| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is thiQ [H]
Identifier: 42522189
GI number: 42522189
Start: 552371
End: 552997
Strand: Direct
Name: thiQ [H]
Synonym: Bd0595
Alternate gene names: 42522189
Gene position: 552371-552997 (Clockwise)
Preceding gene: 42522188
Following gene: 42522191
Centisome position: 14.6
GC content: 53.43
Gene sequence:
>627_bases TTGGTCGAAAATTTGCACCGTGATTACGGAGACTTCAAGTTAGACATCGATTCCTGGGAAATCCTGGATGAAGGTGTCAC TGTGCTATGGGGGCCGTCAGGCTCCGGGAAAACCTCGGTGTTTCGCATTTTGCTGGGGCTGGAAAGCTGCCCGGGATTTA AATGGACGTATCAGGGAACGGATCTGGCCAAGTTGAAAACTCCGGATCGTCATCTGGGTGTGGTGTTTCAGACTTTGGAT CTATTTCCGCACTTGAGTGCTGAAGAAAACTTGATGTTTGCGGCCCGCGCCCGCAAAGTGGATCCAGCCAAAGCCAACGC GCGTTTGAAAGAACTGTCATCGATCCTTAAAATGGAATCCTTCCTACAAAGACCGGCCGCGGTGTTGTCGGGCGGGGAAA AACAGCGGGTCGCCATTGCGCGGGCGTTGATGGGCGAACCGCGGTTGCTTTTGTTGGATGAACCGTTTTCCGCCTTGGAT CAGGAGTTGCGGGATGAAAGCCGCAAGCTGGTGAAAAGTGTGATTGAGACTGAGAAAATTCCGACGTTGTTAGTGACCCA TGACCAGCGGGACGTGGAGATCCTGGGCAACAAGGTCACCACCATTCGCAACGGCCGCCTCGCTTAG
Upstream 100 bases:
>100_bases ATGTCAGGTTATCGCCTGAATCAGGCCATTGTTCTTAGCAGTTTGATTATTGTCGCCGGTTTGATTTGTTTTGCATTGTG TGTGGGAGGCAGCCGTGTCC
Downstream 100 bases:
>100_bases CCGGCTGGTGAAAAAGGGCCATCCGACTGCGTTGTCGGGCGGCCTTCTCGCTCCGACGTGCTTGGAGCACGCCTGCGCTG CGAGGGCCTACTCCGCCTTG
Product: ABC-type thiamine transport protein, ATP-binding
Products: NA
Alternate protein names: Sulfate-transporting ATPase 2 [H]
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MVENLHRDYGDFKLDIDSWEILDEGVTVLWGPSGSGKTSVFRILLGLESCPGFKWTYQGTDLAKLKTPDRHLGVVFQTLD LFPHLSAEENLMFAARARKVDPAKANARLKELSSILKMESFLQRPAAVLSGGEKQRVAIARALMGEPRLLLLDEPFSALD QELRDESRKLVKSVIETEKIPTLLVTHDQRDVEILGNKVTTIRNGRLA
Sequences:
>Translated_208_residues MVENLHRDYGDFKLDIDSWEILDEGVTVLWGPSGSGKTSVFRILLGLESCPGFKWTYQGTDLAKLKTPDRHLGVVFQTLD LFPHLSAEENLMFAARARKVDPAKANARLKELSSILKMESFLQRPAAVLSGGEKQRVAIARALMGEPRLLLLDEPFSALD QELRDESRKLVKSVIETEKIPTLLVTHDQRDVEILGNKVTTIRNGRLA >Mature_208_residues MVENLHRDYGDFKLDIDSWEILDEGVTVLWGPSGSGKTSVFRILLGLESCPGFKWTYQGTDLAKLKTPDRHLGVVFQTLD LFPHLSAEENLMFAARARKVDPAKANARLKELSSILKMESFLQRPAAVLSGGEKQRVAIARALMGEPRLLLLDEPFSALD QELRDESRKLVKSVIETEKIPTLLVTHDQRDVEILGNKVTTIRNGRLA
Specific function: Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system [H]
COG id: COG1118
COG function: function code P; ABC-type sulfate/molybdate transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=180, Percent_Identity=31.6666666666667, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI47078218, Length=180, Percent_Identity=31.6666666666667, Blast_Score=84, Evalue=9e-17, Organism=Homo sapiens, GI27262624, Length=200, Percent_Identity=30, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI27262626, Length=200, Percent_Identity=30, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI171184400, Length=213, Percent_Identity=31.924882629108, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI153792144, Length=194, Percent_Identity=28.8659793814433, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI21536376, Length=212, Percent_Identity=27.8301886792453, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI27477115, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI27436953, Length=179, Percent_Identity=28.4916201117318, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI150417984, Length=182, Percent_Identity=29.6703296703297, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI27881501, Length=207, Percent_Identity=29.4685990338164, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI30795238, Length=207, Percent_Identity=29.4685990338164, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI116734710, Length=190, Percent_Identity=27.8947368421053, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI42741659, Length=199, Percent_Identity=30.6532663316583, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI105990541, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI148612844, Length=198, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI255708477, Length=198, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI9955963, Length=212, Percent_Identity=27.3584905660377, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI9961252, Length=199, Percent_Identity=30.1507537688442, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI4505771, Length=199, Percent_Identity=30.1507537688442, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI9955966, Length=179, Percent_Identity=34.0782122905028, Blast_Score=64, Evalue=7e-11, Organism=Homo sapiens, GI45243524, Length=179, Percent_Identity=34.0782122905028, Blast_Score=64, Evalue=7e-11, Organism=Homo sapiens, GI6005701, Length=179, Percent_Identity=24.0223463687151, Blast_Score=64, Evalue=8e-11, Organism=Homo sapiens, GI9955968, Length=179, Percent_Identity=34.0782122905028, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1787370, Length=194, Percent_Identity=38.1443298969072, Blast_Score=143, Evalue=9e-36, Organism=Escherichia coli, GI1788761, Length=216, Percent_Identity=36.5740740740741, Blast_Score=140, Evalue=4e-35, Organism=Escherichia coli, GI87081791, Length=207, Percent_Identity=33.8164251207729, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1787712, Length=206, Percent_Identity=36.8932038834951, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI87081709, Length=182, Percent_Identity=36.2637362637363, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1790467, Length=198, Percent_Identity=34.3434343434343, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI87082267, Length=186, Percent_Identity=33.8709677419355, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1787089, Length=211, Percent_Identity=36.0189573459716, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1787029, Length=213, Percent_Identity=35.6807511737089, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788053, Length=180, Percent_Identity=40, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1786872, Length=215, Percent_Identity=36.2790697674419, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1786253, Length=185, Percent_Identity=31.8918918918919, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1786563, Length=215, Percent_Identity=32.093023255814, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87081834, Length=217, Percent_Identity=29.9539170506912, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1788450, Length=165, Percent_Identity=34.5454545454545, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1788225, Length=222, Percent_Identity=33.7837837837838, Blast_Score=91, Evalue=4e-20, Organism=Escherichia coli, GI1786703, Length=175, Percent_Identity=36, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789672, Length=219, Percent_Identity=29.6803652968037, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787105, Length=217, Percent_Identity=30.4147465437788, Blast_Score=86, Evalue=1e-18, Organism=Escherichia coli, GI1789032, Length=203, Percent_Identity=27.5862068965517, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787164, Length=178, Percent_Identity=33.1460674157303, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1789891, Length=198, Percent_Identity=35.3535353535354, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI87081782, Length=208, Percent_Identity=27.8846153846154, Blast_Score=81, Evalue=4e-17, Organism=Escherichia coli, GI1786698, Length=181, Percent_Identity=33.1491712707182, Blast_Score=81, Evalue=4e-17, Organism=Escherichia coli, GI1786981, Length=210, Percent_Identity=33.8095238095238, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786319, Length=181, Percent_Identity=31.4917127071823, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786398, Length=184, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788506, Length=190, Percent_Identity=33.1578947368421, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790544, Length=224, Percent_Identity=27.6785714285714, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789593, Length=201, Percent_Identity=26.865671641791, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787792, Length=218, Percent_Identity=28.8990825688073, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1789873, Length=191, Percent_Identity=28.2722513089005, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1789962, Length=201, Percent_Identity=31.8407960199005, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI48994943, Length=165, Percent_Identity=29.0909090909091, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1788644, Length=151, Percent_Identity=33.112582781457, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1789864, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI145693107, Length=207, Percent_Identity=29.951690821256, Blast_Score=64, Evalue=5e-12, Organism=Escherichia coli, GI1790162, Length=207, Percent_Identity=29.951690821256, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1787500, Length=197, Percent_Identity=27.4111675126904, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787758, Length=184, Percent_Identity=27.1739130434783, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1788897, Length=200, Percent_Identity=29.5, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1790190, Length=189, Percent_Identity=25.3968253968254, Blast_Score=61, Evalue=5e-11, Organism=Escherichia coli, GI1789963, Length=230, Percent_Identity=26.9565217391304, Blast_Score=61, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17565586, Length=189, Percent_Identity=31.7460317460317, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI212646699, Length=187, Percent_Identity=34.2245989304813, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17510237, Length=208, Percent_Identity=25.4807692307692, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115534520, Length=220, Percent_Identity=30.4545454545455, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533608, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193211017, Length=195, Percent_Identity=31.7948717948718, Blast_Score=73, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71996809, Length=195, Percent_Identity=31.7948717948718, Blast_Score=73, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17555800, Length=186, Percent_Identity=28.494623655914, Blast_Score=73, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193211015, Length=195, Percent_Identity=31.7948717948718, Blast_Score=73, Evalue=9e-14, Organism=Caenorhabditis elegans, GI25146777, Length=188, Percent_Identity=30.8510638297872, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193208177, Length=198, Percent_Identity=29.2929292929293, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71983523, Length=184, Percent_Identity=28.2608695652174, Blast_Score=70, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71983516, Length=184, Percent_Identity=28.2608695652174, Blast_Score=70, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71983510, Length=183, Percent_Identity=28.4153005464481, Blast_Score=70, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71992290, Length=195, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17541710, Length=194, Percent_Identity=30.4123711340206, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115533592, Length=190, Percent_Identity=30, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17558664, Length=189, Percent_Identity=30.6878306878307, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320296, Length=198, Percent_Identity=28.2828282828283, Blast_Score=65, Evalue=7e-12, Organism=Drosophila melanogaster, GI24666092, Length=208, Percent_Identity=28.8461538461538, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI221512771, Length=207, Percent_Identity=27.0531400966184, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI28573573, Length=214, Percent_Identity=24.7663551401869, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI28573571, Length=214, Percent_Identity=24.7663551401869, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24643674, Length=193, Percent_Identity=24.3523316062176, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24659289, Length=218, Percent_Identity=30.7339449541284, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI24581191, Length=186, Percent_Identity=27.4193548387097, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581189, Length=186, Percent_Identity=27.4193548387097, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581193, Length=186, Percent_Identity=27.4193548387097, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24581195, Length=186, Percent_Identity=27.4193548387097, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI23397593, Length=204, Percent_Identity=29.9019607843137, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI28574150, Length=193, Percent_Identity=28.4974093264249, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007328, Length=193, Percent_Identity=28.4974093264249, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24648314, Length=190, Percent_Identity=25.2631578947368, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014769 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR005666 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.25 [H]
Molecular weight: Translated: 23308; Mature: 23308
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVENLHRDYGDFKLDIDSWEILDEGVTVLWGPSGSGKTSVFRILLGLESCPGFKWTYQGT CCCCHHCCCCCEEEECCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCC DLAKLKTPDRHLGVVFQTLDLFPHLSAEENLMFAARARKVDPAKANARLKELSSILKMES CEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHH FLQRPAAVLSGGEKQRVAIARALMGEPRLLLLDEPFSALDQELRDESRKLVKSVIETEKI HHHCCHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC PTLLVTHDQRDVEILGNKVTTIRNGRLA CEEEEECCCCCHHHHCCEEEEECCCCCC >Mature Secondary Structure MVENLHRDYGDFKLDIDSWEILDEGVTVLWGPSGSGKTSVFRILLGLESCPGFKWTYQGT CCCCHHCCCCCEEEECCHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCC DLAKLKTPDRHLGVVFQTLDLFPHLSAEENLMFAARARKVDPAKANARLKELSSILKMES CEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHH FLQRPAAVLSGGEKQRVAIARALMGEPRLLLLDEPFSALDQELRDESRKLVKSVIETEKI HHHCCHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC PTLLVTHDQRDVEILGNKVTTIRNGRLA CEEEEECCCCCHHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]