| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521785
Identifier: 42521785
GI number: 42521785
Start: 131949
End: 134168
Strand: Direct
Name: 42521785
Synonym: Bd0148
Alternate gene names: NA
Gene position: 131949-134168 (Clockwise)
Preceding gene: 42521782
Following gene: 42521786
Centisome position: 3.49
GC content: 47.03
Gene sequence:
>2220_bases ATGTTGAACTCACGAAGCACTTTTATTCAGAATCTTAACAACAAGCGGGGGCAAATCGCCCTGTTCGTGGCGTTGATCTT TCAGATTCTTTTCCTGTTCTTTGCGATGGTCATCAACGTCGGTCTTTTGGTTCACCATAAAATCAATCTGCAAAACTCCG TCGATCTGGCCGCCTATTACGGCGCGATGAAACAGGCCGAGGGCATGAACGTGATTGCGCACACGAACTATCAGATTCGT CAGAGCTGGAAACTGCTTGCCTGGCGGTATCGCATGCTGGGGACTGCCGGGGATTTCGAGGAGCATCCCTTCGATAAGGT GGGTGGTGGACGTATTCGTACAACCGATGACGACAGTATCAATCCTGGAGCACAGAATTTTTACGACTCCCCATCCTTCT GTATCACTTATATTCCATTTAAGCCGATGCCAGATGGAGAAAATACCTGCAAAGCTTTGTCTTCGCATACAGGAATTAAT GTATTTAAAATTCCGCCTGTGTTGATCGATTTGCCGAGTGTTTCGGGAAGAACTCGAAGTCTTGCCTTGAATCTTCGTGC TAGTTTGATTGAGCGTTGTAAAGATTTTGGATCTTTTAACTATCTCATGCTGGGTGGATTCGTTGTTGCCTTCAATATCG ATCAAGGCAATCGGGCGCTTTTGATTTCCTATCTGTCCAAGGCTATGAGTCCTAGTTCCCCTGATGCGGATTTCTTTGAT ATTGACGGCAAGAGCGTCAAGTTGGGTATGGAAAATACCCTTAAAAACAATCTGACTGCTGCTAACAATACGTCCGATTT AAAAATGAGTATCTATAATTCATTGGGGCACTCGGCCTGCAATGGGTCTCAAGGTGCCAAGGGCGAGCCTGCTCGCTGGT TAAAGCAAATCAAGACTTATCCTGGATTCAGCTACATTGATACGATCTGTACTGAAACAAGTATTACACCTAAGCCGAAG ATGCTTTCAAACGTTGAATCAGATCTTCCAAATGCGACAGTCGCAGATGGAAGATTCAGGACTGAAGTTGATGAACTGAA GAACTATATCGGCATCCGTGAGCCTATCAGCGATATCTATAACTACTCCATTGGGGTGGAAAAGAATCCGTGGTGTATGG CCTATGTAGGAGTTTCTGCATCGGCTCGCCCAAAGATTCCGTTTTCGCCCTTTGGTTCCTTGGAGATTAAAGCTCGAGCA TTCTATAAGCCCTTCGGTGGTCGCATTGGTCCGTGGTATTACAACAAGTATCCGTCGGGCTCTGCTTCTTATAACGGATC ACAAGGCAGTCCCAATGACAAAACGGATCCGAATCTGCCACCTCGTTTGATGGACCAAGCGCATGTTGGTGTGCCGGGGG ATCCGACACGAATTGCAAATTACAGTCGTTATGTCGGCGATAAAGTCGGTTTGAAAAGTCGCCGGGTTCTTTATCATTAT GGCAGAGCTATTTATAAGTTAGACCCTAACTGGGTAATTGGCTCGGACGGGAACGTTGAGCCGGGCAGTGCTCCGGTTAA CTATGGAGATACGGCGCCTAACTTCGAGCATTGGAAGCACCTGCCATTTAATTTCTATCAACGTGGCGGGAATCAGGATT TGCTCGCTTGGGATCATGCTAATGATCAGCCATCGCGCATGCGTATGCTTGAGCTTTCGGCGATTCTTCCGGATCCATTC GATTTGACCTACTATTCAATTGAACCTGATTTCTATCACAACTATTACACACGCCTGCGTGATGGATTCCTGAAGACTAT TGGTTCCGCTTACTATACCGAGAATAAAGAGTTCTTGGGTGATATTGGAACTCACAAAGGTTCCAATAAAGAGGGTATCA ACTGGGATAAATTCAGCGTCATCGATCAGTACAAAGCTGTTTCCGGAAATACATTTATGAAGACGTTCGTGGATATCGCA GGGAAACTGACTTATATCTCCACAAAATGGCAGGATGTTCTGACGTCCTGGGCGCCGGTGAGCCTTGTGGATTACAGTTT GGATCCAGCCAAGTTCGGCAAATGCACGATCACACCGAGAGGTGCTGATTCCGGTGAGCCTGAAGTGCCAAACCCAGGAA ACTGCGTTTCGGGCGGAACAACGGGCTACTCTGTGAAGATGGTTTCGTCGGACTATCTTCGTCGTACTGATCTTGAGTTG GGCGGCACAGGGGTGCGTGGAGCACTGCTGAATCCTCCTCCTGAAGACAGCGAGTTCTAA
Upstream 100 bases:
>100_bases CATGGATAAAAGTCTGTCATCTCACTATAGAACAAGTCAAAGTTTTAGAGGTCGAGTTGTTGCTTCATGAGACAACCTAC GAGACAATGCTGGGATACAG
Downstream 100 bases:
>100_bases ACAGATTTCATCTGAGCGTCTCATTCTAATACAAGACCTAAAAACTTAAGAAACTCTGACTTTTGTCCGAAAAGGATATG GTAGGGGAAATTTTATGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MLNSRSTFIQNLNNKRGQIALFVALIFQILFLFFAMVINVGLLVHHKINLQNSVDLAAYYGAMKQAEGMNVIAHTNYQIR QSWKLLAWRYRMLGTAGDFEEHPFDKVGGGRIRTTDDDSINPGAQNFYDSPSFCITYIPFKPMPDGENTCKALSSHTGIN VFKIPPVLIDLPSVSGRTRSLALNLRASLIERCKDFGSFNYLMLGGFVVAFNIDQGNRALLISYLSKAMSPSSPDADFFD IDGKSVKLGMENTLKNNLTAANNTSDLKMSIYNSLGHSACNGSQGAKGEPARWLKQIKTYPGFSYIDTICTETSITPKPK MLSNVESDLPNATVADGRFRTEVDELKNYIGIREPISDIYNYSIGVEKNPWCMAYVGVSASARPKIPFSPFGSLEIKARA FYKPFGGRIGPWYYNKYPSGSASYNGSQGSPNDKTDPNLPPRLMDQAHVGVPGDPTRIANYSRYVGDKVGLKSRRVLYHY GRAIYKLDPNWVIGSDGNVEPGSAPVNYGDTAPNFEHWKHLPFNFYQRGGNQDLLAWDHANDQPSRMRMLELSAILPDPF DLTYYSIEPDFYHNYYTRLRDGFLKTIGSAYYTENKEFLGDIGTHKGSNKEGINWDKFSVIDQYKAVSGNTFMKTFVDIA GKLTYISTKWQDVLTSWAPVSLVDYSLDPAKFGKCTITPRGADSGEPEVPNPGNCVSGGTTGYSVKMVSSDYLRRTDLEL GGTGVRGALLNPPPEDSEF
Sequences:
>Translated_739_residues MLNSRSTFIQNLNNKRGQIALFVALIFQILFLFFAMVINVGLLVHHKINLQNSVDLAAYYGAMKQAEGMNVIAHTNYQIR QSWKLLAWRYRMLGTAGDFEEHPFDKVGGGRIRTTDDDSINPGAQNFYDSPSFCITYIPFKPMPDGENTCKALSSHTGIN VFKIPPVLIDLPSVSGRTRSLALNLRASLIERCKDFGSFNYLMLGGFVVAFNIDQGNRALLISYLSKAMSPSSPDADFFD IDGKSVKLGMENTLKNNLTAANNTSDLKMSIYNSLGHSACNGSQGAKGEPARWLKQIKTYPGFSYIDTICTETSITPKPK MLSNVESDLPNATVADGRFRTEVDELKNYIGIREPISDIYNYSIGVEKNPWCMAYVGVSASARPKIPFSPFGSLEIKARA FYKPFGGRIGPWYYNKYPSGSASYNGSQGSPNDKTDPNLPPRLMDQAHVGVPGDPTRIANYSRYVGDKVGLKSRRVLYHY GRAIYKLDPNWVIGSDGNVEPGSAPVNYGDTAPNFEHWKHLPFNFYQRGGNQDLLAWDHANDQPSRMRMLELSAILPDPF DLTYYSIEPDFYHNYYTRLRDGFLKTIGSAYYTENKEFLGDIGTHKGSNKEGINWDKFSVIDQYKAVSGNTFMKTFVDIA GKLTYISTKWQDVLTSWAPVSLVDYSLDPAKFGKCTITPRGADSGEPEVPNPGNCVSGGTTGYSVKMVSSDYLRRTDLEL GGTGVRGALLNPPPEDSEF >Mature_739_residues MLNSRSTFIQNLNNKRGQIALFVALIFQILFLFFAMVINVGLLVHHKINLQNSVDLAAYYGAMKQAEGMNVIAHTNYQIR QSWKLLAWRYRMLGTAGDFEEHPFDKVGGGRIRTTDDDSINPGAQNFYDSPSFCITYIPFKPMPDGENTCKALSSHTGIN VFKIPPVLIDLPSVSGRTRSLALNLRASLIERCKDFGSFNYLMLGGFVVAFNIDQGNRALLISYLSKAMSPSSPDADFFD IDGKSVKLGMENTLKNNLTAANNTSDLKMSIYNSLGHSACNGSQGAKGEPARWLKQIKTYPGFSYIDTICTETSITPKPK MLSNVESDLPNATVADGRFRTEVDELKNYIGIREPISDIYNYSIGVEKNPWCMAYVGVSASARPKIPFSPFGSLEIKARA FYKPFGGRIGPWYYNKYPSGSASYNGSQGSPNDKTDPNLPPRLMDQAHVGVPGDPTRIANYSRYVGDKVGLKSRRVLYHY GRAIYKLDPNWVIGSDGNVEPGSAPVNYGDTAPNFEHWKHLPFNFYQRGGNQDLLAWDHANDQPSRMRMLELSAILPDPF DLTYYSIEPDFYHNYYTRLRDGFLKTIGSAYYTENKEFLGDIGTHKGSNKEGINWDKFSVIDQYKAVSGNTFMKTFVDIA GKLTYISTKWQDVLTSWAPVSLVDYSLDPAKFGKCTITPRGADSGEPEVPNPGNCVSGGTTGYSVKMVSSDYLRRTDLEL GGTGVRGALLNPPPEDSEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82141; Mature: 82141
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSRSTFIQNLNNKRGQIALFVALIFQILFLFFAMVINVGLLVHHKINLQNSVDLAAYY CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHH GAMKQAEGMNVIAHTNYQIRQSWKLLAWRYRMLGTAGDFEEHPFDKVGGGRIRTTDDDSI HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCC NPGAQNFYDSPSFCITYIPFKPMPDGENTCKALSSHTGINVFKIPPVLIDLPSVSGRTRS CCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCEE LALNLRASLIERCKDFGSFNYLMLGGFVVAFNIDQGNRALLISYLSKAMSPSSPDADFFD EEEHHHHHHHHHHHHCCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEE IDGKSVKLGMENTLKNNLTAANNTSDLKMSIYNSLGHSACNGSQGAKGEPARWLKQIKTY CCCCEEEECHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC PGFSYIDTICTETSITPKPKMLSNVESDLPNATVADGRFRTEVDELKNYIGIREPISDIY CCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHH NYSIGVEKNPWCMAYVGVSASARPKIPFSPFGSLEIKARAFYKPFGGRIGPWYYNKYPSG CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC SASYNGSQGSPNDKTDPNLPPRLMDQAHVGVPGDPTRIANYSRYVGDKVGLKSRRVLYHY CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCHHCCCCCCHHHHCC GRAIYKLDPNWVIGSDGNVEPGSAPVNYGDTAPNFEHWKHLPFNFYQRGGNQDLLAWDHA CCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHCCCCCCEEEECCC NDQPSRMRMLELSAILPDPFDLTYYSIEPDFYHNYYTRLRDGFLKTIGSAYYTENKEFLG CCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DIGTHKGSNKEGINWDKFSVIDQYKAVSGNTFMKTFVDIAGKLTYISTKWQDVLTSWAPV HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECHHHHHHHCCCCC SLVDYSLDPAKFGKCTITPRGADSGEPEVPNPGNCVSGGTTGYSVKMVSSDYLRRTDLEL EEEECCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCC GGTGVRGALLNPPPEDSEF CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLNSRSTFIQNLNNKRGQIALFVALIFQILFLFFAMVINVGLLVHHKINLQNSVDLAAYY CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHH GAMKQAEGMNVIAHTNYQIRQSWKLLAWRYRMLGTAGDFEEHPFDKVGGGRIRTTDDDSI HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCC NPGAQNFYDSPSFCITYIPFKPMPDGENTCKALSSHTGINVFKIPPVLIDLPSVSGRTRS CCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCEE LALNLRASLIERCKDFGSFNYLMLGGFVVAFNIDQGNRALLISYLSKAMSPSSPDADFFD EEEHHHHHHHHHHHHCCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEE IDGKSVKLGMENTLKNNLTAANNTSDLKMSIYNSLGHSACNGSQGAKGEPARWLKQIKTY CCCCEEEECHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCC PGFSYIDTICTETSITPKPKMLSNVESDLPNATVADGRFRTEVDELKNYIGIREPISDIY CCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHH NYSIGVEKNPWCMAYVGVSASARPKIPFSPFGSLEIKARAFYKPFGGRIGPWYYNKYPSG CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC SASYNGSQGSPNDKTDPNLPPRLMDQAHVGVPGDPTRIANYSRYVGDKVGLKSRRVLYHY CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCHHCCCCCCHHHHCC GRAIYKLDPNWVIGSDGNVEPGSAPVNYGDTAPNFEHWKHLPFNFYQRGGNQDLLAWDHA CCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHCCCCCCEEEECCC NDQPSRMRMLELSAILPDPFDLTYYSIEPDFYHNYYTRLRDGFLKTIGSAYYTENKEFLG CCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DIGTHKGSNKEGINWDKFSVIDQYKAVSGNTFMKTFVDIAGKLTYISTKWQDVLTSWAPV HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECHHHHHHHCCCCC SLVDYSLDPAKFGKCTITPRGADSGEPEVPNPGNCVSGGTTGYSVKMVSSDYLRRTDLEL EEEECCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHCCCCC GGTGVRGALLNPPPEDSEF CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA