Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522208

Identifier: 42522208

GI number: 42522208

Start: 574695

End: 576203

Strand: Direct

Name: 42522208

Synonym: Bd0616

Alternate gene names: NA

Gene position: 574695-576203 (Clockwise)

Preceding gene: 42522207

Following gene: 42522209

Centisome position: 15.19

GC content: 49.5

Gene sequence:

>1509_bases
ATGAAGATTCTGGTTGTCTCTCTTCTGAGGCTTGGTGACATCATCCAGCAGGAACCTCTGCTGCGCGGACTGCGGGAAAA
ACATCCCACTGCCGAGATTCATCTGCTGATGAACCGTCAATTTGCAAATGTCGAACGCATCCTTCACGGCGTGGTGGATA
AGTACATCCATTTTGACCGGGAAACTTTGCAACGGGGCTTGGGCGAGAGCGGCTTTAATATTCTGTATTCCTATTCTGTG
CTGGAAGAACTTGTGCAATCGTTGAATGGCGAGAAGTACGATCTGGCTTATAATTTTACGCACAATAGGCTGAGTGCCTA
TTTGCTGGGGGCTTTGGAAATCCCGGAAAAGCGCGGTCTTCATCAAGAAGACGGCCGCTTCCGTGGTATGGACAACCGCT
GGCTTAAGTACTTTAACGACCGTTTTTCAGGAAGCCAAAAGTCTCTGTTCCATTATGTGGAGCTTTTGGGCAATTCCTTC
AACCTTCCGGTTCGCCCTCAGGCGGCCGGGGTTCGCAAGAAAAGCAAATCCATTTTGTTCCAGTGTCTGACCAGTCAGAC
TGCGAAAAACTGGGGCCTGGATAATTTCGTTCAGCTGAAAAGAACCATTGAAATGGCCCTCGTGGATTACAAGGTTCAGA
TTCTTGGGGCACCGTTTGAACGGGAGACTTTGTTAACTGCATTTTCTGAAAAAGATCTTTTGATCTGCGATCTATCTGAA
GCCCGCAAACATCTGCAAGACTGTGCTTTGCTGGTCACCGGCGACACCAGTATCAAACATCTGGCGGCGCAAATGGGCGT
TCCTTTGGTGGAACTGGTTCTGGGCACCAGCGATGCCGTGAAGACCGGTGCATTTTCTGAAAACGCAAGAATCCTGACTG
AAGACATCACCGTCGAGCGCGTGTTTGGTGAAGTCTGGGATGAACTCAGTGGTGAATCCAAAAACATTGAAAACACCGCA
GGCTCTTTGGAGCGAGTGACTTGGAAGCTCTATTTGGATAAAGGCTCCCGAGATGCAGAGCCGGCGTATGTCGCGGCTTT
GCAACAGCTCTTGGATTCTCATCCGGAAAAGAACCTGTTGCAGGCTTTGTCCGGCTATCAGGAAAAGACGCAAGTTTATC
TTTCCTGGCAAAAACGCATCATCGCGGCGCTACCGTCGCGGGAAGTGCTGGCCAGCCGCAAGGCGGTTTCGGCAAACGAT
GTGGCTGAACTGATTTTGGTGGCTCAGGATATAATTAAAAGTAAAAAAGATGACGCGGGTTATTTCCAGGGGTTCGTAGA
GTCCCTGTTGGCCCGGTATTCACAGGCGACCCAGATTCTGGATCGCGTGCAGGCGGACCTGGAAGATCAAGCCGAGCTTC
TGGCAATTCGTGAAACATTGACTCGTCATTTGCAATCTCTCTCCATGGAAGGAGCGTACTATGCAAAAGGAATTGGACAA
CTATCTATCAGTGGCTTTGAAGAGACTGGAAAAAGCCTACAGCGAGATCTTGAAGACGCAAAGTTATAG

Upstream 100 bases:

>100_bases
GTTGTTGTCCATCAACGATGTGATTCCGGTGATAGAGGCTTCTGCGATGCCTGAAACTAATAAACAGATTTTCCGCGTGC
TCGGTGAATTGGTGAAATAA

Downstream 100 bases:

>100_bases
TAAGGAAGCTGAAAAAGTTCAGTTGTTGAAAGAACTCGTCAAGGAACAGATTAAAAATGAAAATACTCATCCTGCAACTC
GCTAGGCTCGGGGATATCTA

Product: putative lipopolysaccharide heptosyltransferase-I

Products: NA

Alternate protein names: Lipopolysaccharide Biosynthesis Protein; Lipopolysaccharide Heptosyltransferase

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MKILVVSLLRLGDIIQQEPLLRGLREKHPTAEIHLLMNRQFANVERILHGVVDKYIHFDRETLQRGLGESGFNILYSYSV
LEELVQSLNGEKYDLAYNFTHNRLSAYLLGALEIPEKRGLHQEDGRFRGMDNRWLKYFNDRFSGSQKSLFHYVELLGNSF
NLPVRPQAAGVRKKSKSILFQCLTSQTAKNWGLDNFVQLKRTIEMALVDYKVQILGAPFERETLLTAFSEKDLLICDLSE
ARKHLQDCALLVTGDTSIKHLAAQMGVPLVELVLGTSDAVKTGAFSENARILTEDITVERVFGEVWDELSGESKNIENTA
GSLERVTWKLYLDKGSRDAEPAYVAALQQLLDSHPEKNLLQALSGYQEKTQVYLSWQKRIIAALPSREVLASRKAVSAND
VAELILVAQDIIKSKKDDAGYFQGFVESLLARYSQATQILDRVQADLEDQAELLAIRETLTRHLQSLSMEGAYYAKGIGQ
LSISGFEETGKSLQRDLEDAKL

Sequences:

>Translated_502_residues
MKILVVSLLRLGDIIQQEPLLRGLREKHPTAEIHLLMNRQFANVERILHGVVDKYIHFDRETLQRGLGESGFNILYSYSV
LEELVQSLNGEKYDLAYNFTHNRLSAYLLGALEIPEKRGLHQEDGRFRGMDNRWLKYFNDRFSGSQKSLFHYVELLGNSF
NLPVRPQAAGVRKKSKSILFQCLTSQTAKNWGLDNFVQLKRTIEMALVDYKVQILGAPFERETLLTAFSEKDLLICDLSE
ARKHLQDCALLVTGDTSIKHLAAQMGVPLVELVLGTSDAVKTGAFSENARILTEDITVERVFGEVWDELSGESKNIENTA
GSLERVTWKLYLDKGSRDAEPAYVAALQQLLDSHPEKNLLQALSGYQEKTQVYLSWQKRIIAALPSREVLASRKAVSAND
VAELILVAQDIIKSKKDDAGYFQGFVESLLARYSQATQILDRVQADLEDQAELLAIRETLTRHLQSLSMEGAYYAKGIGQ
LSISGFEETGKSLQRDLEDAKL
>Mature_502_residues
MKILVVSLLRLGDIIQQEPLLRGLREKHPTAEIHLLMNRQFANVERILHGVVDKYIHFDRETLQRGLGESGFNILYSYSV
LEELVQSLNGEKYDLAYNFTHNRLSAYLLGALEIPEKRGLHQEDGRFRGMDNRWLKYFNDRFSGSQKSLFHYVELLGNSF
NLPVRPQAAGVRKKSKSILFQCLTSQTAKNWGLDNFVQLKRTIEMALVDYKVQILGAPFERETLLTAFSEKDLLICDLSE
ARKHLQDCALLVTGDTSIKHLAAQMGVPLVELVLGTSDAVKTGAFSENARILTEDITVERVFGEVWDELSGESKNIENTA
GSLERVTWKLYLDKGSRDAEPAYVAALQQLLDSHPEKNLLQALSGYQEKTQVYLSWQKRIIAALPSREVLASRKAVSAND
VAELILVAQDIIKSKKDDAGYFQGFVESLLARYSQATQILDRVQADLEDQAELLAIRETLTRHLQSLSMEGAYYAKGIGQ
LSISGFEETGKSLQRDLEDAKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56626; Mature: 56626

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVVSLLRLGDIIQQEPLLRGLREKHPTAEIHLLMNRQFANVERILHGVVDKYIHFDR
CHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCH
ETLQRGLGESGFNILYSYSVLEELVQSLNGEKYDLAYNFTHNRLSAYLLGALEIPEKRGL
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCHHCCC
HQEDGRFRGMDNRWLKYFNDRFSGSQKSLFHYVELLGNSFNLPVRPQAAGVRKKSKSILF
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHH
QCLTSQTAKNWGLDNFVQLKRTIEMALVDYKVQILGAPFERETLLTAFSEKDLLICDLSE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCEEEEEHHH
ARKHLQDCALLVTGDTSIKHLAAQMGVPLVELVLGTSDAVKTGAFSENARILTEDITVER
HHHHHHHCEEEEECCHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCCEEEEHHHHHHH
VFGEVWDELSGESKNIENTAGSLERVTWKLYLDKGSRDAEPAYVAALQQLLDSHPEKNLL
HHHHHHHHHCCCCCCCHHHHCHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHH
QALSGYQEKTQVYLSWQKRIIAALPSREVLASRKAVSANDVAELILVAQDIIKSKKDDAG
HHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHH
YFQGFVESLLARYSQATQILDRVQADLEDQAELLAIRETLTRHLQSLSMEGAYYAKGIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
LSISGFEETGKSLQRDLEDAKL
EEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILVVSLLRLGDIIQQEPLLRGLREKHPTAEIHLLMNRQFANVERILHGVVDKYIHFDR
CHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCH
ETLQRGLGESGFNILYSYSVLEELVQSLNGEKYDLAYNFTHNRLSAYLLGALEIPEKRGL
HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCHHCCC
HQEDGRFRGMDNRWLKYFNDRFSGSQKSLFHYVELLGNSFNLPVRPQAAGVRKKSKSILF
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHCHHHHHHHHHH
QCLTSQTAKNWGLDNFVQLKRTIEMALVDYKVQILGAPFERETLLTAFSEKDLLICDLSE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCEEEEEHHH
ARKHLQDCALLVTGDTSIKHLAAQMGVPLVELVLGTSDAVKTGAFSENARILTEDITVER
HHHHHHHCEEEEECCHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCCEEEEHHHHHHH
VFGEVWDELSGESKNIENTAGSLERVTWKLYLDKGSRDAEPAYVAALQQLLDSHPEKNLL
HHHHHHHHHCCCCCCCHHHHCHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHH
QALSGYQEKTQVYLSWQKRIIAALPSREVLASRKAVSANDVAELILVAQDIIKSKKDDAG
HHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHH
YFQGFVESLLARYSQATQILDRVQADLEDQAELLAIRETLTRHLQSLSMEGAYYAKGIGQ
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
LSISGFEETGKSLQRDLEDAKL
EEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA