| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is menA
Identifier: 42522156
GI number: 42522156
Start: 516447
End: 517514
Strand: Direct
Name: menA
Synonym: Bd0558
Alternate gene names: NA
Gene position: 516447-517514 (Clockwise)
Preceding gene: 42522155
Following gene: 42522157
Centisome position: 13.65
GC content: 51.5
Gene sequence:
>1068_bases GTGAGTGAACTGATCACGCTTTCCAAAAAAGACGCCCAGTTTGAATCCTATTTGCTGGGGACGTTCTCCAAAACACACCG GGCTCTGCCGCAGCAGACCCTGAACGTCAATTCCGCGTCGGAGCTGGTGACGTTTCGTGTGCTGCCGTTAAACGAGATCA CCAAACCTTCTTTCTGGGCCAAGATGTCCCAGATTTACAAGGTGCGCACCTTCCTTCTGATCTTTCTGCCGCTGTTTCTG ATTCTGACCAAGAATATCGACGATCAAACCATGCAAGATCCGGTGACCACGGCGATTGCCACCATCGGTGTTTTGCTGGC GTTTATCTCCATTAACTTGCGCAACGACTATATGGACCATATGAAGGGTGTTGATCGAGTGCTGGAACGTTCCGGCAGCC GTGCCATCCAAAATGGCTGGATCACGGCTGCTCAGGTGAAACATCTTTCCTCTTTCTTCCTTTTCATGGCGCTGGTGTGT GCGGTGCCACTGCTGTTTGCTTTCCCGCAACTGGCGGGGATCTTTGCGGTCAGTCTGGTTGTCGGCTTGTGGGCTCAGTT TAAAAAACAGAATTCCTTCAAGTACCGCATCGGGGGTGAATTCGCTCTGTTTGTGATGCTGGGGCCTTTGTTGACTGTGG GCTTTCAGATCGCGATGGGGGTTCCGGGGGATGTGGAAGCGTTCTGGCTGGGCTGTGTGTGGGGTTGGCTGGTGCTCTTT GTTGTGCACCTTAGAAACTTCATGAATATCTTCCCCAGCAGTCAGGCGGGATTCACGAACACCGTGAACTGGCTGGGTTT TGATAAGGCCCGTCGTCTGATTGCCGGCTGGTGGATTCTGTTCCTGGTTTTCAATCTGACCTATCATCTGACATACGCTG GTTTTTACTGGGGTGTCTATCTGACGGTGGTTCTGGCTTTTGCCTCTGTGGGTTTCATCTATAAGTTGAAAAATATCTCA AGCCCCGTGGGCAGTGAGATGCGCAAGGTGTTCCGCTCTGGTTTTTATCTGTTCCTGATCGCCATTGGCATGTGGGTCTT TGAGTGTCTTTGGTATCTGCTTCGCTAG
Upstream 100 bases:
>100_bases ATCTGGAGCGCCTGAAGTCCCTGTTGAAGCCGGGCGAAGAAAAGCTGATTGATCAACTGCGCCCGCTGACCGAGATTTTG TACTGGAGAAGGAAGCCTTC
Downstream 100 bases:
>100_bases ACGGCGGCCTCCGCATTTGTGTTCGGGCTTCCGCCCCGGAAGTCCACGACAAGGCTGTCGCCTGGGCGTCTTTTCTGAAG GCGCCACTGAACCCTGAAAA
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWAKMSQIYKVRTFLLIFLPLFL ILTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDHMKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVC AVPLLFAFPQLAGIFAVSLVVGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLF VVHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVYLTVVLAFASVGFIYKLKNIS SPVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR
Sequences:
>Translated_355_residues MSELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWAKMSQIYKVRTFLLIFLPLFL ILTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDHMKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVC AVPLLFAFPQLAGIFAVSLVVGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLF VVHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVYLTVVLAFASVGFIYKLKNIS SPVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR >Mature_354_residues SELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWAKMSQIYKVRTFLLIFLPLFLI LTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDHMKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVCA VPLLFAFPQLAGIFAVSLVVGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLFV VHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVYLTVVLAFASVGFIYKLKNISS PVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40418; Mature: 40287
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWA CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHEEEEECCHHCCCCHHHH KMSQIYKVRTFLLIFLPLFLILTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDH HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVCAVPLLFAFPQLAGIFAVSLV HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLF HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VVHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVY HHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTVVLAFASVGFIYKLKNISSPVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SELITLSKKDAQFESYLLGTFSKTHRALPQQTLNVNSASELVTFRVLPLNEITKPSFWA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHEEEEECCHHCCCCHHHH KMSQIYKVRTFLLIFLPLFLILTKNIDDQTMQDPVTTAIATIGVLLAFISINLRNDYMDH HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKGVDRVLERSGSRAIQNGWITAAQVKHLSSFFLFMALVCAVPLLFAFPQLAGIFAVSLV HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGLWAQFKKQNSFKYRIGGEFALFVMLGPLLTVGFQIAMGVPGDVEAFWLGCVWGWLVLF HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VVHLRNFMNIFPSSQAGFTNTVNWLGFDKARRLIAGWWILFLVFNLTYHLTYAGFYWGVY HHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTVVLAFASVGFIYKLKNISSPVGSEMRKVFRSGFYLFLIAIGMWVFECLWYLLR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA