| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is astA [H]
Identifier: 42521767
GI number: 42521767
Start: 114269
End: 115297
Strand: Direct
Name: astA [H]
Synonym: Bd0130
Alternate gene names: 42521767
Gene position: 114269-115297 (Clockwise)
Preceding gene: 42521766
Following gene: 42521768
Centisome position: 3.02
GC content: 49.08
Gene sequence:
>1029_bases ATGAGTTTCATAATACGTCCGGTACATCACGATGATTTGAATCAACTGGTGGACCTTGCCAAGCAGTTCAATCTTTTGAA CCTGCCTGGCGATAAAAAAGTGATCGGTGAAAAGATCGATCGCAGCGAACAGTCGTTTGCGGGTAAACTTTCTAAAACCC AGTCCGAATATCTTTTCGTTCTGGAAGACGTTGAGGAAAAATACGTCGTGGGAAGTTCTCTGGTTCTGGCCAAACACGGT AACGACGAAGTTCCCCACAGTTATTTCAAAATTTTTAAACGCGACCATTTTTCCCAGGATCTGGGTGTCGGCTTTATTCA TCAAGTTTTGCGCTTTCAGCTGGATTTTGACGGTCCAACAGAAATCGGAGGACTTCTTGTTGATAAATCCTATCGCCGTC GTCCGGAAAAGCTGGGAAAACAAATCAGTCTTTCCCGTTTCCTGTACATGGGTCTTTACCCGGAACGCTTTGAAGACCGT GTGCTGTGTGAACTGACGCCGCCACTGACAGATGAGGGCCGCAGTGAATTCTGGGAGGCGCTGGGCCGCCGATTCACGGG GTTGCCGTATCAGGAAGCCGATCTTCTTTCCCAGTCCCACAAGGAATTTATCGAAAGTCTGTTCCCGCAAGATGATATTT ACCTGTGCCTGCTGGACGCCAAAGCGCGTCTGGTTTTGGGACGTGTGGGTGAAGCCACGAAGCCTGCCCAGCATCTTTTG GAAAGCATCGGCTTTAGTTATCTGGATGAAGTCGATCCTTTTGATGGGGGTCCTCACTATGGCGCCAATGTGTCCCAGAT TCTGCCGATCACTCAAGGACGTCGTCTGCGTGTGACGGAGTTTAAAGATGCCGCCTACAAAGAGCAGGGCCTTGTGGCCA CCACGGGCGAGGATTTCAAAGCGTCTCTGGCGTCTGCAGATGTGCGTGGCAATGATGTGGCCCTGGCGCCGAAGGTGCGT CAGCTTCTAAATATTGAAGTCGGCGAAGAAATTTATATGTCTCCATTTAATTACAATAGAGGAAAATAA
Upstream 100 bases:
>100_bases AAAGGGAAGGAAACGTGCACACCCCTCAGGAGCACGTCTCTATAGAGGATCTGCACAAGGCTATTGAGTTTTATAAAAGG ATCATCGAAAGGTTTTGTTT
Downstream 100 bases:
>100_bases GAAATGAGCACCACCATCTTCCCAATCAAATACAAAGGTGACTTTATCAACGGACGTTTTGTTCCGGTCAGCAAAGGGGA CGGCGAGTTTAAGGACATCA
Product: arginine N-succinyltransferase
Products: NA
Alternate protein names: AST; AOST [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSFIIRPVHHDDLNQLVDLAKQFNLLNLPGDKKVIGEKIDRSEQSFAGKLSKTQSEYLFVLEDVEEKYVVGSSLVLAKHG NDEVPHSYFKIFKRDHFSQDLGVGFIHQVLRFQLDFDGPTEIGGLLVDKSYRRRPEKLGKQISLSRFLYMGLYPERFEDR VLCELTPPLTDEGRSEFWEALGRRFTGLPYQEADLLSQSHKEFIESLFPQDDIYLCLLDAKARLVLGRVGEATKPAQHLL ESIGFSYLDEVDPFDGGPHYGANVSQILPITQGRRLRVTEFKDAAYKEQGLVATTGEDFKASLASADVRGNDVALAPKVR QLLNIEVGEEIYMSPFNYNRGK
Sequences:
>Translated_342_residues MSFIIRPVHHDDLNQLVDLAKQFNLLNLPGDKKVIGEKIDRSEQSFAGKLSKTQSEYLFVLEDVEEKYVVGSSLVLAKHG NDEVPHSYFKIFKRDHFSQDLGVGFIHQVLRFQLDFDGPTEIGGLLVDKSYRRRPEKLGKQISLSRFLYMGLYPERFEDR VLCELTPPLTDEGRSEFWEALGRRFTGLPYQEADLLSQSHKEFIESLFPQDDIYLCLLDAKARLVLGRVGEATKPAQHLL ESIGFSYLDEVDPFDGGPHYGANVSQILPITQGRRLRVTEFKDAAYKEQGLVATTGEDFKASLASADVRGNDVALAPKVR QLLNIEVGEEIYMSPFNYNRGK >Mature_341_residues SFIIRPVHHDDLNQLVDLAKQFNLLNLPGDKKVIGEKIDRSEQSFAGKLSKTQSEYLFVLEDVEEKYVVGSSLVLAKHGN DEVPHSYFKIFKRDHFSQDLGVGFIHQVLRFQLDFDGPTEIGGLLVDKSYRRRPEKLGKQISLSRFLYMGLYPERFEDRV LCELTPPLTDEGRSEFWEALGRRFTGLPYQEADLLSQSHKEFIESLFPQDDIYLCLLDAKARLVLGRVGEATKPAQHLLE SIGFSYLDEVDPFDGGPHYGANVSQILPITQGRRLRVTEFKDAAYKEQGLVATTGEDFKASLASADVRGNDVALAPKVRQ LLNIEVGEEIYMSPFNYNRGK
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine N-succinyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=285, Percent_Identity=31.9298245614035, Blast_Score=155, Evalue=4e-39,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007041 - InterPro: IPR017650 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 38807; Mature: 38675
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFIIRPVHHDDLNQLVDLAKQFNLLNLPGDKKVIGEKIDRSEQSFAGKLSKTQSEYLFV CCEEEECCCCCHHHHHHHHHHHCCEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEE LEDVEEKYVVGSSLVLAKHGNDEVPHSYFKIFKRDHFSQDLGVGFIHQVLRFQLDFDGPT EECCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCH EIGGLLVDKSYRRRPEKLGKQISLSRFLYMGLYPERFEDRVLCELTPPLTDEGRSEFWEA HHHHEEECCHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCCCHHHHHHHH LGRRFTGLPYQEADLLSQSHKEFIESLFPQDDIYLCLLDAKARLVLGRVGEATKPAQHLL HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHH ESIGFSYLDEVDPFDGGPHYGANVSQILPITQGRRLRVTEFKDAAYKEQGLVATTGEDFK HHHCHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHCCCEEECCCHHH ASLASADVRGNDVALAPKVRQLLNIEVGEEIYMSPFNYNRGK HHHHHCCCCCCCEEECHHHHHHHCCCCCCCEEECCCCCCCCC >Mature Secondary Structure SFIIRPVHHDDLNQLVDLAKQFNLLNLPGDKKVIGEKIDRSEQSFAGKLSKTQSEYLFV CEEEECCCCCHHHHHHHHHHHCCEECCCCCHHHHHHHHCCHHHHHHHHHHCCCCCEEEE LEDVEEKYVVGSSLVLAKHGNDEVPHSYFKIFKRDHFSQDLGVGFIHQVLRFQLDFDGPT EECCHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHEECCCCCCH EIGGLLVDKSYRRRPEKLGKQISLSRFLYMGLYPERFEDRVLCELTPPLTDEGRSEFWEA HHHHEEECCHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCCCHHHHHHHH LGRRFTGLPYQEADLLSQSHKEFIESLFPQDDIYLCLLDAKARLVLGRVGEATKPAQHLL HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHH ESIGFSYLDEVDPFDGGPHYGANVSQILPITQGRRLRVTEFKDAAYKEQGLVATTGEDFK HHHCHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHCCCEEECCCHHH ASLASADVRGNDVALAPKVRQLLNIEVGEEIYMSPFNYNRGK HHHHHCCCCCCCEEECHHHHHHHCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA