| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522014
Identifier: 42522014
GI number: 42522014
Start: 376934
End: 377530
Strand: Direct
Name: 42522014
Synonym: Bd0400
Alternate gene names: NA
Gene position: 376934-377530 (Clockwise)
Preceding gene: 42522012
Following gene: 42522017
Centisome position: 9.96
GC content: 51.93
Gene sequence:
>597_bases ATGAAGGTTCTGTCTTTTGTCTTGGCATTGCTTTCTGCAACCCCTGTTTGGGCGGCGTTGCCTCCGCAGTTTTCGGAGTG TTTGCAGCAGAATTCGGGTTCGAATATGACGGCGGCGGATGTGGCCGAGATCGCGAAGGTGTCGCGTATCACTTATTGCC AGAACCAGGTCAGTTTGATTGGCAAGGCAGAGCTGCTTTCCATGCTTTCCAATCCCAATGTGAACATGGGGCTTTCGGTC AGTAAAACCAGTTATACCAATCAGGATTTTATCGATATGGCGGCGGCAGGCACTTATGTGCTTTATGTCGATAGCAGTCG TCTTTCCCGTGACAATTTGGTGGCTCTGCTAAATGCCAATGTTCAGTTGGTGGTGATGTCGGGAAGCTCGGGGTTGTCCC GCGCGGATCTTTTGATTCTGGCGGCGACTAAGCCGTTTATTTACAACGTGAACTCGGTGGTGTTGAAGACAGACTTGCAG GATTACGTTCGCGCCGGGGTGCAGGTGGTGATTCGCACGGCTCAGGCGGGTCTTAGTCGTCAGGACATTCTGGATGTGGC GCAGTTGAATTCGGAGCGTGTGTCCATCTTCCCTTAA
Upstream 100 bases:
>100_bases ACCTTTTTGAACGGTTCCTTGTTCTTGGTTTTGGCAAATATCATGGAAAATCTTTGAGTATAATTTTTTGTAGGCACTAC ACTTTAAGGGTGAGGTGTTT
Downstream 100 bases:
>100_bases AAAAGAAAAGGGTCTCTTTTCAGAGACCCTTCACTTGGCATTAATTTAAGAAACTCTTACTACTGATTCATGACGGAAAC AGCTGGCATTGGGCACTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLIGKAELLSMLSNPNVNMGLSV SKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNANVQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQ DYVRAGVQVVIRTAQAGLSRQDILDVAQLNSERVSIFP
Sequences:
>Translated_198_residues MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLIGKAELLSMLSNPNVNMGLSV SKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNANVQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQ DYVRAGVQVVIRTAQAGLSRQDILDVAQLNSERVSIFP >Mature_198_residues MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLIGKAELLSMLSNPNVNMGLSV SKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNANVQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQ DYVRAGVQVVIRTAQAGLSRQDILDVAQLNSERVSIFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21305; Mature: 21305
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLI CHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GKAELLSMLSNPNVNMGLSVSKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNAN HHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCEEEEECCC VQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQDYVRAGVQVVIRTAQAGLSR EEEEEEECCCCCCCCEEEEEEECCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCH QDILDVAQLNSERVSIFP HHHHHHHHCCCCEEEECC >Mature Secondary Structure MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLI CHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH GKAELLSMLSNPNVNMGLSVSKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNAN HHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCEEEEECCC VQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQDYVRAGVQVVIRTAQAGLSR EEEEEEECCCCCCCCEEEEEEECCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCH QDILDVAQLNSERVSIFP HHHHHHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA