| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522287
Identifier: 42522287
GI number: 42522287
Start: 652878
End: 653207
Strand: Direct
Name: 42522287
Synonym: Bd0701
Alternate gene names: NA
Gene position: 652878-653207 (Clockwise)
Preceding gene: 42522275
Following gene: 42522288
Centisome position: 17.26
GC content: 50.0
Gene sequence:
>330_bases GTGCCAGAATGGGTTGGCAAGGGCTTTGCTTTATACATTCTCAGGGAGGTTGCTGGTGTCATAAGGAACCAGCACATAAA GGGGATGGATATGAGAGTTCTTCTGGCACTTCTAGCAACAGGTTTCATGGTGATGGTGACTTACTTGGGTCCGGCGAATG CTTCGACTCTGGCGACTCCAAGCTGCAAGATGACTTCCGAAGGTATCTTCGAGGGCTCTTGGGTGAAGCACCGTATCGTG GTGAACGAAGATGTTGTTTACGGTGCGAATGACATGGATTCCATCCTGTCCCAGCTTGATTCCTTGCGTGATCAGGGCCT TTGCCATTAA
Upstream 100 bases:
>100_bases GCACTTCCAATAACCAATCATGCCCCAAAAGACAACCTCGAAGGGCCGTTTGTGAAAAGTCTTATCGACCGATACCCGAC GGGGCGAGGGTGGGGAGGGA
Downstream 100 bases:
>100_bases AGTGGCAGGGCTTTGAGCCGAAATGACTTTTTAACCCAGATTTGGAAGCCCTATCCCGCAATGCCTGAAAATGCTCAGGC GGCCGGGCGTATTTATCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MPEWVGKGFALYILREVAGVIRNQHIKGMDMRVLLALLATGFMVMVTYLGPANASTLATPSCKMTSEGIFEGSWVKHRIV VNEDVVYGANDMDSILSQLDSLRDQGLCH
Sequences:
>Translated_109_residues MPEWVGKGFALYILREVAGVIRNQHIKGMDMRVLLALLATGFMVMVTYLGPANASTLATPSCKMTSEGIFEGSWVKHRIV VNEDVVYGANDMDSILSQLDSLRDQGLCH >Mature_108_residues PEWVGKGFALYILREVAGVIRNQHIKGMDMRVLLALLATGFMVMVTYLGPANASTLATPSCKMTSEGIFEGSWVKHRIVV NEDVVYGANDMDSILSQLDSLRDQGLCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12001; Mature: 11870
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEWVGKGFALYILREVAGVIRNQHIKGMDMRVLLALLATGFMVMVTYLGPANASTLATP CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SCKMTSEGIFEGSWVKHRIVVNEDVVYGANDMDSILSQLDSLRDQGLCH CCCCCCCCCCCCCCEEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PEWVGKGFALYILREVAGVIRNQHIKGMDMRVLLALLATGFMVMVTYLGPANASTLATP CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SCKMTSEGIFEGSWVKHRIVVNEDVVYGANDMDSILSQLDSLRDQGLCH CCCCCCCCCCCCCCEEEEEEECCCEEECCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA