPERM HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH VQYLQIKQDLTNRIKTMLANPEATPGKAAKPLPSPKLIEEK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLKTLFPIFLICLNSAFSVAVAAEKRNQLEELLIWKMSDELKLNTSDEKKFTEIVRDIN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH KRKAQFSQELQASVDKMNKATTAKSKDEELTRYRKSLQSYGRMNEEEFDKLKPLLGPERM HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHH VQYLQIKQDLTNRIKTMLANPEATPGKAAKPLPSPKLIEEK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA