| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521823
Identifier: 42521823
GI number: 42521823
Start: 177287
End: 177952
Strand: Direct
Name: 42521823
Synonym: Bd0191
Alternate gene names: NA
Gene position: 177287-177952 (Clockwise)
Preceding gene: 42521822
Following gene: 42521827
Centisome position: 4.69
GC content: 51.05
Gene sequence:
>666_bases ATGCAGTCAGCGCAAGGTGCTCAGAAGCAAACTCCGGACAAGGTTGAAAGATTTCGTCTGTTGTGTGAGCGCCTCGCCCT GGTTCTGCAAAAAGAGGGTTTGTCCGTCAAACCCTACCGTGACCCCGCTTTGCCGCACTTTAATCAGCTGAACGAAAGCC AAAAAGACATCGCCCTTCACACCTTGAAGGACTATCTGGAAATCTGCCAGGAAGCCCACGCGGAAAGTTTCTCTTTAAAA GATTCCCCACGCTTTTGCTGGAAGGCTTTGCGCCGCTGGGGCTTGATCCCGGCCTCTGATTTTTTCGACAAATTAGAAGA ATCTGATTCTGTGGAAGTGTACACCGATGAAGGCCTGCAGGTGTTTCGAAATCTGCGCTTCTTTGAGGTTTGCACGTACA CGCTGGAAGAGCTTTATTCTTTGGAGTGGTGGAAGCTGTACGGCCGTGAAGAATCTGTGACCCGCAGCCTTTTTTCAATC TCTTTGGATTTGATCAACGGTCATATCCCAGGAACGATGAAGTTCGATACCGGCAAACACGAACTGTGGGAGCTGTCTTC TGAGGGGATGCGCCGTTTTGTGGTCGAGCCGCGGCATGCGTGTTCTCTCCGTCGTAACGGAGAGATTCGGGGATTCCTAT TTACGACGACGGTGGACTGTCTCTGA
Upstream 100 bases:
>100_bases AACCTGCCCGAGTGCCACTTCAGGTACACTGATGGCCATCGAGGGAATTTTGCGGGATCAATTCAATCCAACAATTGAAG TTATCCCGATGTGAGGATGA
Downstream 100 bases:
>100_bases ACCCAGCTGTTCTTCAGCGGATCTTTTCATGCCCGGGGCTGTGGCTTCCATGGTGTCTTCGTTGCGGCTGACAATCACGG CAGAATTTCCCAGGACTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALHTLKDYLEICQEAHAESFSLK DSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQVFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSI SLDLINGHIPGTMKFDTGKHELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL
Sequences:
>Translated_221_residues MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALHTLKDYLEICQEAHAESFSLK DSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQVFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSI SLDLINGHIPGTMKFDTGKHELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL >Mature_221_residues MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALHTLKDYLEICQEAHAESFSLK DSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQVFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSI SLDLINGHIPGTMKFDTGKHELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25835; Mature: 25835
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHH TLKDYLEICQEAHAESFSLKDSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQ HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECHHHH VFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSISLDLINGHIPGTMKFDTGKH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCH ELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL HHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECEECCC >Mature Secondary Structure MQSAQGAQKQTPDKVERFRLLCERLALVLQKEGLSVKPYRDPALPHFNQLNESQKDIALH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHH TLKDYLEICQEAHAESFSLKDSPRFCWKALRRWGLIPASDFFDKLEESDSVEVYTDEGLQ HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECHHHH VFRNLRFFEVCTYTLEELYSLEWWKLYGREESVTRSLFSISLDLINGHIPGTMKFDTGKH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCH ELWELSSEGMRRFVVEPRHACSLRRNGEIRGFLFTTTVDCL HHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA