| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522065
Identifier: 42522065
GI number: 42522065
Start: 427851
End: 428417
Strand: Direct
Name: 42522065
Synonym: Bd0457
Alternate gene names: NA
Gene position: 427851-428417 (Clockwise)
Preceding gene: 42522064
Following gene: 42522070
Centisome position: 11.31
GC content: 57.67
Gene sequence:
>567_bases ATGGAAAGAAACCGCTGGAGACAGGATGACTCCCGCCGTCGCGATCGTGACAGGGAGCCGGACTACAGTGAATTCATTGA CGAGTACGAACAGCGTTTTCAAGCGCCCCCCGTGCCCGAGGAACGGCAGCGCTACCGCCGTGAAAGCCGGCCACCTGACG ACTATGTCGACTATCGGGAGCGCAGTCCGCGCCCACATCCGGACTATGATGAGCGTCCGCGCCGACTGCGACGCAGAGAC AATGAGGATAATCTGGATTTCGAAATGAATCGGGATTATGAGCGCGGCACCGAGATGGACTATCGCGATTATGAACCTCA TCGAGAAAGATATCCCGATGAACGGGCTTATGGTCAGTCAGATTGGACGCCGCGGGATTCCTACGAAGCCGAACGCATCC GCAACGGCTATCGCAATTCCTATGAGGCGCGCCATCCTGAGCTGGATCGCCATTATGACCGGCACTTTGACTATCGCTAT GGCAGTGATGATATTGATTTCGACAGCCGGGAAGAGCGGCCTTTGCGGCGCCCTCGCCGTCGCCCACGGCATCGCTCGGG TTACTGA
Upstream 100 bases:
>100_bases GATGCATGAAGGGCTCTTTGCTTTGGCAAAGGGCCTTTTGCTTTCTTGAGGGTGACAATGCTGGATTCTAAGATGAGTTG TCACACCCAAGGAGGTTTTC
Downstream 100 bases:
>100_bases TTTTGAAATAAAAAAAGCCTCCGTGATTTGCACCACGGAGGCTTTTGATTCTTCATCTTACTGGAAGCGGGTCAAAGCAT CACGCAATGAATCCAGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRERSPRPHPDYDERPRRLRRRD NEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQSDWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRY GSDDIDFDSREERPLRRPRRRPRHRSGY
Sequences:
>Translated_188_residues MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRERSPRPHPDYDERPRRLRRRD NEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQSDWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRY GSDDIDFDSREERPLRRPRRRPRHRSGY >Mature_188_residues MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRERSPRPHPDYDERPRRLRRRD NEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQSDWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRY GSDDIDFDSREERPLRRPRRRPRHRSGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24151; Mature: 24151
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRE CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH RSPRPHPDYDERPRRLRRRDNEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQS CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCHHHCCCC DWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRYGSDDIDFDSREERPLRRPRR CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH RPRHRSGY CCCCCCCC >Mature Secondary Structure MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRE CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH RSPRPHPDYDERPRRLRRRDNEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQS CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCHHHCCCC DWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRYGSDDIDFDSREERPLRRPRR CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH RPRHRSGY CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA