| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522207
Identifier: 42522207
GI number: 42522207
Start: 574083
End: 574694
Strand: Direct
Name: 42522207
Synonym: Bd0615
Alternate gene names: NA
Gene position: 574083-574694 (Clockwise)
Preceding gene: 42522206
Following gene: 42522208
Centisome position: 15.18
GC content: 50.0
Gene sequence:
>612_bases ATGCCTATGATCACATTCTCTGAAAATCACGAATCATCCTTGGTTGCTTTTGAAGAGGGTCAAGCCCTGGCTTCCCTGCG CGATCCGCGCGGTGAAGGTTTGAAGTGGGCTTATTCTTTGGGGGTTTTACCGGCAGAACATGTTGTGGTTGTGGGCCTTG GTGCCGGCTTCCATGTGGCGGCTTTGGCGGACGTGGATCCAGATGTGCGTATCACGGTGATTGAATCCCGCGAATCCCTG ATTCCGGTGTTCCGTTCCCAGTTCCCGGATCTTGAAGACCGTGTAGAAATTCGTGTGGTGCAAACCGCTCAGGATCTTTT CAAGTCTGAACTTTTCCAGGAAGTGCTGAATCACCGCTCTTTTGTTCTTTCCTTCCAGGAATGTTGGGGGGCGCAGGCTC AGTTCTTTACTGAGTGTTTTGCGCACCTGACCGGTCGTTCAGTGGAATCCGTTCGCTACCATTTCGAAGAATTCGGTATC AATATGAAGGCCCTTTACCTGCAGCCAAATCAGTTGTTGTCCATCAACGATGTGATTCCGGTGATAGAGGCTTCTGCGAT GCCTGAAACTAATAAACAGATTTTCCGCGTGCTCGGTGAATTGGTGAAATAA
Upstream 100 bases:
>100_bases GCGATGCTCGAGATCGAGCGTGTCCTTCTTTGGAATCCAGATCACAAAGAAGTCAGAAATCTGAAAAAGAAAATCATCGC ATCACAGAAGGTTACTTAAA
Downstream 100 bases:
>100_bases ATGAAGATTCTGGTTGTCTCTCTTCTGAGGCTTGGTGACATCATCCAGCAGGAACCTCTGCTGCGCGGACTGCGGGAAAA ACATCCCACTGCCGAGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MPMITFSENHESSLVAFEEGQALASLRDPRGEGLKWAYSLGVLPAEHVVVVGLGAGFHVAALADVDPDVRITVIESRESL IPVFRSQFPDLEDRVEIRVVQTAQDLFKSELFQEVLNHRSFVLSFQECWGAQAQFFTECFAHLTGRSVESVRYHFEEFGI NMKALYLQPNQLLSINDVIPVIEASAMPETNKQIFRVLGELVK
Sequences:
>Translated_203_residues MPMITFSENHESSLVAFEEGQALASLRDPRGEGLKWAYSLGVLPAEHVVVVGLGAGFHVAALADVDPDVRITVIESRESL IPVFRSQFPDLEDRVEIRVVQTAQDLFKSELFQEVLNHRSFVLSFQECWGAQAQFFTECFAHLTGRSVESVRYHFEEFGI NMKALYLQPNQLLSINDVIPVIEASAMPETNKQIFRVLGELVK >Mature_202_residues PMITFSENHESSLVAFEEGQALASLRDPRGEGLKWAYSLGVLPAEHVVVVGLGAGFHVAALADVDPDVRITVIESRESLI PVFRSQFPDLEDRVEIRVVQTAQDLFKSELFQEVLNHRSFVLSFQECWGAQAQFFTECFAHLTGRSVESVRYHFEEFGIN MKALYLQPNQLLSINDVIPVIEASAMPETNKQIFRVLGELVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22838; Mature: 22707
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMITFSENHESSLVAFEEGQALASLRDPRGEGLKWAYSLGVLPAEHVVVVGLGAGFHVA CCEEECCCCCCCCEEEEECCCHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEE ALADVDPDVRITVIESRESLIPVFRSQFPDLEDRVEIRVVQTAQDLFKSELFQEVLNHRS EEECCCCCEEEEEECCCHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHHHCCHH FVLSFQECWGAQAQFFTECFAHLTGRSVESVRYHFEEFGINMKALYLQPNQLLSINDVIP HEEEHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCEEECCCHHH VIEASAMPETNKQIFRVLGELVK HHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure PMITFSENHESSLVAFEEGQALASLRDPRGEGLKWAYSLGVLPAEHVVVVGLGAGFHVA CEEECCCCCCCCEEEEECCCHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEE ALADVDPDVRITVIESRESLIPVFRSQFPDLEDRVEIRVVQTAQDLFKSELFQEVLNHRS EEECCCCCEEEEEECCCHHHHHHHHHHCCCCCHHEEEEEHHHHHHHHHHHHHHHHHCCHH FVLSFQECWGAQAQFFTECFAHLTGRSVESVRYHFEEFGINMKALYLQPNQLLSINDVIP HEEEHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCEEECCCHHH VIEASAMPETNKQIFRVLGELVK HHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA