Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522025

Identifier: 42522025

GI number: 42522025

Start: 386969

End: 388240

Strand: Direct

Name: 42522025

Synonym: Bd0411

Alternate gene names: NA

Gene position: 386969-388240 (Clockwise)

Preceding gene: 42522024

Following gene: 42522040

Centisome position: 10.23

GC content: 51.73

Gene sequence:

>1272_bases
TTGTTCCCGTCGCTGCCCGCGATCATTTGCATTTTCAACGCGTTTTCATTTAGCCATTTCCAACCCCGGCCAGAGCGAAT
ATTGTTGAATCAAAAGCCTCTCCAAGGAACAACCAATCCTATGAAACTGCTAATGATTCTTCTGACCAGCATGGCTGTGC
ACGCTCAAGCGGCGTGGGACTTGAACGATGTCACTTATCTGATGCCTTTGCCACAATCCGTGGACGGGGATTCGTTGTTA
AAACTCGAAAGTCCGGGCCGCGGGGGCGCTTTGCTGCCAGTATCCATGGTGAATCAGCTGCCGGTTTTGGCCATTGATCG
CACTCGTCCCGAAGTGAACAGCACTCTTCGTGTGATGGCCGTTCGTATTGATCCGTGTTTCCCGCTTCCGACCCCTCAAT
CCTGTCAACGTCAGATCCGTCTTGCGTGGCAGCCGATTGAATTGAACCGCCGCAATGAGGTTGAAACCGTCGATGCAGCT
TTGCACAGCTTCTATGTTCTGCAGGACTGGGAGTTTGCAAATCTTCTGAAAGAGATCAGCGCCTGGAAATCCAAATATTC
TGTGAATACCAAGTACCTGCCTTTGCAGGTTCATCCGGCGTGGGCGACGGAAAAAGATGCTTCTCCGGCTCTGGCGGAGT
TTCAAAAGATCATTTTGAAGTATGCCGGGATCGAGAACTTCAGCCGGGTGACAGCGATGGTTTTGCGGGGCAATGGGGAC
ATGTGGGCTTTTGCCGGTTTTGAACCGCGCGGTGGTAAATTGGAACTTTTGCCGATTCCTCGTCTGAACCGTCTGTCCCA
GTCCTTTATCAACATGGCGGTACCGGCAGATCACTTCAGCGGTGGCGGGATTTCTCCGATTCCAAAAGGGGATGACACCT
TCAATAATCTGGCGGCGGAATCCATCCGTATGGGTGAAGGCACTGAAGACACCATCCGCGAGGAAGTTCGCGCCGCATTC
CGTATCGAGAATCCCAAGTTCTTCAATCCGGAAAACATGGACTGCGTCAGCTGTCATGTGGCCCAGCCAGCGATTCACTG
GGTGCTGAACAAACGCCCGGAACTGCAGGTTGAAAAGCTGTGGAGCCAGGAAATTTACGGCAATCCTAAGTATAATCTGA
AAAACACGAGTGTAGAGATTTGGAATACCCAGCAGATTCGTGCGTTGGGTTATTTCGGGAAGAACGTGGCGATCAGCCAG
CGCGTGATCAATGAGTCCGCCGAAGTGGCGGACTTCATCAACAGAATTACTGCGCCAAAGTCAGAGGAATAA

Upstream 100 bases:

>100_bases
TCAGGCGAACCAGTCACAACAATTGGCTTTGAAGCTTTTGGGCTAAGGCTGAATGACAACCAAAACCAAAAAGCGGCTTC
CCTCGGGAGGCCGCTTTTTT

Downstream 100 bases:

>100_bases
GGTCGACTGCGAAGCGGGCCTTGTCCTGGTACTTGTACTCGATATCACCCGGAAGCAACACAGAGTTGTTCTCCGGATCG
TAAGTCCAGCCACCGTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MFPSLPAIICIFNAFSFSHFQPRPERILLNQKPLQGTTNPMKLLMILLTSMAVHAQAAWDLNDVTYLMPLPQSVDGDSLL
KLESPGRGGALLPVSMVNQLPVLAIDRTRPEVNSTLRVMAVRIDPCFPLPTPQSCQRQIRLAWQPIELNRRNEVETVDAA
LHSFYVLQDWEFANLLKEISAWKSKYSVNTKYLPLQVHPAWATEKDASPALAEFQKIILKYAGIENFSRVTAMVLRGNGD
MWAFAGFEPRGGKLELLPIPRLNRLSQSFINMAVPADHFSGGGISPIPKGDDTFNNLAAESIRMGEGTEDTIREEVRAAF
RIENPKFFNPENMDCVSCHVAQPAIHWVLNKRPELQVEKLWSQEIYGNPKYNLKNTSVEIWNTQQIRALGYFGKNVAISQ
RVINESAEVADFINRITAPKSEE

Sequences:

>Translated_423_residues
MFPSLPAIICIFNAFSFSHFQPRPERILLNQKPLQGTTNPMKLLMILLTSMAVHAQAAWDLNDVTYLMPLPQSVDGDSLL
KLESPGRGGALLPVSMVNQLPVLAIDRTRPEVNSTLRVMAVRIDPCFPLPTPQSCQRQIRLAWQPIELNRRNEVETVDAA
LHSFYVLQDWEFANLLKEISAWKSKYSVNTKYLPLQVHPAWATEKDASPALAEFQKIILKYAGIENFSRVTAMVLRGNGD
MWAFAGFEPRGGKLELLPIPRLNRLSQSFINMAVPADHFSGGGISPIPKGDDTFNNLAAESIRMGEGTEDTIREEVRAAF
RIENPKFFNPENMDCVSCHVAQPAIHWVLNKRPELQVEKLWSQEIYGNPKYNLKNTSVEIWNTQQIRALGYFGKNVAISQ
RVINESAEVADFINRITAPKSEE
>Mature_423_residues
MFPSLPAIICIFNAFSFSHFQPRPERILLNQKPLQGTTNPMKLLMILLTSMAVHAQAAWDLNDVTYLMPLPQSVDGDSLL
KLESPGRGGALLPVSMVNQLPVLAIDRTRPEVNSTLRVMAVRIDPCFPLPTPQSCQRQIRLAWQPIELNRRNEVETVDAA
LHSFYVLQDWEFANLLKEISAWKSKYSVNTKYLPLQVHPAWATEKDASPALAEFQKIILKYAGIENFSRVTAMVLRGNGD
MWAFAGFEPRGGKLELLPIPRLNRLSQSFINMAVPADHFSGGGISPIPKGDDTFNNLAAESIRMGEGTEDTIREEVRAAF
RIENPKFFNPENMDCVSCHVAQPAIHWVLNKRPELQVEKLWSQEIYGNPKYNLKNTSVEIWNTQQIRALGYFGKNVAISQ
RVINESAEVADFINRITAPKSEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47653; Mature: 47653

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPSLPAIICIFNAFSFSHFQPRPERILLNQKPLQGTTNPMKLLMILLTSMAVHAQAAWD
CCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
LNDVTYLMPLPQSVDGDSLLKLESPGRGGALLPVSMVNQLPVLAIDRTRPEVNSTLRVMA
CCCEEEEEECCCCCCCCCEEEECCCCCCCEEEHHHHHCCCCEEEEECCCCCCCCCEEEEE
VRIDPCFPLPTPQSCQRQIRLAWQPIELNRRNEVETVDAALHSFYVLQDWEFANLLKEIS
EEECCCCCCCCCHHHHHHHHEEECEEECCCCCCHHHHHHHHHHEEEEECCHHHHHHHHHH
AWKSKYSVNTKYLPLQVHPAWATEKDASPALAEFQKIILKYAGIENFSRVTAMVLRGNGD
HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCC
MWAFAGFEPRGGKLELLPIPRLNRLSQSFINMAVPADHFSGGGISPIPKGDDTFNNLAAE
EEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SIRMGEGTEDTIREEVRAAFRIENPKFFNPENMDCVSCHVAQPAIHWVLNKRPELQVEKL
HHCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHH
WSQEIYGNPKYNLKNTSVEIWNTQQIRALGYFGKNVAISQRVINESAEVADFINRITAPK
HHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCC
SEE
CCC
>Mature Secondary Structure
MFPSLPAIICIFNAFSFSHFQPRPERILLNQKPLQGTTNPMKLLMILLTSMAVHAQAAWD
CCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
LNDVTYLMPLPQSVDGDSLLKLESPGRGGALLPVSMVNQLPVLAIDRTRPEVNSTLRVMA
CCCEEEEEECCCCCCCCCEEEECCCCCCCEEEHHHHHCCCCEEEEECCCCCCCCCEEEEE
VRIDPCFPLPTPQSCQRQIRLAWQPIELNRRNEVETVDAALHSFYVLQDWEFANLLKEIS
EEECCCCCCCCCHHHHHHHHEEECEEECCCCCCHHHHHHHHHHEEEEECCHHHHHHHHHH
AWKSKYSVNTKYLPLQVHPAWATEKDASPALAEFQKIILKYAGIENFSRVTAMVLRGNGD
HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCC
MWAFAGFEPRGGKLELLPIPRLNRLSQSFINMAVPADHFSGGGISPIPKGDDTFNNLAAE
EEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
SIRMGEGTEDTIREEVRAAFRIENPKFFNPENMDCVSCHVAQPAIHWVLNKRPELQVEKL
HHCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHH
WSQEIYGNPKYNLKNTSVEIWNTQQIRALGYFGKNVAISQRVINESAEVADFINRITAPK
HHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCC
SEE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA