Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522230

Identifier: 42522230

GI number: 42522230

Start: 596256

End: 597536

Strand: Direct

Name: 42522230

Synonym: Bd0641

Alternate gene names: NA

Gene position: 596256-597536 (Clockwise)

Preceding gene: 42522229

Following gene: 42522234

Centisome position: 15.76

GC content: 49.1

Gene sequence:

>1281_bases
ATGCCACTGCCCCAGCATCAGCTGGTGCATGTGCTTTTCCATCGCCACCAGCGGGGACAGCAGGTTTTTCGTCATGCGGA
TCACCAGGAACAATGTGACCCCGGTCAGGAGTACAAAGCTTGCCGCCAGGAAGATCTGCAGCCAAGTGATCTCGCGCTCC
AGATGCTGAACCAGCGTGGGGTGCGTGTCGTAAGCAAGACTTTTGAACAGTTCGTAGTTCTGATTGATGAAGTAATAAGC
CGGAAGCAGGAACAAAATAGCGCCCCCCGCAACGGCCGTGATCATGTACCAGCAATACTTGTACTGGAAGGCTTTGTTCA
ATATGAAGCGGCGGGGACCCTGTCCCTGAGGCACGCGTTGAGGTTCGATCACTCTTCTTCCATACAACATATGTCCCACT
TATCGGCGGGTTGTGTTTTGTGTAGAGTCCAATTATTCTCAAAAAGAAGCAAATTCACGGAGGACAGCATGAGTTTATCA
CCGGCTTTCGCAACTGCGGGGTCCAAGCCGCAAGATACATTGAGACTAAGGTCTCATGAAAATCAGAGACTAAGGTCTTT
GATTTACGTTCTTTTTCTTACCTTGGTCGTCCTGCTGTCAGCGATTGAGTCCCGCGCTCAGAACGAAGGTCCTGAATCGA
CCACTCTGGTCGATGAAAGTTACTCTTTGAAAGCCGACCGCGAGGCTTTTGAAGAGCTTCGTAAAAACATCCCGGTCAAT
GTAAAAAAAGACAACGATGAAAAGGCCTTCATGGATGGTCTGGTTTCGGATTTGTCCCGCACACCTTCCGAGGTGCGCGG
CAAGTTCAGCTCTATCGTGAACAAGAAGCGTGATCTGTTTAATAAGGACATGACCAAGGCGCGCGAACAGTTCGGCAAGA
TTCAGAAAAAAGAGCGTGATGAATTCACCAAGGACTTGGCGGAAAAACGCAAGGCCTTCGCCAAAACCAAGTCGACATCC
GATGAGCGCAAAGAGTTCTATGACGAACACGAATCCAAGCGCAAAGACTTTTACGAAAGCCAGAAAGAAAAGCGCGACCA
GTTTGAAGCCGACATGCGCGACAAACGCAAGAATTTCGACGACTACATCCGCTCAAAGACCGACGAATTCAATCAGCTTC
ACCGCGATTACACCAAGCGCTTTGAAGAAAATAAAAAAGCCCTGGCTGATCAGAAAAAACAAGCCGAGTTAAAAAAGAAA
CAACAGCAGCAGGATCTGGAAAAAGAATACGAAGCGATCCGCAAACAGGATCCGACGATTCTCGGACCCACCGGCGAATA
A

Upstream 100 bases:

>100_bases
GTTCGGTCTCGGTGTTGGCTTTCAAAGCACGATAGAAATAGTCATAAGTCATGGACAGGTCGCGGAAGTCGTCTTCTTCC
GGCAGGTGATAATCCGGAAT

Downstream 100 bases:

>100_bases
CGCGCTGTAGGTGTAAAAAGTCACCAGGCACCTTTTAGCGGCGGAAGACTTCTTTGTGGATTTCTAGGGTGATGGCGAAG
AGTTTGTTTTCCAGGATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MPLPQHQLVHVLFHRHQRGQQVFRHADHQEQCDPGQEYKACRQEDLQPSDLALQMLNQRGVRVVSKTFEQFVVLIDEVIS
RKQEQNSAPRNGRDHVPAILVLEGFVQYEAAGTLSLRHALRFDHSSSIQHMSHLSAGCVLCRVQLFSKRSKFTEDSMSLS
PAFATAGSKPQDTLRLRSHENQRLRSLIYVLFLTLVVLLSAIESRAQNEGPESTTLVDESYSLKADREAFEELRKNIPVN
VKKDNDEKAFMDGLVSDLSRTPSEVRGKFSSIVNKKRDLFNKDMTKAREQFGKIQKKERDEFTKDLAEKRKAFAKTKSTS
DERKEFYDEHESKRKDFYESQKEKRDQFEADMRDKRKNFDDYIRSKTDEFNQLHRDYTKRFEENKKALADQKKQAELKKK
QQQQDLEKEYEAIRKQDPTILGPTGE

Sequences:

>Translated_426_residues
MPLPQHQLVHVLFHRHQRGQQVFRHADHQEQCDPGQEYKACRQEDLQPSDLALQMLNQRGVRVVSKTFEQFVVLIDEVIS
RKQEQNSAPRNGRDHVPAILVLEGFVQYEAAGTLSLRHALRFDHSSSIQHMSHLSAGCVLCRVQLFSKRSKFTEDSMSLS
PAFATAGSKPQDTLRLRSHENQRLRSLIYVLFLTLVVLLSAIESRAQNEGPESTTLVDESYSLKADREAFEELRKNIPVN
VKKDNDEKAFMDGLVSDLSRTPSEVRGKFSSIVNKKRDLFNKDMTKAREQFGKIQKKERDEFTKDLAEKRKAFAKTKSTS
DERKEFYDEHESKRKDFYESQKEKRDQFEADMRDKRKNFDDYIRSKTDEFNQLHRDYTKRFEENKKALADQKKQAELKKK
QQQQDLEKEYEAIRKQDPTILGPTGE
>Mature_425_residues
PLPQHQLVHVLFHRHQRGQQVFRHADHQEQCDPGQEYKACRQEDLQPSDLALQMLNQRGVRVVSKTFEQFVVLIDEVISR
KQEQNSAPRNGRDHVPAILVLEGFVQYEAAGTLSLRHALRFDHSSSIQHMSHLSAGCVLCRVQLFSKRSKFTEDSMSLSP
AFATAGSKPQDTLRLRSHENQRLRSLIYVLFLTLVVLLSAIESRAQNEGPESTTLVDESYSLKADREAFEELRKNIPVNV
KKDNDEKAFMDGLVSDLSRTPSEVRGKFSSIVNKKRDLFNKDMTKAREQFGKIQKKERDEFTKDLAEKRKAFAKTKSTSD
ERKEFYDEHESKRKDFYESQKEKRDQFEADMRDKRKNFDDYIRSKTDEFNQLHRDYTKRFEENKKALADQKKQAELKKKQ
QQQDLEKEYEAIRKQDPTILGPTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49714; Mature: 49582

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
PLPQHQLVHVLFHRHQRGQQVFRHADHQEQCDPGQEYKACRQEDLQPSDLALQMLNQRG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHH
VRVVSKTFEQFVVLIDEVISRKQEQNSAPRNGRDHVPAILVLEGFVQYEAAGTLSLRHAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RFDHSSSIQHMSHLSAGCVLCRVQLFSKRSKFTEDSMSLSPAFATAGSKPQDTLRLRSHE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCCCHHHHHHHHHH
NQRLRSLIYVLFLTLVVLLSAIESRAQNEGPESTTLVDESYSLKADREAFEELRKNIPVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCE
VKKDNDEKAFMDGLVSDLSRTPSEVRGKFSSIVNKKRDLFNKDMTKAREQFGKIQKKERD
EECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFTKDLAEKRKAFAKTKSTSDERKEFYDEHESKRKDFYESQKEKRDQFEADMRDKRKNFD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
DYIRSKTDEFNQLHRDYTKRFEENKKALADQKKQAELKKKQQQQDLEKEYEAIRKQDPTI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LGPTGE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA