Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522065

Identifier: 42522065

GI number: 42522065

Start: 427851

End: 428417

Strand: Direct

Name: 42522065

Synonym: Bd0457

Alternate gene names: NA

Gene position: 427851-428417 (Clockwise)

Preceding gene: 42522064

Following gene: 42522070

Centisome position: 11.31

GC content: 57.67

Gene sequence:

>567_bases
ATGGAAAGAAACCGCTGGAGACAGGATGACTCCCGCCGTCGCGATCGTGACAGGGAGCCGGACTACAGTGAATTCATTGA
CGAGTACGAACAGCGTTTTCAAGCGCCCCCCGTGCCCGAGGAACGGCAGCGCTACCGCCGTGAAAGCCGGCCACCTGACG
ACTATGTCGACTATCGGGAGCGCAGTCCGCGCCCACATCCGGACTATGATGAGCGTCCGCGCCGACTGCGACGCAGAGAC
AATGAGGATAATCTGGATTTCGAAATGAATCGGGATTATGAGCGCGGCACCGAGATGGACTATCGCGATTATGAACCTCA
TCGAGAAAGATATCCCGATGAACGGGCTTATGGTCAGTCAGATTGGACGCCGCGGGATTCCTACGAAGCCGAACGCATCC
GCAACGGCTATCGCAATTCCTATGAGGCGCGCCATCCTGAGCTGGATCGCCATTATGACCGGCACTTTGACTATCGCTAT
GGCAGTGATGATATTGATTTCGACAGCCGGGAAGAGCGGCCTTTGCGGCGCCCTCGCCGTCGCCCACGGCATCGCTCGGG
TTACTGA

Upstream 100 bases:

>100_bases
GATGCATGAAGGGCTCTTTGCTTTGGCAAAGGGCCTTTTGCTTTCTTGAGGGTGACAATGCTGGATTCTAAGATGAGTTG
TCACACCCAAGGAGGTTTTC

Downstream 100 bases:

>100_bases
TTTTGAAATAAAAAAAGCCTCCGTGATTTGCACCACGGAGGCTTTTGATTCTTCATCTTACTGGAAGCGGGTCAAAGCAT
CACGCAATGAATCCAGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRERSPRPHPDYDERPRRLRRRD
NEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQSDWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRY
GSDDIDFDSREERPLRRPRRRPRHRSGY

Sequences:

>Translated_188_residues
MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRERSPRPHPDYDERPRRLRRRD
NEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQSDWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRY
GSDDIDFDSREERPLRRPRRRPRHRSGY
>Mature_188_residues
MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRERSPRPHPDYDERPRRLRRRD
NEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQSDWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRY
GSDDIDFDSREERPLRRPRRRPRHRSGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24151; Mature: 24151

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRE
CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
RSPRPHPDYDERPRRLRRRDNEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCHHHCCCC
DWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRYGSDDIDFDSREERPLRRPRR
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
RPRHRSGY
CCCCCCCC
>Mature Secondary Structure
MERNRWRQDDSRRRDRDREPDYSEFIDEYEQRFQAPPVPEERQRYRRESRPPDDYVDYRE
CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
RSPRPHPDYDERPRRLRRRDNEDNLDFEMNRDYERGTEMDYRDYEPHRERYPDERAYGQS
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHCCCHHHCCCC
DWTPRDSYEAERIRNGYRNSYEARHPELDRHYDRHFDYRYGSDDIDFDSREERPLRRPRR
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
RPRHRSGY
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA