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The map label for this gene is 42521908

Identifier: 42521908

GI number: 42521908

Start: 270722

End: 271600

Strand: Direct

Name: 42521908

Synonym: Bd0285

Alternate gene names: NA

Gene position: 270722-271600 (Clockwise)

Preceding gene: 42521907

Following gene: 42521909

Centisome position: 7.16

GC content: 49.37

Gene sequence:

>879_bases
ATGCTTGCCAATGAGCTGGTATTGAAAACAAAGACAATGGGAGCGGTACTGACAACGGCCGTTCTTGTTTTGTTTTCAGC
AAGTGCTCAAGCCTACGACGGCAAGCCGGCTCCGATGGTTGCCAACGAGCAGCCCAAAGAGCTTGAAGGCGTGGGTATCG
ACGAAAAGTTGGGTACTAAAATCGACCTGACTTTGAAAGTGAAAGACGACAACGGCCAGGAAGTGGCGCTGGGGTCTTTC
TTCGACGGTAAACATCCGGTGATCATTTCACCGGTGTATTTTTCCTGTCCGGGTCTTTGTAACTTCCACTTGAACGGTCT
GACCGACGCGCTCAAGTTGATGGATAAAGATTGGACGATTGGTAAGAAGTTTAAATTGCTGTCTGTGAGTTTTGACTCAA
AAGAAACTCCCGACTTGGCGGCAAACAAAAAACAGACTTACATGAAGCTGTATGACCGCGCCGGCTCTGAAAAAGAATGG
CACTTCATCACGGCGGACGAATCCACAGTGCAGGCAATGATGCAGTCACTGGGGTTCAAGTTCAGATGGGACGAGAAAGC
TCAAGAGTGGGCGCACGCCTCTGCGGCGATTGTGATCACTCCGGACGGAACGATCTCGCGCTATCTGCCGGGGATTATGT
TTAATCCTCAGGACATCAAGATCGCTCTGAACGAAGCGACCGATGGTAAAATCGGAACCTTCGTCGACAGCTTGGTGCTT
TATTGTTTTAAGTATGACCCACATCAAAGCAAGTACACGCTTGTTGCCTTCAACGTAATGAAGATGGGCGGAGCGGTGAT
GGTTTTGGTGATGGTAATTTGGTTATTGCCTGTATGGATTCGCGCTCGCAGAGAGCAGAACAATACGGCGGGGAGATAA

Upstream 100 bases:

>100_bases
GATCCATTTCATCGATTCTATCACTGAAAATAAATCTAAAGACGATCCTGCTGCAGTTGCTGAGTTTGCAAAAACCGCAC
AATAATTAAGGATTTAATTA

Downstream 100 bases:

>100_bases
AGGTACATGATGTGGTTTAATATTGCGAAGGCCCAATCCTTCATGCCCACGCAGGGAACCGAGATTGCGAAGCAGGTCGA
CAATCTTTATGGATTCTTGC

Product: SCO1/SenC family protein

Products: NA

Alternate protein names: SCO1/SenC Family Protein; SCO1/SenC/PrrC Family Protein; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; Respiratory System Biogenesis Protein; SenC/PrrC-Like

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MLANELVLKTKTMGAVLTTAVLVLFSASAQAYDGKPAPMVANEQPKELEGVGIDEKLGTKIDLTLKVKDDNGQEVALGSF
FDGKHPVIISPVYFSCPGLCNFHLNGLTDALKLMDKDWTIGKKFKLLSVSFDSKETPDLAANKKQTYMKLYDRAGSEKEW
HFITADESTVQAMMQSLGFKFRWDEKAQEWAHASAAIVITPDGTISRYLPGIMFNPQDIKIALNEATDGKIGTFVDSLVL
YCFKYDPHQSKYTLVAFNVMKMGGAVMVLVMVIWLLPVWIRARREQNNTAGR

Sequences:

>Translated_292_residues
MLANELVLKTKTMGAVLTTAVLVLFSASAQAYDGKPAPMVANEQPKELEGVGIDEKLGTKIDLTLKVKDDNGQEVALGSF
FDGKHPVIISPVYFSCPGLCNFHLNGLTDALKLMDKDWTIGKKFKLLSVSFDSKETPDLAANKKQTYMKLYDRAGSEKEW
HFITADESTVQAMMQSLGFKFRWDEKAQEWAHASAAIVITPDGTISRYLPGIMFNPQDIKIALNEATDGKIGTFVDSLVL
YCFKYDPHQSKYTLVAFNVMKMGGAVMVLVMVIWLLPVWIRARREQNNTAGR
>Mature_292_residues
MLANELVLKTKTMGAVLTTAVLVLFSASAQAYDGKPAPMVANEQPKELEGVGIDEKLGTKIDLTLKVKDDNGQEVALGSF
FDGKHPVIISPVYFSCPGLCNFHLNGLTDALKLMDKDWTIGKKFKLLSVSFDSKETPDLAANKKQTYMKLYDRAGSEKEW
HFITADESTVQAMMQSLGFKFRWDEKAQEWAHASAAIVITPDGTISRYLPGIMFNPQDIKIALNEATDGKIGTFVDSLVL
YCFKYDPHQSKYTLVAFNVMKMGGAVMVLVMVIWLLPVWIRARREQNNTAGR

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32468; Mature: 32468

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANELVLKTKTMGAVLTTAVLVLFSASAQAYDGKPAPMVANEQPKELEGVGIDEKLGTK
CCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHCCE
IDLTLKVKDDNGQEVALGSFFDGKHPVIISPVYFSCPGLCNFHLNGLTDALKLMDKDWTI
EEEEEEEECCCCCEEEEECCCCCCCCEEEECHHHCCCCCEEEECCHHHHHHHHHCCCCCC
GKKFKLLSVSFDSKETPDLAANKKQTYMKLYDRAGSEKEWHFITADESTVQAMMQSLGFK
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCE
FRWDEKAQEWAHASAAIVITPDGTISRYLPGIMFNPQDIKIALNEATDGKIGTFVDSLVL
EEECHHHHHHHCCCEEEEECCCCCHHHHCCCCEECCCCEEEEEECCCCCCHHHHHHHHHH
YCFKYDPHQSKYTLVAFNVMKMGGAVMVLVMVIWLLPVWIRARREQNNTAGR
HHHCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLANELVLKTKTMGAVLTTAVLVLFSASAQAYDGKPAPMVANEQPKELEGVGIDEKLGTK
CCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHCCE
IDLTLKVKDDNGQEVALGSFFDGKHPVIISPVYFSCPGLCNFHLNGLTDALKLMDKDWTI
EEEEEEEECCCCCEEEEECCCCCCCCEEEECHHHCCCCCEEEECCHHHHHHHHHCCCCCC
GKKFKLLSVSFDSKETPDLAANKKQTYMKLYDRAGSEKEWHFITADESTVQAMMQSLGFK
CCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCE
FRWDEKAQEWAHASAAIVITPDGTISRYLPGIMFNPQDIKIALNEATDGKIGTFVDSLVL
EEECHHHHHHHCCCEEEEECCCCCHHHHCCCCEECCCCEEEEEECCCCCCHHHHHHHHHH
YCFKYDPHQSKYTLVAFNVMKMGGAVMVLVMVIWLLPVWIRARREQNNTAGR
HHHCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA