| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521809
Identifier: 42521809
GI number: 42521809
Start: 163507
End: 163947
Strand: Direct
Name: 42521809
Synonym: Bd0176
Alternate gene names: NA
Gene position: 163507-163947 (Clockwise)
Preceding gene: 42521808
Following gene: 42521817
Centisome position: 4.32
GC content: 51.47
Gene sequence:
>441_bases TTGTTGCCACTTTTGGTGGTGCTGGCAGCATCCCAGTCCAAGGCGGTGTCCTGGAGAATCTTTGGCGCCTGCAAGAACTC TCCTGTGCATGAGGGAACCTATCAGGCGGACTTGACTAAATCAGTGGGCGCTCTGAGCCTTGAAATCTTTGATGCGAATA AGATCCCGTACGTGGGATCTGCGGAAGGCATCAATTCCATCATCAACAGCCCGATCGGTCTGGACAGCATTGAAGTTGTG TCCGACACCGAACTGCGCGCTTATGGCTGGTGTTACACTATCAACGGCAAGCAGCCGACAGAAATGCCGGACAAGATTCA ATTCAAATCCCAGGACGACAAGTTGACGTGGTTCTATGCGTACTCCACCAATAAGAATAATGAGTGGACCGACTATTGTT CCCCGGCCTACTGGATCGCGGCCGATCAGTTCTGCAAATAA
Upstream 100 bases:
>100_bases AGCCAGCCAGGCGCCTTGCCGGAAGAGATCTTTGAGCAGATCGTGGTGAAGGCCAAAGAAATCGACATGGAAGAGGTTCG TCGTGAAAACTCTTAAGCCG
Downstream 100 bases:
>100_bases AAAAAGCCCGGTGTTTCCACCGGGCTTTTTAGTATTCAAATTTGAATTCGAAATTACTTCTGGATCGTTACGTGTTTGAT CACGATTGGTTCAACCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGSAEGINSIINSPIGLDSIEVV SDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYAYSTNKNNEWTDYCSPAYWIAADQFCK
Sequences:
>Translated_146_residues MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGSAEGINSIINSPIGLDSIEVV SDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYAYSTNKNNEWTDYCSPAYWIAADQFCK >Mature_146_residues MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGSAEGINSIINSPIGLDSIEVV SDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYAYSTNKNNEWTDYCSPAYWIAADQFCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16275; Mature: 16275
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGS CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCCCC AEGINSIINSPIGLDSIEVVSDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYA HHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEE YSTNKNNEWTDYCSPAYWIAADQFCK EECCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MLPLLVVLAASQSKAVSWRIFGACKNSPVHEGTYQADLTKSVGALSLEIFDANKIPYVGS CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCCCC AEGINSIINSPIGLDSIEVVSDTELRAYGWCYTINGKQPTEMPDKIQFKSQDDKLTWFYA HHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEE YSTNKNNEWTDYCSPAYWIAADQFCK EECCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA