Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522234

Identifier: 42522234

GI number: 42522234

Start: 599630

End: 600871

Strand: Direct

Name: 42522234

Synonym: Bd0645

Alternate gene names: NA

Gene position: 599630-600871 (Clockwise)

Preceding gene: 42522230

Following gene: 42522239

Centisome position: 15.85

GC content: 51.37

Gene sequence:

>1242_bases
ATGAAAACACAAAAAAGCACAACCAACATCCTGATGGCTCTTCTAGTAACTACAACTGTTTCCTCCACGACCTTCGCCAT
GGCGAAGAAGCCGGTGAACTCCGGCGGTGGCAGCAACGCAGGCACAACTCCTCCAGCAACGACGCCTCCGACAACAACTC
CACCGAGCACGACTCCGCCAACGACGACCCCGCCGGTTCGTGAACCAGCAGCGGTGACAGATTCCATCACTCCGGAAGGT
TTCAATGTCTTTTCGGAAGTTGCTTATCCGGTGGGTGGTGTGGTGGACACAAGATACAGCAACTACAGAGAGCTGCTGCC
GGTGCGTAATGCCCAGGAGGCTCATGCCACAGATAAATGTGACACGAACCTGGACACTAATGATCGCTTCGCTGATCGTA
TTGCCTACGCGGTTGAGCTGAAGATGCAGCCGAGCAAAGCGCAACTGGGTTATGTGGCTTCTTATTTCAATCTGAATAAA
GACGTAAATACGTATCTGCCAAACAGTTTGATTTCACATCCTCTGTGCAACGTGACGTCTTCCACTTTGAACACGACCTT
TGCGGGTAAAAACATTCCAAGTGCGGCAACGATCAAAAAAATCAATGACTTCACAAACCTGATGAATGGTTATCGTCGAG
AAGCTTTGTCCGGCAACCGCGAAGGTTACGTGAAGGCTTCCAAATTGTGGTCGAAGTTCATGATGTGTTTGTCTTATATG
GAATCTTTGACGACGGCCGACACGGCAAAAGCCCAAAGGGTCGCTGACAAGTACGGTCCTTCCGGTTATCGCCGTCCGGC
AGGTGTGAACTTCTATGAAGATCCAAACCAGCCAGCGGAATCCCGCTTGAACATTGGTCTGTTCCAGTTCACTCCGGACG
CAGGCGGTAACATCCAGGCTTGTATCCGTGAATGGAATCAACTGTATCCTAAGTGCGGTATCAAAACGAATGCCTCCCAG
TCAGAGTTGATCCGTGTGTTGGGAAGTTCTTTGCAGACCTTCAATGCCTTCTGTGCGGCAGCGAAAGTCACGGGCAGCTT
CGCGGTTCAGGTGAATGCGACAAGTTCCAAGAACACACACCCGTACAACGTGAAATCCAACGGCTCTTTGAAAGCACCGG
CAGAGCGTTGCGTGAGCCCGCACATGTCCGTGGGCAGATCCTACAACCACTTCGGTCCGTTCCAGAACACGTCGGGTTTC
ACTCTGGACAATATCATCAGCTGTACAATGGCTGGCGAGTAG

Upstream 100 bases:

>100_bases
ATTTTTCAGTTTTTCCAGACTTTACCAAGATCCTGAAAACTGGACCTAAAAATGGTCCAGAACGCCTTTAGTCGCGCGAC
CTATCTCCGATCTAGGAGGT

Downstream 100 bases:

>100_bases
TCACTGGAAATTAGATATTGGAAATTGGAATTGTGAAAACGAAAAAGCCCGCTGTTTTAAGCGGGCTTTTTTGTTTTATT
CGGCGGTGGGTTTTTGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MKTQKSTTNILMALLVTTTVSSTTFAMAKKPVNSGGGSNAGTTPPATTPPTTTPPSTTPPTTTPPVREPAAVTDSITPEG
FNVFSEVAYPVGGVVDTRYSNYRELLPVRNAQEAHATDKCDTNLDTNDRFADRIAYAVELKMQPSKAQLGYVASYFNLNK
DVNTYLPNSLISHPLCNVTSSTLNTTFAGKNIPSAATIKKINDFTNLMNGYRREALSGNREGYVKASKLWSKFMMCLSYM
ESLTTADTAKAQRVADKYGPSGYRRPAGVNFYEDPNQPAESRLNIGLFQFTPDAGGNIQACIREWNQLYPKCGIKTNASQ
SELIRVLGSSLQTFNAFCAAAKVTGSFAVQVNATSSKNTHPYNVKSNGSLKAPAERCVSPHMSVGRSYNHFGPFQNTSGF
TLDNIISCTMAGE

Sequences:

>Translated_413_residues
MKTQKSTTNILMALLVTTTVSSTTFAMAKKPVNSGGGSNAGTTPPATTPPTTTPPSTTPPTTTPPVREPAAVTDSITPEG
FNVFSEVAYPVGGVVDTRYSNYRELLPVRNAQEAHATDKCDTNLDTNDRFADRIAYAVELKMQPSKAQLGYVASYFNLNK
DVNTYLPNSLISHPLCNVTSSTLNTTFAGKNIPSAATIKKINDFTNLMNGYRREALSGNREGYVKASKLWSKFMMCLSYM
ESLTTADTAKAQRVADKYGPSGYRRPAGVNFYEDPNQPAESRLNIGLFQFTPDAGGNIQACIREWNQLYPKCGIKTNASQ
SELIRVLGSSLQTFNAFCAAAKVTGSFAVQVNATSSKNTHPYNVKSNGSLKAPAERCVSPHMSVGRSYNHFGPFQNTSGF
TLDNIISCTMAGE
>Mature_413_residues
MKTQKSTTNILMALLVTTTVSSTTFAMAKKPVNSGGGSNAGTTPPATTPPTTTPPSTTPPTTTPPVREPAAVTDSITPEG
FNVFSEVAYPVGGVVDTRYSNYRELLPVRNAQEAHATDKCDTNLDTNDRFADRIAYAVELKMQPSKAQLGYVASYFNLNK
DVNTYLPNSLISHPLCNVTSSTLNTTFAGKNIPSAATIKKINDFTNLMNGYRREALSGNREGYVKASKLWSKFMMCLSYM
ESLTTADTAKAQRVADKYGPSGYRRPAGVNFYEDPNQPAESRLNIGLFQFTPDAGGNIQACIREWNQLYPKCGIKTNASQ
SELIRVLGSSLQTFNAFCAAAKVTGSFAVQVNATSSKNTHPYNVKSNGSLKAPAERCVSPHMSVGRSYNHFGPFQNTSGF
TLDNIISCTMAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44629; Mature: 44629

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQKSTTNILMALLVTTTVSSTTFAMAKKPVNSGGGSNAGTTPPATTPPTTTPPSTTPP
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTTPPVREPAAVTDSITPEGFNVFSEVAYPVGGVVDTRYSNYRELLPVRNAQEAHATDKC
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCHHHHCCCCC
DTNLDTNDRFADRIAYAVELKMQPSKAQLGYVASYFNLNKDVNTYLPNSLISHPLCNVTS
CCCCCCCHHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCHHHHHCCHHHCHH
STLNTTFAGKNIPSAATIKKINDFTNLMNGYRREALSGNREGYVKASKLWSKFMMCLSYM
HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
ESLTTADTAKAQRVADKYGPSGYRRPAGVNFYEDPNQPAESRLNIGLFQFTPDAGGNIQA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCCHHH
CIREWNQLYPKCGIKTNASQSELIRVLGSSLQTFNAFCAAAKVTGSFAVQVNATSSKNTH
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
PYNVKSNGSLKAPAERCVSPHMSVGRSYNHFGPFQNTSGFTLDNIISCTMAGE
CCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHEEEEECCC
>Mature Secondary Structure
MKTQKSTTNILMALLVTTTVSSTTFAMAKKPVNSGGGSNAGTTPPATTPPTTTPPSTTPP
CCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TTTPPVREPAAVTDSITPEGFNVFSEVAYPVGGVVDTRYSNYRELLPVRNAQEAHATDKC
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCHHHHCCCCC
DTNLDTNDRFADRIAYAVELKMQPSKAQLGYVASYFNLNKDVNTYLPNSLISHPLCNVTS
CCCCCCCHHHHHHHEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCHHHHHCCHHHCHH
STLNTTFAGKNIPSAATIKKINDFTNLMNGYRREALSGNREGYVKASKLWSKFMMCLSYM
HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
ESLTTADTAKAQRVADKYGPSGYRRPAGVNFYEDPNQPAESRLNIGLFQFTPDAGGNIQA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEEECCCCCCCHHH
CIREWNQLYPKCGIKTNASQSELIRVLGSSLQTFNAFCAAAKVTGSFAVQVNATSSKNTH
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
PYNVKSNGSLKAPAERCVSPHMSVGRSYNHFGPFQNTSGFTLDNIISCTMAGE
CCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA