The gene/protein map for NC_005363 is currently unavailable.
Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522289

Identifier: 42522289

GI number: 42522289

Start: 654583

End: 656169

Strand: Direct

Name: 42522289

Synonym: Bd0703

Alternate gene names: NA

Gene position: 654583-656169 (Clockwise)

Preceding gene: 42522288

Following gene: 42522290

Centisome position: 17.3

GC content: 52.55

Gene sequence:

>1587_bases
ATGTTTTCCAAAAATTCTCGAGTGAAAATGGTCGCCGGAATGGTGACGGCAGTGACAGGGACAGCACTTTTAATTTCAGC
TTGCAGTGGCGGGGGATCTAGCAGTCCTTCGGAAGACTCTGCATTGGTGATCAGCGGTGGTTTTTCAGGCGTCAGCTTGC
AGTCTATGCAAAAGCCGATGGCAAAAGCCGGTGATCTGACGACCTTTGCGGCTTCGGATTACACCGTGATCTGCGCGATG
ATGGTGGAACCTTTTACTGCGGGGCACAGTGCTCTTTCTGATGATGGAACTTTCTCTTTGTCCATCACGGGCGGTGCGGG
TCAGCCGATTGGCTGTATGATTGTTAAATCAGGCAAGCGTGTTGCTGACTTCGAGTTCACTGCGGAAGAAGCCGGGATGA
CGGGTGCGACCGGTGGTTCCGGCCTTGCCGTCAATCAAGGTGCGACGACCATTCAACTTCCGACGGATTTGTCCATCTCA
GATGCCAAGGTGTCTGTGCCGGTGGCAAATATCACGCAGAACTCTTCAGTGGCTCCGTCCGTTGTTTGGGCCGATCCTAC
GGGGACCTGGAGCATCACCGGTGCTTGTGAAACATCTTTGAATCAAAACGGTATTCCAGTGACAAGCTGTAACGGGGCCC
AGAGCGCCGAAGACATTCCAACATCGGTTTATCTGAAGCAGTTGCAGGCGACCAAAGCAGGTGCCACTAAAACGGGTCTT
TCTGTTTGGAAAGATGCCGCGGCTCGCACGGCGTGCGGTGATAAAGAGGGCATCACTCTTGATGGCGGCTGGACAGCGAC
AGGCGGCTGGGCTGGTGCAATGACCGGCGGTGTGTCCATGGATATCAGTGACACCACGAAACTTGGCACACTGACGACAA
AGGCCAAGGCCCGAATGCATCCTGATCATACCAACACCATGACTGCAGTTTGCGGTAAAACCACAAAAACGGGCGGCGGT
GCGATCGTTTCCGGTACCACACTTTGCAGCGAAGTTGACTTCTCTGGCGGTGGCTGGGGCATGAGCGAAGACGCCTGCAA
ACTTTATTGTGTGATGGGCGCATTGAGCAACGGCGGCGACAATCCAGACTTCGACTGGGGTGCTGCAACTTGCAAAAAAC
GCTACAGAGTCTTCTGGGAAAACAACAACGAACTGTCTTCGGATAAAGACTACAACAATGGCAACGGCAATCAGGCCGGT
GTTTTCGCTACAGGCACTTGTTCTGACACGTCCTTCGACGGATGCCGTGACACGGGTTCCGGCAAGGTTTTGTTCCAGAT
GGAAAAAGCCCAGGACCAGTTCATGCTGGGTGAATTGTTCATCATCGGCAACGTGGGCACTGTGATGGAAAATCATCACT
TCAATTCCACTTTCCCGAATGCAGACCGCACCGGCACGATCACTTGCGGTGGTACTTACATCGACAAGATGACCATGACC
CAAATCAGTGCGACAACAGCGTCTGTGACAGTTGAGAATAACTTTGTAGCTGATCTTTCAAATCCGGCAGAGTGTGCGAC
TAACGAACACTTCTCCAAAAACTCGGATGAAGAGCGCAGCATGACTTTGAAGCTGGTAAAACAGTAA

Upstream 100 bases:

>100_bases
CAAAGGACTGCCCATCTTTACTGTTCTTTGTCAGTCTTTCAGAGCGATTAATGTGGATTAACTTCCAACAGAAAACTCAA
TACGAAGGAAAGGACAGAGA

Downstream 100 bases:

>100_bases
TCTGCACAATAGAAGGAAACTTCCTAAAAGCCCCCGCAGAAATGTCGGGGGCTTTTTTTATTCCATACATAAGTCTTGAA
GTGCTTCACTTTGAAGCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MFSKNSRVKMVAGMVTAVTGTALLISACSGGGSSSPSEDSALVISGGFSGVSLQSMQKPMAKAGDLTTFAASDYTVICAM
MVEPFTAGHSALSDDGTFSLSITGGAGQPIGCMIVKSGKRVADFEFTAEEAGMTGATGGSGLAVNQGATTIQLPTDLSIS
DAKVSVPVANITQNSSVAPSVVWADPTGTWSITGACETSLNQNGIPVTSCNGAQSAEDIPTSVYLKQLQATKAGATKTGL
SVWKDAAARTACGDKEGITLDGGWTATGGWAGAMTGGVSMDISDTTKLGTLTTKAKARMHPDHTNTMTAVCGKTTKTGGG
AIVSGTTLCSEVDFSGGGWGMSEDACKLYCVMGALSNGGDNPDFDWGAATCKKRYRVFWENNNELSSDKDYNNGNGNQAG
VFATGTCSDTSFDGCRDTGSGKVLFQMEKAQDQFMLGELFIIGNVGTVMENHHFNSTFPNADRTGTITCGGTYIDKMTMT
QISATTASVTVENNFVADLSNPAECATNEHFSKNSDEERSMTLKLVKQ

Sequences:

>Translated_528_residues
MFSKNSRVKMVAGMVTAVTGTALLISACSGGGSSSPSEDSALVISGGFSGVSLQSMQKPMAKAGDLTTFAASDYTVICAM
MVEPFTAGHSALSDDGTFSLSITGGAGQPIGCMIVKSGKRVADFEFTAEEAGMTGATGGSGLAVNQGATTIQLPTDLSIS
DAKVSVPVANITQNSSVAPSVVWADPTGTWSITGACETSLNQNGIPVTSCNGAQSAEDIPTSVYLKQLQATKAGATKTGL
SVWKDAAARTACGDKEGITLDGGWTATGGWAGAMTGGVSMDISDTTKLGTLTTKAKARMHPDHTNTMTAVCGKTTKTGGG
AIVSGTTLCSEVDFSGGGWGMSEDACKLYCVMGALSNGGDNPDFDWGAATCKKRYRVFWENNNELSSDKDYNNGNGNQAG
VFATGTCSDTSFDGCRDTGSGKVLFQMEKAQDQFMLGELFIIGNVGTVMENHHFNSTFPNADRTGTITCGGTYIDKMTMT
QISATTASVTVENNFVADLSNPAECATNEHFSKNSDEERSMTLKLVKQ
>Mature_528_residues
MFSKNSRVKMVAGMVTAVTGTALLISACSGGGSSSPSEDSALVISGGFSGVSLQSMQKPMAKAGDLTTFAASDYTVICAM
MVEPFTAGHSALSDDGTFSLSITGGAGQPIGCMIVKSGKRVADFEFTAEEAGMTGATGGSGLAVNQGATTIQLPTDLSIS
DAKVSVPVANITQNSSVAPSVVWADPTGTWSITGACETSLNQNGIPVTSCNGAQSAEDIPTSVYLKQLQATKAGATKTGL
SVWKDAAARTACGDKEGITLDGGWTATGGWAGAMTGGVSMDISDTTKLGTLTTKAKARMHPDHTNTMTAVCGKTTKTGGG
AIVSGTTLCSEVDFSGGGWGMSEDACKLYCVMGALSNGGDNPDFDWGAATCKKRYRVFWENNNELSSDKDYNNGNGNQAG
VFATGTCSDTSFDGCRDTGSGKVLFQMEKAQDQFMLGELFIIGNVGTVMENHHFNSTFPNADRTGTITCGGTYIDKMTMT
QISATTASVTVENNFVADLSNPAECATNEHFSKNSDEERSMTLKLVKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54517; Mature: 54517

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSKNSRVKMVAGMVTAVTGTALLISACSGGGSSSPSEDSALVISGGFSGVSLQSMQKPM
CCCCCCCEEEEHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
AKAGDLTTFAASDYTVICAMMVEPFTAGHSALSDDGTFSLSITGGAGQPIGCMIVKSGKR
HHCCCEEEEECCCCEEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCE
VADFEFTAEEAGMTGATGGSGLAVNQGATTIQLPTDLSISDAKVSVPVANITQNSSVAPS
EEEEEEEHHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCE
VVWADPTGTWSITGACETSLNQNGIPVTSCNGAQSAEDIPTSVYLKQLQATKAGATKTGL
EEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
SVWKDAAARTACGDKEGITLDGGWTATGGWAGAMTGGVSMDISDTTKLGTLTTKAKARMH
HHHHHHHHHHCCCCCCCEEECCCEEECCCCCHHCCCCEEEECCCCCEECEEEECHHHEEC
PDHTNTMTAVCGKTTKTGGGAIVSGTTLCSEVDFSGGGWGMSEDACKLYCVMGALSNGGD
CCCCCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCEEEEEEEEHHCCCCC
NPDFDWGAATCKKRYRVFWENNNELSSDKDYNNGNGNQAGVFATGTCSDTSFDGCRDTGS
CCCCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
GKVLFQMEKAQDQFMLGELFIIGNVGTVMENHHFNSTFPNADRTGTITCGGTYIDKMTMT
CEEEEEEECCCCCEEEEEEEEEECCHHHHCCCCCCCCCCCCCCCEEEEECCEEECCEEEE
QISATTASVTVENNFVADLSNPAECATNEHFSKNSDEERSMTLKLVKQ
EEEEEEEEEEEECCEEEECCCCHHHCCCCCCCCCCCHHHEEEEEEECC
>Mature Secondary Structure
MFSKNSRVKMVAGMVTAVTGTALLISACSGGGSSSPSEDSALVISGGFSGVSLQSMQKPM
CCCCCCCEEEEHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
AKAGDLTTFAASDYTVICAMMVEPFTAGHSALSDDGTFSLSITGGAGQPIGCMIVKSGKR
HHCCCEEEEECCCCEEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCE
VADFEFTAEEAGMTGATGGSGLAVNQGATTIQLPTDLSISDAKVSVPVANITQNSSVAPS
EEEEEEEHHHCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCE
VVWADPTGTWSITGACETSLNQNGIPVTSCNGAQSAEDIPTSVYLKQLQATKAGATKTGL
EEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHH
SVWKDAAARTACGDKEGITLDGGWTATGGWAGAMTGGVSMDISDTTKLGTLTTKAKARMH
HHHHHHHHHHCCCCCCCEEECCCEEECCCCCHHCCCCEEEECCCCCEECEEEECHHHEEC
PDHTNTMTAVCGKTTKTGGGAIVSGTTLCSEVDFSGGGWGMSEDACKLYCVMGALSNGGD
CCCCCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCEEEEEEEEHHCCCCC
NPDFDWGAATCKKRYRVFWENNNELSSDKDYNNGNGNQAGVFATGTCSDTSFDGCRDTGS
CCCCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
GKVLFQMEKAQDQFMLGELFIIGNVGTVMENHHFNSTFPNADRTGTITCGGTYIDKMTMT
CEEEEEEECCCCCEEEEEEEEEECCHHHHCCCCCCCCCCCCCCCEEEEECCEEECCEEEE
QISATTASVTVENNFVADLSNPAECATNEHFSKNSDEERSMTLKLVKQ
EEEEEEEEEEEECCEEEECCCCHHHCCCCCCCCCCCHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA