Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522323

Identifier: 42522323

GI number: 42522323

Start: 701124

End: 702470

Strand: Direct

Name: 42522323

Synonym: Bd0739

Alternate gene names: NA

Gene position: 701124-702470 (Clockwise)

Preceding gene: 42522322

Following gene: 42522324

Centisome position: 18.53

GC content: 51.74

Gene sequence:

>1347_bases
ATGAGCAAAAAGAAAAAGAAATCTTCAGCCGCAGAGAATCTGATTGAGTCATTGATGGATGATCTCAAGGAGATTCAATC
CGAGTCCTCGTATCGTGCGAACGATACGGGCGAGGAATATAATGGGCTGCCTGCTCTTGCCACAGACGAAAATCGCCTGG
ATGCGACGGCCGTGGGCGGGAACATCTGGGACAGTCTGGAACAGGGACTTGGGAAAGATGCTGCCAAAGACATCGACTCT
TCAGAGTTTGTCGGTGGTGCTGACTATTCCGCCGAGTCCAATGAAAGCTCTTACGACGGTTCTTACAACACACCGGAGAT
TCCTGAAGTGGAGTCATCCGATTCCGACGATTTTGAAATGCCCGAGGGCTTCGGCGACCTGCCACCTTCCGAGCGTTTCA
TGATGGGCCCTTCCGTGGGTGAAGAGCAGCGTTACGACGGTCCTTCCGCGGATGCTGGCTATCAATCAGCGGATGACCTG
GATGCGATGCCAGTGTCGGCGATGGATGATGATTCCACTCGTCCGGTGTTCAGCTCGCAACCTGCCGGTGAAGACAAAAC
TGTTTCCATTCAACAGGACTTCAACGCCACCAGCTCTGCTGTGGGTGGCACTGATGCGGATAAAACCGTTGCAGTCGAAG
GTTTTGCCAATGCCCGTGTGGGTTCGCGCAAAGCCCAGCCCGAAGTGGATGTTAAAGTCAGTGTCGGAAACTTCCGTGGC
AGCCGTGGGGCCGCCAATGTGATGACGTCCGTGGATGCCAGCCTGGCTCAGGCCGAAAACCTGAAGCTGGCGCAACAGCG
CATCCTGGAACTTGAGCGCGAAGTGGAACATCTGCGTGGTGAAAATGAAGAGCTGGCTTCTGCCGGTGAAATCATCCGTT
CCCGCACTGATGACCTGACCGTCCGTATTTCTGAAATTGAAAAAGAGAAAACCGAAATGCAGGAATCCGCGCAAAGCGAG
ATCCTGATCCTGAAAGGGAACCTTCAGTACAAAGAGAACGAGGTTGCCAAGGCGCGCATCAAGGTTGAAGAACTTGAAAC
TAGACTTAAATCGGACTTCAAAAAGATTCGCGTCCGCGAACGGGAATTGGAAAACCGCCTGGAATTGCTCCGTGCGGAAA
AGTCCGCCCTTGTTCGGTCCAAAGATGAGTATATTTTAGAACAAAAAAGAAAGATTGATCAGCTCTCTCAGGAACTCGAT
AATTACCGTAAGAAATGTCTTGAGCTTAACAAGACGATCGAGGCCAATCAGGATCAAGTCAAACGAACCGAGCGCGCACT
GCGTTTGGCTTTGACGAACCTGGAGGCGAAAGAAGAGAATCTCGTTCCGTTGAAGAAAGCTGAGTAG

Upstream 100 bases:

>100_bases
GATCTCAAAATGAAACACCCCGGACCTAGATCCTGATATTGATCCGGCTTTGTTTTATATTTAAAGGGAAGTCCGGAAAA
TTCCGATATTTCCCTTAGAC

Downstream 100 bases:

>100_bases
TATGGAGTCCGCTTCCCAGGTAGAAAGTAGCGAGGGCACCGCCGTCGCGAAACCTGCTCCCGTAAAAAAGATCAAGATCA
TCGTCAGTGATCTCCATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGGNIWDSLEQGLGKDAAKDIDS
SEFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEMPEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDL
DAMPVSAMDDDSTRPVFSSQPAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRG
SRGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLTVRISEIEKEKTEMQESAQSE
ILILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRERELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELD
NYRKKCLELNKTIEANQDQVKRTERALRLALTNLEAKEENLVPLKKAE

Sequences:

>Translated_448_residues
MSKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGGNIWDSLEQGLGKDAAKDIDS
SEFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEMPEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDL
DAMPVSAMDDDSTRPVFSSQPAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRG
SRGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLTVRISEIEKEKTEMQESAQSE
ILILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRERELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELD
NYRKKCLELNKTIEANQDQVKRTERALRLALTNLEAKEENLVPLKKAE
>Mature_447_residues
SKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGGNIWDSLEQGLGKDAAKDIDSS
EFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEMPEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDLD
AMPVSAMDDDSTRPVFSSQPAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRGS
RGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLTVRISEIEKEKTEMQESAQSEI
LILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRERELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELDN
YRKKCLELNKTIEANQDQVKRTERALRLALTNLEAKEENLVPLKKAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49641; Mature: 49510

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCC
NIWDSLEQGLGKDAAKDIDSSEFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEM
HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDLDAMPVSAMDDDSTRPVFSSQ
CCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRG
CCCCCCEEEECCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
SRGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCE
VRISEIEKEKTEMQESAQSEILILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRE
EEHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELDNYRKKCLELNKTIEANQDQV
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KRTERALRLALTNLEAKEENLVPLKKAE
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKKKKKSSAAENLIESLMDDLKEIQSESSYRANDTGEEYNGLPALATDENRLDATAVGG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCC
NIWDSLEQGLGKDAAKDIDSSEFVGGADYSAESNESSYDGSYNTPEIPEVESSDSDDFEM
HHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PEGFGDLPPSERFMMGPSVGEEQRYDGPSADAGYQSADDLDAMPVSAMDDDSTRPVFSSQ
CCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAGEDKTVSIQQDFNATSSAVGGTDADKTVAVEGFANARVGSRKAQPEVDVKVSVGNFRG
CCCCCCEEEECCCCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
SRGAANVMTSVDASLAQAENLKLAQQRILELEREVEHLRGENEELASAGEIIRSRTDDLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCE
VRISEIEKEKTEMQESAQSEILILKGNLQYKENEVAKARIKVEELETRLKSDFKKIRVRE
EEHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RELENRLELLRAEKSALVRSKDEYILEQKRKIDQLSQELDNYRKKCLELNKTIEANQDQV
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
KRTERALRLALTNLEAKEENLVPLKKAE
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA