Click here to switch to the map view.

The map label for this gene is yiiP [C]

Identifier: 42521983

GI number: 42521983

Start: 345768

End: 346805

Strand: Direct

Name: yiiP [C]

Synonym: Bd0368

Alternate gene names: 42521983

Gene position: 345768-346805 (Clockwise)

Preceding gene: 42521982

Following gene: 42521984

Centisome position: 9.14

GC content: 53.76

Gene sequence:

>1038_bases
ATGCAAAATGCTGTGTCTTCTTCTGACAAGATCCGTAATCGTGCCGCCTGGGTTTCCGCCATCGCCAGTGTTCTGATATT
TGCGATGAAGGTTTTTGCCTATCGTCTGACGGGCTCGACGGCGGTTTTATCAGACGCCCTCGAGAGTATTGTGAATGTGA
TAGCAGCTATCGTGGCGCTGTTTGTGATTCGTTTTGCCTCGCAGCCTGCGGACGAAAATCACCCTTATGGCCATGGCAAG
GCCGAATATTTTTCTTCTGCTTTTGAAGGTGGGATGATCTTCTTTGCTGCGATCATGATTATCGGCGAAGCGGTCAAGGC
GTTGATCTATCACGAGCCGACCCAGCAGCTTGAGACGGGTTTGCTGATTGTCGGGGGAGCTGCGCTGGTGAACCTGGCTT
TGGGTTTGTACCTCAAGCGCGTGGGCAGGACTCATCAGTCGGATGCACTCAAAGCCAGCGGGGCTCATGTCCTTTCTGAC
GTGCTGACCACAGTCGGCGTGATGGTGGGACTGGGGCTGGTGCTTTTGACGGGAATTCAGTGGCTGGATCCGGTCATCGC
TGTGCTGGTGGGTTTGCAACTGGCTTATGCCGGATTCAAGATTGTTCGCGGGTCTTTGGGGGGGCTTATGGATCAGCAGG
ATCCAGCCTCGCTGGAACAGCTGGCGGAGGCGATGGAGAAAAACCGCGTTCCTGGAGTGATTAACATTCACCATTTACGG
GTGATCCGTTCTGGGCGCTTCCACCACGTGGATGCGCACATGGTGGTGCCGGAATATTGGGATGTTTCTCAGGTTCATGC
CATGACCGGTGATTTTGAGGCGGCGGTGGTAAAGGATTATGAGTTTGACGGGGAGCTGGTGTTTCACCTGGATCCTTGTA
AAAAATCCTACTGTGACAGCTGCCAGGTTCCCCAGTGCCCGATTCGTTTGCAGCCGTTCCGGCAGAAGCCTGACTTCTCT
GTGAAAAGCTTGACCGATGACCCGGCTCCGACTAATCAAGGGACCCATGACAGATCAGGCTCTTCGCAGACAAATTAA

Upstream 100 bases:

>100_bases
CGCCTGTGGTGGAAATCAAATCCGCTGTTCATAAGCGTCGTAAAGCGGCCGGCTAATTATTCGTTGACCTGCCTCGCTCT
ATCTAAGAAAACGCTCCTAT

Downstream 100 bases:

>100_bases
CATCACCAAAGACCTTCCCAACCAGAACGCCTACACCCTGGCGTTGAATGGCGAATATGCACACGTGGCTTTCGATGAAC
TGCGTGCGCCGCTGAACAAG

Product: cation efflux system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MQNAVSSSDKIRNRAAWVSAIASVLIFAMKVFAYRLTGSTAVLSDALESIVNVIAAIVALFVIRFASQPADENHPYGHGK
AEYFSSAFEGGMIFFAAIMIIGEAVKALIYHEPTQQLETGLLIVGGAALVNLALGLYLKRVGRTHQSDALKASGAHVLSD
VLTTVGVMVGLGLVLLTGIQWLDPVIAVLVGLQLAYAGFKIVRGSLGGLMDQQDPASLEQLAEAMEKNRVPGVINIHHLR
VIRSGRFHHVDAHMVVPEYWDVSQVHAMTGDFEAAVVKDYEFDGELVFHLDPCKKSYCDSCQVPQCPIRLQPFRQKPDFS
VKSLTDDPAPTNQGTHDRSGSSQTN

Sequences:

>Translated_345_residues
MQNAVSSSDKIRNRAAWVSAIASVLIFAMKVFAYRLTGSTAVLSDALESIVNVIAAIVALFVIRFASQPADENHPYGHGK
AEYFSSAFEGGMIFFAAIMIIGEAVKALIYHEPTQQLETGLLIVGGAALVNLALGLYLKRVGRTHQSDALKASGAHVLSD
VLTTVGVMVGLGLVLLTGIQWLDPVIAVLVGLQLAYAGFKIVRGSLGGLMDQQDPASLEQLAEAMEKNRVPGVINIHHLR
VIRSGRFHHVDAHMVVPEYWDVSQVHAMTGDFEAAVVKDYEFDGELVFHLDPCKKSYCDSCQVPQCPIRLQPFRQKPDFS
VKSLTDDPAPTNQGTHDRSGSSQTN
>Mature_345_residues
MQNAVSSSDKIRNRAAWVSAIASVLIFAMKVFAYRLTGSTAVLSDALESIVNVIAAIVALFVIRFASQPADENHPYGHGK
AEYFSSAFEGGMIFFAAIMIIGEAVKALIYHEPTQQLETGLLIVGGAALVNLALGLYLKRVGRTHQSDALKASGAHVLSD
VLTTVGVMVGLGLVLLTGIQWLDPVIAVLVGLQLAYAGFKIVRGSLGGLMDQQDPASLEQLAEAMEKNRVPGVINIHHLR
VIRSGRFHHVDAHMVVPEYWDVSQVHAMTGDFEAAVVKDYEFDGELVFHLDPCKKSYCDSCQVPQCPIRLQPFRQKPDFS
VKSLTDDPAPTNQGTHDRSGSSQTN

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=271, Percent_Identity=27.3062730627306, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 37382; Mature: 37382

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNAVSSSDKIRNRAAWVSAIASVLIFAMKVFAYRLTGSTAVLSDALESIVNVIAAIVAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FVIRFASQPADENHPYGHGKAEYFSSAFEGGMIFFAAIMIIGEAVKALIYHEPTQQLETG
HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
LLIVGGAALVNLALGLYLKRVGRTHQSDALKASGAHVLSDVLTTVGVMVGLGLVLLTGIQ
EEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WLDPVIAVLVGLQLAYAGFKIVRGSLGGLMDQQDPASLEQLAEAMEKNRVPGVINIHHLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHH
VIRSGRFHHVDAHMVVPEYWDVSQVHAMTGDFEAAVVKDYEFDGELVFHLDPCKKSYCDS
HHHCCCEEEECCEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCEEEEECHHHHHHCCC
CQVPQCPIRLQPFRQKPDFSVKSLTDDPAPTNQGTHDRSGSSQTN
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQNAVSSSDKIRNRAAWVSAIASVLIFAMKVFAYRLTGSTAVLSDALESIVNVIAAIVAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FVIRFASQPADENHPYGHGKAEYFSSAFEGGMIFFAAIMIIGEAVKALIYHEPTQQLETG
HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
LLIVGGAALVNLALGLYLKRVGRTHQSDALKASGAHVLSDVLTTVGVMVGLGLVLLTGIQ
EEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WLDPVIAVLVGLQLAYAGFKIVRGSLGGLMDQQDPASLEQLAEAMEKNRVPGVINIHHLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHH
VIRSGRFHHVDAHMVVPEYWDVSQVHAMTGDFEAAVVKDYEFDGELVFHLDPCKKSYCDS
HHHCCCEEEECCEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCEEEEECHHHHHHCCC
CQVPQCPIRLQPFRQKPDFSVKSLTDDPAPTNQGTHDRSGSSQTN
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]