Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522070

Identifier: 42522070

GI number: 42522070

Start: 434103

End: 435251

Strand: Direct

Name: 42522070

Synonym: Bd0462

Alternate gene names: NA

Gene position: 434103-435251 (Clockwise)

Preceding gene: 42522065

Following gene: 42522075

Centisome position: 11.48

GC content: 51.17

Gene sequence:

>1149_bases
ATGGCAAATAATCTTCCGCGTTGGGCGTGTGTCGCTCTGTCTATTTTTTCGATTTCATTGCCAGCTCTGGCTGTGGATAA
CTACAAGGAATTTCGCCGGGATCACTGGGATTTTGAGGTGAATGCCAACTATTTCTATTCTGAGGCCAATTATCCGGCTT
CAGGGGGCGGCAGTCAGAGCCTGGTCAGTGGTAACAGCTACTCGTTAATCGACACTTCTTTTGGGACTCGCTATGTTCCG
AAAAGAAACTGGTCGATTCTGGGCTGGGGAACGATCAGCAATGCGGAAAGCAAGGACTCGGTCGCCACTCGTTCCAACAG
TTCGATCAGTGAAGCGGCTGTGGGCTTTGATTTCCTGATGTATTCCGACGCATTTCAGCTGATTCCGGAAGTCATCGCGG
TCATGCCCTTTGAAGAGGTCAACCCTGCTTCGGATACCGTACTGAATTCAGAAGGTGTTTTTGAGGTTCGCTCCCGTTTG
ATTGCACAAAAAGACTTCGGAACTCTGCGCGGCTATGGCTGGCTGGGTTTCAATTATCGCGGCAGTGGCCGCTCATTCCT
GATGCCTTGGGGGGTGGGGGCGCAGATGAAGCTGCAGCGACTGCGTTTGGGAGCCGAGCTTTTCGGTTATCAAAGTGTTT
CTGATGACACCACGGACGTGACTGAAGCTTTGCGAACTTCTTACATCAACAGCGTCAATGCGGGTTCAATGAAATTCTAT
TCTGTGAAACCGAATTTGATGGACAGTCAGCTGTATGCAACCTGGCTGATCAGTCCGAAGTTGAGTGTGCAGGCCAATGG
GGGCATGACGCTGACGGGCTCTAATTCGGCGGCGGGCTTCCATGTCGGTGGTTTCATCCGCTACAGCTTTGATATGAGCG
AGGGTTATTCAGAGCCGGACTATGTTCCTCCGGTTGAAAACCCGGTGCCGAACTACCGCTCCAATATGTATGAAGAAAGC
GATTTGAGCTCCGAAAAGAAAGTCCGCCGCTTTAAAGAGCAGACAAGCGACGGTGTGGATCAGAACCTGTTCAAGCCCCG
TCCGACTGCGCCGAAAAAGCGTCCGCGGGTGGATGATGAATTGCAACAGCAGCTGGATGATACGGAATTCCAGATCGAGC
TGAAATCCAACAAAAAGAAACGTCGTTAG

Upstream 100 bases:

>100_bases
AAGCCCACTAAATACAGGAAAACAGTGAAAAAGATGATGGCCAGCTGTGATTTGTTTGATGTCGCAGTCATAGGGTTGTT
AATATTAGGAAGTTATGAAA

Downstream 100 bases:

>100_bases
TTTTAGGGAAGCCTCAGTGCTTCCCTTGTTTTTTCCACATCAAGACCTGCCAGCTCCACCACCTTGTGGCGTCCGGTTTC
GCCTTTGATCAAATGCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MANNLPRWACVALSIFSISLPALAVDNYKEFRRDHWDFEVNANYFYSEANYPASGGGSQSLVSGNSYSLIDTSFGTRYVP
KRNWSILGWGTISNAESKDSVATRSNSSISEAAVGFDFLMYSDAFQLIPEVIAVMPFEEVNPASDTVLNSEGVFEVRSRL
IAQKDFGTLRGYGWLGFNYRGSGRSFLMPWGVGAQMKLQRLRLGAELFGYQSVSDDTTDVTEALRTSYINSVNAGSMKFY
SVKPNLMDSQLYATWLISPKLSVQANGGMTLTGSNSAAGFHVGGFIRYSFDMSEGYSEPDYVPPVENPVPNYRSNMYEES
DLSSEKKVRRFKEQTSDGVDQNLFKPRPTAPKKRPRVDDELQQQLDDTEFQIELKSNKKKRR

Sequences:

>Translated_382_residues
MANNLPRWACVALSIFSISLPALAVDNYKEFRRDHWDFEVNANYFYSEANYPASGGGSQSLVSGNSYSLIDTSFGTRYVP
KRNWSILGWGTISNAESKDSVATRSNSSISEAAVGFDFLMYSDAFQLIPEVIAVMPFEEVNPASDTVLNSEGVFEVRSRL
IAQKDFGTLRGYGWLGFNYRGSGRSFLMPWGVGAQMKLQRLRLGAELFGYQSVSDDTTDVTEALRTSYINSVNAGSMKFY
SVKPNLMDSQLYATWLISPKLSVQANGGMTLTGSNSAAGFHVGGFIRYSFDMSEGYSEPDYVPPVENPVPNYRSNMYEES
DLSSEKKVRRFKEQTSDGVDQNLFKPRPTAPKKRPRVDDELQQQLDDTEFQIELKSNKKKRR
>Mature_381_residues
ANNLPRWACVALSIFSISLPALAVDNYKEFRRDHWDFEVNANYFYSEANYPASGGGSQSLVSGNSYSLIDTSFGTRYVPK
RNWSILGWGTISNAESKDSVATRSNSSISEAAVGFDFLMYSDAFQLIPEVIAVMPFEEVNPASDTVLNSEGVFEVRSRLI
AQKDFGTLRGYGWLGFNYRGSGRSFLMPWGVGAQMKLQRLRLGAELFGYQSVSDDTTDVTEALRTSYINSVNAGSMKFYS
VKPNLMDSQLYATWLISPKLSVQANGGMTLTGSNSAAGFHVGGFIRYSFDMSEGYSEPDYVPPVENPVPNYRSNMYEESD
LSSEKKVRRFKEQTSDGVDQNLFKPRPTAPKKRPRVDDELQQQLDDTEFQIELKSNKKKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42815; Mature: 42684

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNLPRWACVALSIFSISLPALAVDNYKEFRRDHWDFEVNANYFYSEANYPASGGGSQS
CCCCCCHHHHHHHHHHHHCCCHHHHHCHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCC
LVSGNSYSLIDTSFGTRYVPKRNWSILGWGTISNAESKDSVATRSNSSISEAAVGFDFLM
EECCCCEEEEECCCCCEECCCCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
YSDAFQLIPEVIAVMPFEEVNPASDTVLNSEGVFEVRSRLIAQKDFGTLRGYGWLGFNYR
HHHHHHHHHHHHHHCCHHHCCCCHHCEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEE
GSGRSFLMPWGVGAQMKLQRLRLGAELFGYQSVSDDTTDVTEALRTSYINSVNAGSMKFY
CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
SVKPNLMDSQLYATWLISPKLSVQANGGMTLTGSNSAAGFHVGGFIRYSFDMSEGYSEPD
EECCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEECEEEEEEEEHHCCCCCCC
YVPPVENPVPNYRSNMYEESDLSSEKKVRRFKEQTSDGVDQNLFKPRPTAPKKRPRVDDE
CCCCCCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHH
LQQQLDDTEFQIELKSNKKKRR
HHHHCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
ANNLPRWACVALSIFSISLPALAVDNYKEFRRDHWDFEVNANYFYSEANYPASGGGSQS
CCCCCHHHHHHHHHHHHCCCHHHHHCHHHHHHCCCCEEECCCEEEECCCCCCCCCCCCC
LVSGNSYSLIDTSFGTRYVPKRNWSILGWGTISNAESKDSVATRSNSSISEAAVGFDFLM
EECCCCEEEEECCCCCEECCCCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH
YSDAFQLIPEVIAVMPFEEVNPASDTVLNSEGVFEVRSRLIAQKDFGTLRGYGWLGFNYR
HHHHHHHHHHHHHHCCHHHCCCCHHCEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEE
GSGRSFLMPWGVGAQMKLQRLRLGAELFGYQSVSDDTTDVTEALRTSYINSVNAGSMKFY
CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
SVKPNLMDSQLYATWLISPKLSVQANGGMTLTGSNSAAGFHVGGFIRYSFDMSEGYSEPD
EECCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEECEEEEEEEEHHCCCCCCC
YVPPVENPVPNYRSNMYEESDLSSEKKVRRFKEQTSDGVDQNLFKPRPTAPKKRPRVDDE
CCCCCCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHH
LQQQLDDTEFQIELKSNKKKRR
HHHHCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA