Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522014

Identifier: 42522014

GI number: 42522014

Start: 376934

End: 377530

Strand: Direct

Name: 42522014

Synonym: Bd0400

Alternate gene names: NA

Gene position: 376934-377530 (Clockwise)

Preceding gene: 42522012

Following gene: 42522017

Centisome position: 9.96

GC content: 51.93

Gene sequence:

>597_bases
ATGAAGGTTCTGTCTTTTGTCTTGGCATTGCTTTCTGCAACCCCTGTTTGGGCGGCGTTGCCTCCGCAGTTTTCGGAGTG
TTTGCAGCAGAATTCGGGTTCGAATATGACGGCGGCGGATGTGGCCGAGATCGCGAAGGTGTCGCGTATCACTTATTGCC
AGAACCAGGTCAGTTTGATTGGCAAGGCAGAGCTGCTTTCCATGCTTTCCAATCCCAATGTGAACATGGGGCTTTCGGTC
AGTAAAACCAGTTATACCAATCAGGATTTTATCGATATGGCGGCGGCAGGCACTTATGTGCTTTATGTCGATAGCAGTCG
TCTTTCCCGTGACAATTTGGTGGCTCTGCTAAATGCCAATGTTCAGTTGGTGGTGATGTCGGGAAGCTCGGGGTTGTCCC
GCGCGGATCTTTTGATTCTGGCGGCGACTAAGCCGTTTATTTACAACGTGAACTCGGTGGTGTTGAAGACAGACTTGCAG
GATTACGTTCGCGCCGGGGTGCAGGTGGTGATTCGCACGGCTCAGGCGGGTCTTAGTCGTCAGGACATTCTGGATGTGGC
GCAGTTGAATTCGGAGCGTGTGTCCATCTTCCCTTAA

Upstream 100 bases:

>100_bases
ACCTTTTTGAACGGTTCCTTGTTCTTGGTTTTGGCAAATATCATGGAAAATCTTTGAGTATAATTTTTTGTAGGCACTAC
ACTTTAAGGGTGAGGTGTTT

Downstream 100 bases:

>100_bases
AAAAGAAAAGGGTCTCTTTTCAGAGACCCTTCACTTGGCATTAATTTAAGAAACTCTTACTACTGATTCATGACGGAAAC
AGCTGGCATTGGGCACTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLIGKAELLSMLSNPNVNMGLSV
SKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNANVQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQ
DYVRAGVQVVIRTAQAGLSRQDILDVAQLNSERVSIFP

Sequences:

>Translated_198_residues
MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLIGKAELLSMLSNPNVNMGLSV
SKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNANVQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQ
DYVRAGVQVVIRTAQAGLSRQDILDVAQLNSERVSIFP
>Mature_198_residues
MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLIGKAELLSMLSNPNVNMGLSV
SKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNANVQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQ
DYVRAGVQVVIRTAQAGLSRQDILDVAQLNSERVSIFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21305; Mature: 21305

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLI
CHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GKAELLSMLSNPNVNMGLSVSKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNAN
HHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCEEEEECCC
VQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQDYVRAGVQVVIRTAQAGLSR
EEEEEEECCCCCCCCEEEEEEECCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCH
QDILDVAQLNSERVSIFP
HHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MKVLSFVLALLSATPVWAALPPQFSECLQQNSGSNMTAADVAEIAKVSRITYCQNQVSLI
CHHHHHHHHHHCCCCCCEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GKAELLSMLSNPNVNMGLSVSKTSYTNQDFIDMAAAGTYVLYVDSSRLSRDNLVALLNAN
HHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCEEEEECCC
VQLVVMSGSSGLSRADLLILAATKPFIYNVNSVVLKTDLQDYVRAGVQVVIRTAQAGLSR
EEEEEEECCCCCCCCEEEEEEECCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCH
QDILDVAQLNSERVSIFP
HHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA