Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522104

Identifier: 42522104

GI number: 42522104

Start: 463565

End: 465409

Strand: Direct

Name: 42522104

Synonym: Bd0498

Alternate gene names: NA

Gene position: 463565-465409 (Clockwise)

Preceding gene: 42522102

Following gene: 42522105

Centisome position: 12.25

GC content: 51.49

Gene sequence:

>1845_bases
GTGAACAGCTTGATTTCATCTTTGGTCGTCATCTTATTTTTCCAAACTGCTATTGCACAAGAGGCAGCACAGCCCACCCC
TCCGGCGGCGGCTCCAGTCGCGGCTTCTGCGGAGACTCCTGAAAAAGCCGAGAAAAAAGAAACAGAGTTTTCAAGACCTC
TGTTTTTTTCTGTGATGGATCAAGAGCTTAAAATCAAGAATCCCGTGGTCGAATACGATTTGAAAAAATCCAAGGGCAAG
CAGCTTGAAATGGGCGGTCTGGTTTTCGACAACCAGTCGCTGTCTGCCAAAGTAGAAAACAACACACTGAATCTGACCTG
GAATCATGAACTGGTTCCTGGCGGAGACGTGTCTGTGATCAATCAGCAGGGGAAAGAGTTGTGGAAGCAGCCCGTGAAGG
GAACTGGCAGCTGGTCTTACTCCGGGATCCAGGAAAGCAAAGGCCCGCAGTGGAAGGACGGCGAACGATTCCGTTTCTGT
CTTCGTGCGGAAGCCGGCAGGGGTTATTCGAGCATCTGTTCCCAGTGGTACGGGGTTGAGATCAAAGAAGGCAGCGTCCA
AATCGGTGTGACCAAATCAGAAGCCAGCCCTCGTGTGATTTTCCAGAATGAAGAAAAGAAACTGCAGGGGGCCGAGGAAG
TGGCGGTGGGAACTCCGGTTCAGTTCCTGGCGACGCTGGATTCTGATGCGACCTATGAATTCGTTTCTGAGCCAGTGGCG
CCTGTGATTCGTGACATGATCGAATCTGAAAAGAAATCCGGTGATGTGACCCTGACCGGGGATCTGCCGAAGCCATTGAA
GCTGGAATCCGAAAGTATTGCCGGCGAAGACTATGGTGCTGTGACTAAAATACTGGGCTTTGAAAGCACGATCGGGGCCC
GCGCCGACATGTGGAAAGCGGATGTGCCTCAGAAAAACGCCCGCCTGACATTGCCGGGAAAATCCGGTGGGGTGTTTGTC
TATAATCTGGAGATCACCGAACCACCTCGTCAGAAGGACCGCCGATTTATTTCCACGCGTGCACTGAAGGGCACTTATCT
TTCCAAGGATCAGATGCCGGTACGTGATATGGAAGACAACGTGACGGTCTGGAACTTTGAAACTCCTCAGAAGTTTGCGA
TGAACACGGTGACACTGGATGTGCCGGGTGAAAAGTCCACGCACAAATCTTATCTGGAAATCTATCGTGCCGGTGCTGGT
GAGGCCAGTTTGCGCCTGACCGGAGTTGTGACCAGTGAATCTGACTATGTGATTCTGGGGGAAGGCCACGTTTCCTGGTG
GTTTAACGATCTGTTTGGCTGGCAGAACTATTGGTTGTCGAAACAGCGCTGGGGTGTGAGTGCCAAGTACTTCACGTCCC
TGACGAATCTTCCAGCCTCCACCGCAGGCGGGAATTCAGAAGATGTGAAGCTGGCGGTGATGGATGCGGATTTGCGTTAT
CGTTTTACCCCGGGCCTGTGGGAAAAAGATGAAACCGTGGGGCTGATTGTGGCTTATGAGGCGATGACTTTGGGGGACAG
CAATGTTCCGAAGATCGGTGCGGGTCTGTTCTGGGCGCGCTCCATGCCGCGGGCGATTGACTATTGGTTCTCTAAAATTC
CATTCATGAACTATCCAAAATGGGTGGACATGGAATTCATCAAGTATTTCTCTTCCACTGACAGCGATATCACCTTGGGT
GATGACTATGTGCTGAACTTCCACGGCAAGGTGTTGTGGACTCCGCGTTTCTTTGGTGAAGCCGGGTTTGGCTTGAAGAA
CTATTATTATGAAAAGAACTCTGACGGCTCGGGTGCGAAACTGACCACCTTCTATGGCACTGTCGGGTTGGGTGTGAACT
TCTAA

Upstream 100 bases:

>100_bases
CTAGCCCTAGCACTAAGTCTTAAGTGCTCTGATTTAAAGGACTTATTCATGTTTATTAGATTATTCTTAGTGTTAACGAA
ATTTTGCATAAGGAACATCT

Downstream 100 bases:

>100_bases
CCCACGGGTAGAATGAAAAAGAAGCTGACCTTTGTCCATTTATTCCTGCTGAATCAGCTGGTGACAACCCTGGTGCTTTT
GACAGTGCTGGGGGTGTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 614; Mature: 614

Protein sequence:

>614_residues
MNSLISSLVVILFFQTAIAQEAAQPTPPAAAPVAASAETPEKAEKKETEFSRPLFFSVMDQELKIKNPVVEYDLKKSKGK
QLEMGGLVFDNQSLSAKVENNTLNLTWNHELVPGGDVSVINQQGKELWKQPVKGTGSWSYSGIQESKGPQWKDGERFRFC
LRAEAGRGYSSICSQWYGVEIKEGSVQIGVTKSEASPRVIFQNEEKKLQGAEEVAVGTPVQFLATLDSDATYEFVSEPVA
PVIRDMIESEKKSGDVTLTGDLPKPLKLESESIAGEDYGAVTKILGFESTIGARADMWKADVPQKNARLTLPGKSGGVFV
YNLEITEPPRQKDRRFISTRALKGTYLSKDQMPVRDMEDNVTVWNFETPQKFAMNTVTLDVPGEKSTHKSYLEIYRAGAG
EASLRLTGVVTSESDYVILGEGHVSWWFNDLFGWQNYWLSKQRWGVSAKYFTSLTNLPASTAGGNSEDVKLAVMDADLRY
RFTPGLWEKDETVGLIVAYEAMTLGDSNVPKIGAGLFWARSMPRAIDYWFSKIPFMNYPKWVDMEFIKYFSSTDSDITLG
DDYVLNFHGKVLWTPRFFGEAGFGLKNYYYEKNSDGSGAKLTTFYGTVGLGVNF

Sequences:

>Translated_614_residues
MNSLISSLVVILFFQTAIAQEAAQPTPPAAAPVAASAETPEKAEKKETEFSRPLFFSVMDQELKIKNPVVEYDLKKSKGK
QLEMGGLVFDNQSLSAKVENNTLNLTWNHELVPGGDVSVINQQGKELWKQPVKGTGSWSYSGIQESKGPQWKDGERFRFC
LRAEAGRGYSSICSQWYGVEIKEGSVQIGVTKSEASPRVIFQNEEKKLQGAEEVAVGTPVQFLATLDSDATYEFVSEPVA
PVIRDMIESEKKSGDVTLTGDLPKPLKLESESIAGEDYGAVTKILGFESTIGARADMWKADVPQKNARLTLPGKSGGVFV
YNLEITEPPRQKDRRFISTRALKGTYLSKDQMPVRDMEDNVTVWNFETPQKFAMNTVTLDVPGEKSTHKSYLEIYRAGAG
EASLRLTGVVTSESDYVILGEGHVSWWFNDLFGWQNYWLSKQRWGVSAKYFTSLTNLPASTAGGNSEDVKLAVMDADLRY
RFTPGLWEKDETVGLIVAYEAMTLGDSNVPKIGAGLFWARSMPRAIDYWFSKIPFMNYPKWVDMEFIKYFSSTDSDITLG
DDYVLNFHGKVLWTPRFFGEAGFGLKNYYYEKNSDGSGAKLTTFYGTVGLGVNF
>Mature_614_residues
MNSLISSLVVILFFQTAIAQEAAQPTPPAAAPVAASAETPEKAEKKETEFSRPLFFSVMDQELKIKNPVVEYDLKKSKGK
QLEMGGLVFDNQSLSAKVENNTLNLTWNHELVPGGDVSVINQQGKELWKQPVKGTGSWSYSGIQESKGPQWKDGERFRFC
LRAEAGRGYSSICSQWYGVEIKEGSVQIGVTKSEASPRVIFQNEEKKLQGAEEVAVGTPVQFLATLDSDATYEFVSEPVA
PVIRDMIESEKKSGDVTLTGDLPKPLKLESESIAGEDYGAVTKILGFESTIGARADMWKADVPQKNARLTLPGKSGGVFV
YNLEITEPPRQKDRRFISTRALKGTYLSKDQMPVRDMEDNVTVWNFETPQKFAMNTVTLDVPGEKSTHKSYLEIYRAGAG
EASLRLTGVVTSESDYVILGEGHVSWWFNDLFGWQNYWLSKQRWGVSAKYFTSLTNLPASTAGGNSEDVKLAVMDADLRY
RFTPGLWEKDETVGLIVAYEAMTLGDSNVPKIGAGLFWARSMPRAIDYWFSKIPFMNYPKWVDMEFIKYFSSTDSDITLG
DDYVLNFHGKVLWTPRFFGEAGFGLKNYYYEKNSDGSGAKLTTFYGTVGLGVNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68366; Mature: 68366

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLISSLVVILFFQTAIAQEAAQPTPPAAAPVAASAETPEKAEKKETEFSRPLFFSVMD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC
QELKIKNPVVEYDLKKSKGKQLEMGGLVFDNQSLSAKVENNTLNLTWNHELVPGGDVSVI
CCCCCCCCEEEEECCCCCCCEEEECCEEECCCCCEEEEECCEEEEEECCEECCCCCEEHE
NQQGKELWKQPVKGTGSWSYSGIQESKGPQWKDGERFRFCLRAEAGRGYSSICSQWYGVE
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCE
IKEGSVQIGVTKSEASPRVIFQNEEKKLQGAEEVAVGTPVQFLATLDSDATYEFVSEPVA
EECCCEEEEEEECCCCCEEEEECCHHHHCCCHHHCCCCCCEEEEECCCCCCHHHHHCCHH
PVIRDMIESEKKSGDVTLTGDLPKPLKLESESIAGEDYGAVTKILGFESTIGARADMWKA
HHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
DVPQKNARLTLPGKSGGVFVYNLEITEPPRQKDRRFISTRALKGTYLSKDQMPVRDMEDN
CCCCCCCEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
VTVWNFETPQKFAMNTVTLDVPGEKSTHKSYLEIYRAGAGEASLRLTGVVTSESDYVILG
EEEEECCCCHHHEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEE
EGHVSWWFNDLFGWQNYWLSKQRWGVSAKYFTSLTNLPASTAGGNSEDVKLAVMDADLRY
CCCEEEHHHHHCCHHHHCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEE
RFTPGLWEKDETVGLIVAYEAMTLGDSNVPKIGAGLFWARSMPRAIDYWFSKIPFMNYPK
EECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCC
WVDMEFIKYFSSTDSDITLGDDYVLNFHGKVLWTPRFFGEAGFGLKNYYYEKNSDGSGAK
CCCHHHHHHHCCCCCCEEECCCEEEEECCEEEECCHHCCCCCCCHHHEEEECCCCCCCCE
LTTFYGTVGLGVNF
EEEEEEEEECCCCC
>Mature Secondary Structure
MNSLISSLVVILFFQTAIAQEAAQPTPPAAAPVAASAETPEKAEKKETEFSRPLFFSVMD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECC
QELKIKNPVVEYDLKKSKGKQLEMGGLVFDNQSLSAKVENNTLNLTWNHELVPGGDVSVI
CCCCCCCCEEEEECCCCCCCEEEECCEEECCCCCEEEEECCEEEEEECCEECCCCCEEHE
NQQGKELWKQPVKGTGSWSYSGIQESKGPQWKDGERFRFCLRAEAGRGYSSICSQWYGVE
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCE
IKEGSVQIGVTKSEASPRVIFQNEEKKLQGAEEVAVGTPVQFLATLDSDATYEFVSEPVA
EECCCEEEEEEECCCCCEEEEECCHHHHCCCHHHCCCCCCEEEEECCCCCCHHHHHCCHH
PVIRDMIESEKKSGDVTLTGDLPKPLKLESESIAGEDYGAVTKILGFESTIGARADMWKA
HHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
DVPQKNARLTLPGKSGGVFVYNLEITEPPRQKDRRFISTRALKGTYLSKDQMPVRDMEDN
CCCCCCCEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
VTVWNFETPQKFAMNTVTLDVPGEKSTHKSYLEIYRAGAGEASLRLTGVVTSESDYVILG
EEEEECCCCHHHEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEE
EGHVSWWFNDLFGWQNYWLSKQRWGVSAKYFTSLTNLPASTAGGNSEDVKLAVMDADLRY
CCCEEEHHHHHCCHHHHCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEE
RFTPGLWEKDETVGLIVAYEAMTLGDSNVPKIGAGLFWARSMPRAIDYWFSKIPFMNYPK
EECCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCCCCCC
WVDMEFIKYFSSTDSDITLGDDYVLNFHGKVLWTPRFFGEAGFGLKNYYYEKNSDGSGAK
CCCHHHHHHHCCCCCCEEECCCEEEEECCEEEECCHHCCCCCCCHHHEEEECCCCCCCCE
LTTFYGTVGLGVNF
EEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA