| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521834
Identifier: 42521834
GI number: 42521834
Start: 190690
End: 192051
Strand: Direct
Name: 42521834
Synonym: Bd0204
Alternate gene names: NA
Gene position: 190690-192051 (Clockwise)
Preceding gene: 42521832
Following gene: 42521836
Centisome position: 5.04
GC content: 52.13
Gene sequence:
>1362_bases ATGAAAAAGAAATCAGTGAACTGGAACACGATCGGCTTGATGAGTCTTTTGATCGCCGCAGGTCCCGCGGGCGCCGCTGA CAAAACGATCCATTGGGATCCAAATGCTTACTGGAGAGGCGGCGATCATTCCTATGAATGTTATGACCGGGGTGGGATAT ACCACGAAGGCATTTGTCTGGAGGGTTCCGCTTCTGCTCAGGTGGCAGCGGTCATTAACAATGATCTGCGCCGGGAGGGT GGCAACGAGACATCCATGGGCGACATGGTCACTGAAGTGGAAGGAAAGATTTCCAAGACTTTCGGAAATCGTCATTTCAA GCAGATCTTTATCTCGATCAGCGCCATTCCGAAAAATCAGGTTCTGAACTACAACGAAGAAAATGAGCAGAACTTCCACA ATTCGGACCGTCTGCGCGCCGATGGTTATGTCGACCGCCCTTGGTTTCTGGCGAATATCGGAGCGAATATTGCGATGACG GATTCCCAGGATGTGACGGTTCTGGCGGGAGCATTCCCAGTCAGTGGTTTGAGTCCTCTGCAGGGTAAGCCCAGCCGGTA CTATGTCACGGCTCCATACGGTTTGATGGTTCGTTATGACAAAGGGATTCAGATGAACTACCAGCTGAAAGAAGAGCTCG ACCGGGTGCTGCTGGCCTCGTTCAGTGTAGTGGATGGCGATACCATCAAGGGTGAATCCAGCCTGGATCCGGCGGATTCC CGCGCCAATTCCTATCCGGCCTACGCGGGCACGGTTGAATTGCGTGTGGCCAATGCACTTCGCAAGGTTTTCGACAAGTC AGCGCCTTACTTGAAGAATCATGATTTCTATATTGGTGTGACCGGGGCCCATGGGGATGTCGGAAGTTTCCCGGGTGAAA AAAGGTCCCAGGATGATATGACCACTTACCTGGGATACATGTTCACGTCCAAGTACGGTGAGGCTGAGGTGCGGGTCTTC CGCGCAGACTTCACCCGCAACAAACAAGGTGACGGAAACGGACGTCGTCCACATGCACAGCATGTGAATTCAAAGGCCCA CGGCGTGGAAGTGGCGATGCGTGGCGTGGAAGCGGGGCCCTGCGCCTGGGACTTCTATTATAATCAGCATGTGTTCAATA CTGATGCCGAGTTTGCAGATGGTGAATTCACTTTTGAGAAAGTGCGCGGGGTGCGCGGCTGGGCGGCCGGAACCACCTGT CGCAATCTTTTGGGTCTGAAGAATCTGGATATCGGCTTTGAATATGGCAGCACCCAGCTGGATCGCAAGGGTGCCAAAGA AAATCTGAAATATCCAAACAAGGCCAATCAGTTCAATCTGACATTGAGCTATCGCTTTAACATGAACAAACTTGTTCGTT AG
Upstream 100 bases:
>100_bases AAGCCGCGGTTGGATGGACCCTCTGATGATCTGGTACGGAACACTTGCCTGGCACAGTCATTGATCTTCAGGTCTTTGCA AACTTAAACAGGAGATAACA
Downstream 100 bases:
>100_bases ATAAAGCGATGGGACAGCCAGGAGAACTTTTCAGCGTTCTCCTGCAGCTCCTTTTCGGTTTTGAAAAGTTTGTCATCACG GGAGGCGGCGCTGACGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MKKKSVNWNTIGLMSLLIAAGPAGAADKTIHWDPNAYWRGGDHSYECYDRGGIYHEGICLEGSASAQVAAVINNDLRREG GNETSMGDMVTEVEGKISKTFGNRHFKQIFISISAIPKNQVLNYNEENEQNFHNSDRLRADGYVDRPWFLANIGANIAMT DSQDVTVLAGAFPVSGLSPLQGKPSRYYVTAPYGLMVRYDKGIQMNYQLKEELDRVLLASFSVVDGDTIKGESSLDPADS RANSYPAYAGTVELRVANALRKVFDKSAPYLKNHDFYIGVTGAHGDVGSFPGEKRSQDDMTTYLGYMFTSKYGEAEVRVF RADFTRNKQGDGNGRRPHAQHVNSKAHGVEVAMRGVEAGPCAWDFYYNQHVFNTDAEFADGEFTFEKVRGVRGWAAGTTC RNLLGLKNLDIGFEYGSTQLDRKGAKENLKYPNKANQFNLTLSYRFNMNKLVR
Sequences:
>Translated_453_residues MKKKSVNWNTIGLMSLLIAAGPAGAADKTIHWDPNAYWRGGDHSYECYDRGGIYHEGICLEGSASAQVAAVINNDLRREG GNETSMGDMVTEVEGKISKTFGNRHFKQIFISISAIPKNQVLNYNEENEQNFHNSDRLRADGYVDRPWFLANIGANIAMT DSQDVTVLAGAFPVSGLSPLQGKPSRYYVTAPYGLMVRYDKGIQMNYQLKEELDRVLLASFSVVDGDTIKGESSLDPADS RANSYPAYAGTVELRVANALRKVFDKSAPYLKNHDFYIGVTGAHGDVGSFPGEKRSQDDMTTYLGYMFTSKYGEAEVRVF RADFTRNKQGDGNGRRPHAQHVNSKAHGVEVAMRGVEAGPCAWDFYYNQHVFNTDAEFADGEFTFEKVRGVRGWAAGTTC RNLLGLKNLDIGFEYGSTQLDRKGAKENLKYPNKANQFNLTLSYRFNMNKLVR >Mature_453_residues MKKKSVNWNTIGLMSLLIAAGPAGAADKTIHWDPNAYWRGGDHSYECYDRGGIYHEGICLEGSASAQVAAVINNDLRREG GNETSMGDMVTEVEGKISKTFGNRHFKQIFISISAIPKNQVLNYNEENEQNFHNSDRLRADGYVDRPWFLANIGANIAMT DSQDVTVLAGAFPVSGLSPLQGKPSRYYVTAPYGLMVRYDKGIQMNYQLKEELDRVLLASFSVVDGDTIKGESSLDPADS RANSYPAYAGTVELRVANALRKVFDKSAPYLKNHDFYIGVTGAHGDVGSFPGEKRSQDDMTTYLGYMFTSKYGEAEVRVF RADFTRNKQGDGNGRRPHAQHVNSKAHGVEVAMRGVEAGPCAWDFYYNQHVFNTDAEFADGEFTFEKVRGVRGWAAGTTC RNLLGLKNLDIGFEYGSTQLDRKGAKENLKYPNKANQFNLTLSYRFNMNKLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50409; Mature: 50409
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSVNWNTIGLMSLLIAAGPAGAADKTIHWDPNAYWRGGDHSYECYDRGGIYHEGICL CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCCCEEEEECCCEEECCEEE EGSASAQVAAVINNDLRREGGNETSMGDMVTEVEGKISKTFGNRHFKQIFISISAIPKNQ CCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCC VLNYNEENEQNFHNSDRLRADGYVDRPWFLANIGANIAMTDSQDVTVLAGAFPVSGLSPL CCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCC QGKPSRYYVTAPYGLMVRYDKGIQMNYQLKEELDRVLLASFSVVDGDTIKGESSLDPADS CCCCCEEEEECCCEEEEEECCCCEEEEHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC RANSYPAYAGTVELRVANALRKVFDKSAPYLKNHDFYIGVTGAHGDVGSFPGEKRSQDDM CCCCCCCCCCEEEEHHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCHHH TTYLGYMFTSKYGEAEVRVFRADFTRNKQGDGNGRRPHAQHVNSKAHGVEVAMRGVEAGP HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCC CAWDFYYNQHVFNTDAEFADGEFTFEKVRGVRGWAAGTTCRNLLGLKNLDIGFEYGSTQL EEEEEEECCEEECCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCHH DRKGAKENLKYPNKANQFNLTLSYRFNMNKLVR HHCCCHHHCCCCCCCCEEEEEEEEEECHHHHCC >Mature Secondary Structure MKKKSVNWNTIGLMSLLIAAGPAGAADKTIHWDPNAYWRGGDHSYECYDRGGIYHEGICL CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEECCCCCCEEEEECCCEEECCEEE EGSASAQVAAVINNDLRREGGNETSMGDMVTEVEGKISKTFGNRHFKQIFISISAIPKNQ CCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCC VLNYNEENEQNFHNSDRLRADGYVDRPWFLANIGANIAMTDSQDVTVLAGAFPVSGLSPL CCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCCCC QGKPSRYYVTAPYGLMVRYDKGIQMNYQLKEELDRVLLASFSVVDGDTIKGESSLDPADS CCCCCEEEEECCCEEEEEECCCCEEEEHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC RANSYPAYAGTVELRVANALRKVFDKSAPYLKNHDFYIGVTGAHGDVGSFPGEKRSQDDM CCCCCCCCCCEEEEHHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCHHH TTYLGYMFTSKYGEAEVRVFRADFTRNKQGDGNGRRPHAQHVNSKAHGVEVAMRGVEAGP HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCC CAWDFYYNQHVFNTDAEFADGEFTFEKVRGVRGWAAGTTCRNLLGLKNLDIGFEYGSTQL EEEEEEECCEEECCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCHH DRKGAKENLKYPNKANQFNLTLSYRFNMNKLVR HHCCCHHHCCCCCCCCEEEEEEEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA