| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522102
Identifier: 42522102
GI number: 42522102
Start: 462638
End: 462898
Strand: Direct
Name: 42522102
Synonym: Bd0495
Alternate gene names: NA
Gene position: 462638-462898 (Clockwise)
Preceding gene: 42522101
Following gene: 42522104
Centisome position: 12.23
GC content: 48.66
Gene sequence:
>261_bases ATGAGTGGGGTTGGGTTTTTCTTTTCGATAGTCGTGATGACATTCATGGTTCTGGGGCCGACGTCGGCTTATGCCGGCAA GGTCGAGTCCATTCAGGAAGTCATAGAAAAAAAATGCAGGAAAAAGATCAGCTATGAAGAGGCGCTGTCTTTGATTCGTC CTTTGTATCTGACCTGTGTGCCGGGAACGAAAGTGACTGTATACGACAGCTGTCAGGTCAAGTGCCTGAAGCCCAATTCG GGTGCTGTCATCGGACGATAA
Upstream 100 bases:
>100_bases GCCAGCAAAACTACAGCTCTTTGCCATTGGGATTCGGTCCGGTGCAGAGCACGGATCGTATTCTGAAAACCTATTACCTC AGCCTAAGAACGGATTTCTG
Downstream 100 bases:
>100_bases AAAAAACGCCTCTTTCGAGGCGTTTTTCGTTTCATCTTGAAAGCTCTGTTAACAACAGATTACTTCGTGCAAGACAATGG GTAGATGTTACCGTTAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSGVGFFFSIVVMTFMVLGPTSAYAGKVESIQEVIEKKCRKKISYEEALSLIRPLYLTCVPGTKVTVYDSCQVKCLKPNS GAVIGR
Sequences:
>Translated_86_residues MSGVGFFFSIVVMTFMVLGPTSAYAGKVESIQEVIEKKCRKKISYEEALSLIRPLYLTCVPGTKVTVYDSCQVKCLKPNS GAVIGR >Mature_85_residues SGVGFFFSIVVMTFMVLGPTSAYAGKVESIQEVIEKKCRKKISYEEALSLIRPLYLTCVPGTKVTVYDSCQVKCLKPNSG AVIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9413; Mature: 9282
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVGFFFSIVVMTFMVLGPTSAYAGKVESIQEVIEKKCRKKISYEEALSLIRPLYLTCV CCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEC PGTKVTVYDSCQVKCLKPNSGAVIGR CCCEEEEECCCEEEEECCCCCCCCCC >Mature Secondary Structure SGVGFFFSIVVMTFMVLGPTSAYAGKVESIQEVIEKKCRKKISYEEALSLIRPLYLTCV CCHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEC PGTKVTVYDSCQVKCLKPNSGAVIGR CCCEEEEECCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA