Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522017

Identifier: 42522017

GI number: 42522017

Start: 380108

End: 380656

Strand: Direct

Name: 42522017

Synonym: Bd0403

Alternate gene names: NA

Gene position: 380108-380656 (Clockwise)

Preceding gene: 42522014

Following gene: 42522018

Centisome position: 10.05

GC content: 48.63

Gene sequence:

>549_bases
ATGAGACTTCTGGTTTCTTGCCTTCTAATAATGATGAGTTTTTCAGGTGCCTGCTGGGCCAAGGTGGACTTGCGTACCAC
GAAGCCCCTGGTGATTCCTGAGGATAAAGTCACACCTAAGATCACCAAAGAAGACGTCGCGAAAATCATTCCTTTGGACA
TTCAAAGCAACGAAAGCACGGGTTCTGTGATGAGCCGTATTGCTGATCGTGGCTTCAATATGTGGTTCAACTCTCCGATC
ATTAAAAACAGCCTTCTGGGTCGTGCTGTGGAAGAAACCCAGGAAAAACTGAAAACGGACGTGGTGGTGCCGGCGGCAAC
TCCGCGCGGAGTCAGTCATAAGTTCTCTTTCCGTGTTGAAGCCTTCCAGGCTTTGGCGAAGGTGGAATATTCCGGCTGGG
TGAAGGCTGCGGTCAATTATGATGCAAAAGCTTCGGCAACCGATATTCAGTTCAAAGACAAAGTCATGAACAACAAAGAT
CTGGTTGTCAGTCACAAAGCCAACAAAGAACAGGGCCTGTCGATGATTGGCCTTGCCTGGTCCTGGTAA

Upstream 100 bases:

>100_bases
GTCTTACATCCCGCTGTACCGCTGTTATTTGCTCATTATCTCCGCTTTAAAGGGACTGGAGCCACTTTGGGTGGAATGCT
CTTTGAATATGGAGGTATGT

Downstream 100 bases:

>100_bases
GCGTCCTACCCTTAGGACATGGAAAAAATCGTATTTATCTCTGGAAAAAGAACTCCCTTCGGAGCCTTCGGCGGTTCATT
GAAGGATGTATCAGCAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRLLVSCLLIMMSFSGACWAKVDLRTTKPLVIPEDKVTPKITKEDVAKIIPLDIQSNESTGSVMSRIADRGFNMWFNSPI
IKNSLLGRAVEETQEKLKTDVVVPAATPRGVSHKFSFRVEAFQALAKVEYSGWVKAAVNYDAKASATDIQFKDKVMNNKD
LVVSHKANKEQGLSMIGLAWSW

Sequences:

>Translated_182_residues
MRLLVSCLLIMMSFSGACWAKVDLRTTKPLVIPEDKVTPKITKEDVAKIIPLDIQSNESTGSVMSRIADRGFNMWFNSPI
IKNSLLGRAVEETQEKLKTDVVVPAATPRGVSHKFSFRVEAFQALAKVEYSGWVKAAVNYDAKASATDIQFKDKVMNNKD
LVVSHKANKEQGLSMIGLAWSW
>Mature_182_residues
MRLLVSCLLIMMSFSGACWAKVDLRTTKPLVIPEDKVTPKITKEDVAKIIPLDIQSNESTGSVMSRIADRGFNMWFNSPI
IKNSLLGRAVEETQEKLKTDVVVPAATPRGVSHKFSFRVEAFQALAKVEYSGWVKAAVNYDAKASATDIQFKDKVMNNKD
LVVSHKANKEQGLSMIGLAWSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20233; Mature: 20233

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLVSCLLIMMSFSGACWAKVDLRTTKPLVIPEDKVTPKITKEDVAKIIPLDIQSNEST
CHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHHEECCCCCCCCCH
GSVMSRIADRGFNMWFNSPIIKNSLLGRAVEETQEKLKTDVVVPAATPRGVSHKFSFRVE
HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHH
AFQALAKVEYSGWVKAAVNYDAKASATDIQFKDKVMNNKDLVVSHKANKEQGLSMIGLAW
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHCCEEEEEEE
SW
CC
>Mature Secondary Structure
MRLLVSCLLIMMSFSGACWAKVDLRTTKPLVIPEDKVTPKITKEDVAKIIPLDIQSNEST
CHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCHHHHHHEECCCCCCCCCH
GSVMSRIADRGFNMWFNSPIIKNSLLGRAVEETQEKLKTDVVVPAATPRGVSHKFSFRVE
HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHH
AFQALAKVEYSGWVKAAVNYDAKASATDIQFKDKVMNNKDLVVSHKANKEQGLSMIGLAW
HHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCHHHCCEEEEEEE
SW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA