| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is 42522229
Identifier: 42522229
GI number: 42522229
Start: 595003
End: 595689
Strand: Direct
Name: 42522229
Synonym: Bd0639
Alternate gene names: NA
Gene position: 595003-595689 (Clockwise)
Preceding gene: 42522228
Following gene: 42522230
Centisome position: 15.73
GC content: 47.6
Gene sequence:
>687_bases ATGAAAAGCCATTGCCTAAAAATTGTGTTCGCCATTTTTACACTTCCTGTATTCGCTAAAGCAGACGTAGTTGCGAATCC TGAGGTGTACAGCGCGATCGAAAGCCTCTCGAAGTACGTTCAGCAAAAGGACGACTCTTTCAATGCTGGTGTTATGTATA GAAAGATTCTGGAAAATACAGAAGAAAAGGGTGTCGTCGAAGGCTTGGCTATTCCAATTGGGAAGTTCTATTTGATGGAG AAAGACCCCGCTGCCCGTCGGAATTTGAAGGCCGTTTTGTCGGGAATTAATATTGAGGTCGAAGAAGACTCCACCGCAGA AGATCAATCAAATAGACATCACCGCAACAATCAAAATCTTGTTATTGATAGAGACAAATGTGTCGCCACCTGTATTGATG ACGTTATCGATGGGGCCCGCGATGGTGCTGCTATTGGAACTGCAATTGGCATCGGAGGAGGGCCTCAAGTTGGGGCTGCA GGAGCGGCGGGTGGGGCCGTGATTGGCGGGGCGCTGGGGGGAGTGAAGTGCTCTAGGAAGCCTGAGTGCAATGACGACAA ATCGAAAGATGTTGTTTCTCCAAATGCCCAAGATCGCGCTCGTGTTTACTTTACGGTGGAGGGCAATATGCAAACGAAGA TGAGAATTGTTGTGAACAATGGTCATCGAATTCCAGGAGGATTCTAG
Upstream 100 bases:
>100_bases AAAAATGGATTTATCGCCCTCATTCCCTGTTTAAATGGATTTGAGGCCTGCTTTTCCTAGCACCGTCTCTGCATTAGTAC CGATGCAAAGGAGACTGTTT
Downstream 100 bases:
>100_bases TATGAATTCCAATGTTCGAGCTTGGTTGCTTCAAAACGTTCAGGTTCCGATTTGGGTTGTACTAGTTGGTGTGCTAATGG GAGTGGTTCTGCCTTCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKSHCLKIVFAIFTLPVFAKADVVANPEVYSAIESLSKYVQQKDDSFNAGVMYRKILENTEEKGVVEGLAIPIGKFYLME KDPAARRNLKAVLSGINIEVEEDSTAEDQSNRHHRNNQNLVIDRDKCVATCIDDVIDGARDGAAIGTAIGIGGGPQVGAA GAAGGAVIGGALGGVKCSRKPECNDDKSKDVVSPNAQDRARVYFTVEGNMQTKMRIVVNNGHRIPGGF
Sequences:
>Translated_228_residues MKSHCLKIVFAIFTLPVFAKADVVANPEVYSAIESLSKYVQQKDDSFNAGVMYRKILENTEEKGVVEGLAIPIGKFYLME KDPAARRNLKAVLSGINIEVEEDSTAEDQSNRHHRNNQNLVIDRDKCVATCIDDVIDGARDGAAIGTAIGIGGGPQVGAA GAAGGAVIGGALGGVKCSRKPECNDDKSKDVVSPNAQDRARVYFTVEGNMQTKMRIVVNNGHRIPGGF >Mature_228_residues MKSHCLKIVFAIFTLPVFAKADVVANPEVYSAIESLSKYVQQKDDSFNAGVMYRKILENTEEKGVVEGLAIPIGKFYLME KDPAARRNLKAVLSGINIEVEEDSTAEDQSNRHHRNNQNLVIDRDKCVATCIDDVIDGARDGAAIGTAIGIGGGPQVGAA GAAGGAVIGGALGGVKCSRKPECNDDKSKDVVSPNAQDRARVYFTVEGNMQTKMRIVVNNGHRIPGGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24377; Mature: 24377
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSHCLKIVFAIFTLPVFAKADVVANPEVYSAIESLSKYVQQKDDSFNAGVMYRKILENT CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC EEKGVVEGLAIPIGKFYLMEKDPAARRNLKAVLSGINIEVEEDSTAEDQSNRHHRNNQNL HHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCE VIDRDKCVATCIDDVIDGARDGAAIGTAIGIGGGPQVGAAGAAGGAVIGGALGGVKCSRK EEECHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCC PECNDDKSKDVVSPNAQDRARVYFTVEGNMQTKMRIVVNNGHRIPGGF CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCEECCCCC >Mature Secondary Structure MKSHCLKIVFAIFTLPVFAKADVVANPEVYSAIESLSKYVQQKDDSFNAGVMYRKILENT CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC EEKGVVEGLAIPIGKFYLMEKDPAARRNLKAVLSGINIEVEEDSTAEDQSNRHHRNNQNL HHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHCCCCCCE VIDRDKCVATCIDDVIDGARDGAAIGTAIGIGGGPQVGAAGAAGGAVIGGALGGVKCSRK EEECHHHHHHHHHHHHCCCCCCCHHHHEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCC PECNDDKSKDVVSPNAQDRARVYFTVEGNMQTKMRIVVNNGHRIPGGF CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA