Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521786

Identifier: 42521786

GI number: 42521786

Start: 134263

End: 135723

Strand: Direct

Name: 42521786

Synonym: Bd0149

Alternate gene names: NA

Gene position: 134263-135723 (Clockwise)

Preceding gene: 42521785

Following gene: 42521787

Centisome position: 3.55

GC content: 50.51

Gene sequence:

>1461_bases
ATGCGTAGTTTGAAGACAAGTCTTCTTTCAGGCCTAATTGCATTGTCGTTCACTGCTTCGCTCGCTCATGCAGAAGGGGC
TGGTGGGAGTACCACTCCCGCTGCCGCCTCTGGGGCGGCAAAAGATGCGCGTACCGAGGTATCCGATGAAGGTTATACTG
AAAAGCCTGGTGAGTTTAAGGCCGAAATTACTAAGTTGGAAACGGCATTAAATGCCGCCGAATCATTGGGTGGTGCTCCC
GGCGTAGCAGCTTTTAAGGATCTGAGCCAGGCTACGTCATTTTACTCTAATCTGCATGGGACCTGTGTAAAGACTCAATC
TACAGCATCTTGGTTGTGTCGAGAAAAGACGAGTCCTGAGCTTCAAAAGACACTAAACAATATTAATACCGTAGCGAGTA
TGATTACCGGAGTTGCCGTGCAAGATGCTTGTAGCAATCTCGCAAAGATCGCACGCCTAGCTCAAGGTGGTTTGACTGCA
TATACCGCAGCCTGTTCTTCTGCTCGTGCAGCTTGTGAGGCATCTTGTTCAACGGTTGCAACAAATCTTGAGCGAATTGT
GAAGACAGATTTAAATGCCATTGCTTGTAAAACTAGAACCCTGGAAAATACGACTGCTTGTAATAGTCTGGATACTCAGT
TGAATGCTGTTTCTGCGAAGATTAAGGATCTCGCGGCTACAGATAACTCAAAAGCAGATAATAAATCCATTGCGAAAAAG
AATGTCGCTTGTACTTATGAATACGCGAACATGATCGTATCTGCCGGTGCGGGTATTGCTTCCATGATTTCTTCCTTCAA
ACAAGGTCAGCAGTGTGACGAGGAGTCTAACGGTACTGGCACTGACACTACGACAACCGCTGCTGTTGACAAGTGTGCTG
ATGCGACTGTCGCGGCCAATGATCCAGAGTGTATCTGTAAAGCAAATCCAAGAACTCCGGGTTGCTCCAATTCCTATCAA
AAAGCCAATGACGGGACGACGTCTCGCCTGGCTTCCCAAGGCGCAGAGCTAGGCACAGCAAATGGCAAAGGTGACGCAAG
CACCCTTCCAGGCATTGAAAGTGATCCGTTTGCAGCTTTGCGTGACCTTGCCTCCACCAATGCGGGTGGCGGTGATTCCT
CTGGTGCCGGTGCGCCTATGGGCGGTGGCAGTGGCTTGAGTGGCTTTGGTGGTGGCAGCGGCGGTGGAGCCGGCGCCCAG
GGCGAAGCTGCGAAAAAAGGTCTGAACACTGATATTCTCGGCGGCGCCGGTGGCGGCGGTGGTGGGGGTGGTTTCGGAGG
CTTTAAAGGCTCTGACTCCAAACTGCGCCAGTACCTGCCAGGTGGAGCGAAAGATCCATCTCAAGGATTGGCAGGTCAGC
AGGCTTGGAAAAATGAAGTAACCGGCCAGGGTGGTAAATCCAACTGGGAAAAGATCAAAGAACGCTACCGCGACAACAAG
AACACTCTTTTGAATAACTAG

Upstream 100 bases:

>100_bases
TTCTAAACAGATTTCATCTGAGCGTCTCATTCTAATACAAGACCTAAAAACTTAAGAAACTCTGACTTTTGTCCGAAAAG
GATATGGTAGGGGAAATTTT

Downstream 100 bases:

>100_bases
GGGAAGCTATGACAAATTTAACAATCAGGTTCGTTTGTATATTGTCGTTGATATGGTCTCCAGTTATGGCGGGCGCAGTC
ACTGTCAGTGGCGGCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MRSLKTSLLSGLIALSFTASLAHAEGAGGSTTPAAASGAAKDARTEVSDEGYTEKPGEFKAEITKLETALNAAESLGGAP
GVAAFKDLSQATSFYSNLHGTCVKTQSTASWLCREKTSPELQKTLNNINTVASMITGVAVQDACSNLAKIARLAQGGLTA
YTAACSSARAACEASCSTVATNLERIVKTDLNAIACKTRTLENTTACNSLDTQLNAVSAKIKDLAATDNSKADNKSIAKK
NVACTYEYANMIVSAGAGIASMISSFKQGQQCDEESNGTGTDTTTTAAVDKCADATVAANDPECICKANPRTPGCSNSYQ
KANDGTTSRLASQGAELGTANGKGDASTLPGIESDPFAALRDLASTNAGGGDSSGAGAPMGGGSGLSGFGGGSGGGAGAQ
GEAAKKGLNTDILGGAGGGGGGGGFGGFKGSDSKLRQYLPGGAKDPSQGLAGQQAWKNEVTGQGGKSNWEKIKERYRDNK
NTLLNN

Sequences:

>Translated_486_residues
MRSLKTSLLSGLIALSFTASLAHAEGAGGSTTPAAASGAAKDARTEVSDEGYTEKPGEFKAEITKLETALNAAESLGGAP
GVAAFKDLSQATSFYSNLHGTCVKTQSTASWLCREKTSPELQKTLNNINTVASMITGVAVQDACSNLAKIARLAQGGLTA
YTAACSSARAACEASCSTVATNLERIVKTDLNAIACKTRTLENTTACNSLDTQLNAVSAKIKDLAATDNSKADNKSIAKK
NVACTYEYANMIVSAGAGIASMISSFKQGQQCDEESNGTGTDTTTTAAVDKCADATVAANDPECICKANPRTPGCSNSYQ
KANDGTTSRLASQGAELGTANGKGDASTLPGIESDPFAALRDLASTNAGGGDSSGAGAPMGGGSGLSGFGGGSGGGAGAQ
GEAAKKGLNTDILGGAGGGGGGGGFGGFKGSDSKLRQYLPGGAKDPSQGLAGQQAWKNEVTGQGGKSNWEKIKERYRDNK
NTLLNN
>Mature_486_residues
MRSLKTSLLSGLIALSFTASLAHAEGAGGSTTPAAASGAAKDARTEVSDEGYTEKPGEFKAEITKLETALNAAESLGGAP
GVAAFKDLSQATSFYSNLHGTCVKTQSTASWLCREKTSPELQKTLNNINTVASMITGVAVQDACSNLAKIARLAQGGLTA
YTAACSSARAACEASCSTVATNLERIVKTDLNAIACKTRTLENTTACNSLDTQLNAVSAKIKDLAATDNSKADNKSIAKK
NVACTYEYANMIVSAGAGIASMISSFKQGQQCDEESNGTGTDTTTTAAVDKCADATVAANDPECICKANPRTPGCSNSYQ
KANDGTTSRLASQGAELGTANGKGDASTLPGIESDPFAALRDLASTNAGGGDSSGAGAPMGGGSGLSGFGGGSGGGAGAQ
GEAAKKGLNTDILGGAGGGGGGGGFGGFKGSDSKLRQYLPGGAKDPSQGLAGQQAWKNEVTGQGGKSNWEKIKERYRDNK
NTLLNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48805; Mature: 48805

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLKTSLLSGLIALSFTASLAHAEGAGGSTTPAAASGAAKDARTEVSDEGYTEKPGEFK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHH
AEITKLETALNAAESLGGAPGVAAFKDLSQATSFYSNLHGTCVKTQSTASWLCREKTSPE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCHH
LQKTLNNINTVASMITGVAVQDACSNLAKIARLAQGGLTAYTAACSSARAACEASCSTVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TNLERIVKTDLNAIACKTRTLENTTACNSLDTQLNAVSAKIKDLAATDNSKADNKSIAKK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
NVACTYEYANMIVSAGAGIASMISSFKQGQQCDEESNGTGTDTTTTAAVDKCADATVAAN
CCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEECC
DPECICKANPRTPGCSNSYQKANDGTTSRLASQGAELGTANGKGDASTLPGIESDPFAAL
CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RDLASTNAGGGDSSGAGAPMGGGSGLSGFGGGSGGGAGAQGEAAKKGLNTDILGGAGGGG
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
GGGGFGGFKGSDSKLRQYLPGGAKDPSQGLAGQQAWKNEVTGQGGKSNWEKIKERYRDNK
CCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
NTLLNN
HHCCCC
>Mature Secondary Structure
MRSLKTSLLSGLIALSFTASLAHAEGAGGSTTPAAASGAAKDARTEVSDEGYTEKPGEFK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHH
AEITKLETALNAAESLGGAPGVAAFKDLSQATSFYSNLHGTCVKTQSTASWLCREKTSPE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCHH
LQKTLNNINTVASMITGVAVQDACSNLAKIARLAQGGLTAYTAACSSARAACEASCSTVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TNLERIVKTDLNAIACKTRTLENTTACNSLDTQLNAVSAKIKDLAATDNSKADNKSIAKK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
NVACTYEYANMIVSAGAGIASMISSFKQGQQCDEESNGTGTDTTTTAAVDKCADATVAAN
CCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEECC
DPECICKANPRTPGCSNSYQKANDGTTSRLASQGAELGTANGKGDASTLPGIESDPFAAL
CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RDLASTNAGGGDSSGAGAPMGGGSGLSGFGGGSGGGAGAQGEAAKKGLNTDILGGAGGGG
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
GGGGFGGFKGSDSKLRQYLPGGAKDPSQGLAGQQAWKNEVTGQGGKSNWEKIKERYRDNK
CCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
NTLLNN
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA