Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522040

Identifier: 42522040

GI number: 42522040

Start: 405347

End: 406408

Strand: Direct

Name: 42522040

Synonym: Bd0427

Alternate gene names: NA

Gene position: 405347-406408 (Clockwise)

Preceding gene: 42522025

Following gene: 42522041

Centisome position: 10.72

GC content: 44.54

Gene sequence:

>1062_bases
ATGAAAAAGATTTTGGTAGTAGCAGCTTTGACTATGGCAGCAGCTCCAGCAGCAATGGCTTCTAAAGCACGTGTAGAGGC
TTTGGCTAACTCACGTCACGTTTTGGATTTCCAAACTGCGTTCGACAGACCTTACCAATTCATGGCGCTTTCTGAACAAG
CGACTATCGAATGGGGTAACACTGGTGATGCAAATCCACACGCTGAAGGTGGTTTCGTAAAACGTCACGGTGACGACTCT
GCATTCGGTGCTTACTTCGGTCGTCGTTCTGCTGACTTCTCTGAAGCAGTTCAGACTGTTCGTGATGCCAATCCAGCTTT
CGCTGATCTTATGTTCGAACAAAACGGTTTGAACTTGTTCTACGCTTCCAAAATGGGCGAATGGACTTGGGGTGTGACTG
CGAAATACTCTAACGGTAAAAACGAAGATCCAACTGTAGGAACTAAAGCTACTTCTGCTGGTGTTGCAGTTGCGGCTTCC
AACGGAACTTGGGACTTCGAATTGGTTCAAGGTTTCACAGGTAAATCTGAATTGGACAACGGTACTGTTACAGCTGAAGT
TGAGTCTAAAGGTTTGACTAACGTAACTGTTGGTTACCACATGTCTCCAGAAATGGAAGTTTACGGTAACGTAAAAATGT
CTAAAGTTGAAGCAGACCTAAACGGTACTCCAATTGAAGTTGAAACTACTTCTTACAAAGTGGGTATGGTTAATACTCTT
GCTAAGTCTGAAGAAGGCAACTTCTTCTACGGTGTAGAAGTAGCTTCTACTAAAGTAAAAGACGACTCTGAGTCCCTGTT
GCTTCCAGTTTACATGGGCGTAGAGCACAATGCGGCTTCTTGGTTGGTTCTTCGTGCATCCGTTGCTCAAAACGTGATCT
TGAACGAAACTAAAGACGATGCAACTGGCAACAAAACTGACGAAGATTCCACTAGAATGGCTGCTGGCGCGGGTATCAAA
TTCGGTAAATCCGTTATTGATGCTTCCTTCGCGGGTTCCACTACTGGTGTTATCAACGCCAACAACTTGTTCTCTCAAGT
TGCTTACACTTACACTTTCTAA

Upstream 100 bases:

>100_bases
TCTTGGACCTGGTCCTCATTAGCATTTTTTGTGTAAACGATTAAAGCTTTTAATGGATTTAAAAGTTCATAAGATTGCAA
CGAAACGAAAGGATGCAACA

Downstream 100 bases:

>100_bases
GACCTAGTCTTAAAGTTTAAGAACTCAAAGCCCAGGTAACCCCTGGGCTTTTTGTTTTTGGGGAATCGAAGTTTCCGTCT
TTTTCGCTCCCATAGCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKKILVVAALTMAAAPAAMASKARVEALANSRHVLDFQTAFDRPYQFMALSEQATIEWGNTGDANPHAEGGFVKRHGDDS
AFGAYFGRRSADFSEAVQTVRDANPAFADLMFEQNGLNLFYASKMGEWTWGVTAKYSNGKNEDPTVGTKATSAGVAVAAS
NGTWDFELVQGFTGKSELDNGTVTAEVESKGLTNVTVGYHMSPEMEVYGNVKMSKVEADLNGTPIEVETTSYKVGMVNTL
AKSEEGNFFYGVEVASTKVKDDSESLLLPVYMGVEHNAASWLVLRASVAQNVILNETKDDATGNKTDEDSTRMAAGAGIK
FGKSVIDASFAGSTTGVINANNLFSQVAYTYTF

Sequences:

>Translated_353_residues
MKKILVVAALTMAAAPAAMASKARVEALANSRHVLDFQTAFDRPYQFMALSEQATIEWGNTGDANPHAEGGFVKRHGDDS
AFGAYFGRRSADFSEAVQTVRDANPAFADLMFEQNGLNLFYASKMGEWTWGVTAKYSNGKNEDPTVGTKATSAGVAVAAS
NGTWDFELVQGFTGKSELDNGTVTAEVESKGLTNVTVGYHMSPEMEVYGNVKMSKVEADLNGTPIEVETTSYKVGMVNTL
AKSEEGNFFYGVEVASTKVKDDSESLLLPVYMGVEHNAASWLVLRASVAQNVILNETKDDATGNKTDEDSTRMAAGAGIK
FGKSVIDASFAGSTTGVINANNLFSQVAYTYTF
>Mature_353_residues
MKKILVVAALTMAAAPAAMASKARVEALANSRHVLDFQTAFDRPYQFMALSEQATIEWGNTGDANPHAEGGFVKRHGDDS
AFGAYFGRRSADFSEAVQTVRDANPAFADLMFEQNGLNLFYASKMGEWTWGVTAKYSNGKNEDPTVGTKATSAGVAVAAS
NGTWDFELVQGFTGKSELDNGTVTAEVESKGLTNVTVGYHMSPEMEVYGNVKMSKVEADLNGTPIEVETTSYKVGMVNTL
AKSEEGNFFYGVEVASTKVKDDSESLLLPVYMGVEHNAASWLVLRASVAQNVILNETKDDATGNKTDEDSTRMAAGAGIK
FGKSVIDASFAGSTTGVINANNLFSQVAYTYTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37781; Mature: 37781

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVVAALTMAAAPAAMASKARVEALANSRHVLDFQTAFDRPYQFMALSEQATIEWGN
CCEEEEEEHHHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCEEEEEECCCEEEEECC
TGDANPHAEGGFVKRHGDDSAFGAYFGRRSADFSEAVQTVRDANPAFADLMFEQNGLNLF
CCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEE
YASKMGEWTWGVTAKYSNGKNEDPTVGTKATSAGVAVAASNGTWDFELVQGFTGKSELDN
EECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEHEECCCCCCCCCCC
GTVTAEVESKGLTNVTVGYHMSPEMEVYGNVKMSKVEADLNGTPIEVETTSYKVGMVNTL
CEEEEEECCCCCEEEEEEEECCCCEEEECCEEEEEEEECCCCCCEEEEECEEEEEEHHHH
AKSEEGNFFYGVEVASTKVKDDSESLLLPVYMGVEHNAASWLVLRASVAQNVILNETKDD
HCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEHHHCCCEEECCCCC
ATGNKTDEDSTRMAAGAGIKFGKSVIDASFAGSTTGVINANNLFSQVAYTYTF
CCCCCCCCCHHHHHHCCCCHHCHHHHHHHCCCCCCEEEECHHHHHHHEEEECC
>Mature Secondary Structure
MKKILVVAALTMAAAPAAMASKARVEALANSRHVLDFQTAFDRPYQFMALSEQATIEWGN
CCEEEEEEHHHHHHCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCEEEEEECCCEEEEECC
TGDANPHAEGGFVKRHGDDSAFGAYFGRRSADFSEAVQTVRDANPAFADLMFEQNGLNLF
CCCCCCCCCCCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEEE
YASKMGEWTWGVTAKYSNGKNEDPTVGTKATSAGVAVAASNGTWDFELVQGFTGKSELDN
EECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEHEECCCCCCCCCCC
GTVTAEVESKGLTNVTVGYHMSPEMEVYGNVKMSKVEADLNGTPIEVETTSYKVGMVNTL
CEEEEEECCCCCEEEEEEEECCCCEEEECCEEEEEEEECCCCCCEEEEECEEEEEEHHHH
AKSEEGNFFYGVEVASTKVKDDSESLLLPVYMGVEHNAASWLVLRASVAQNVILNETKDD
HCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEEHHHCCCEEECCCCC
ATGNKTDEDSTRMAAGAGIKFGKSVIDASFAGSTTGVINANNLFSQVAYTYTF
CCCCCCCCCHHHHHHCCCCHHCHHHHHHHCCCCCCEEEECHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA