Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521733

Identifier: 42521733

GI number: 42521733

Start: 83846

End: 84274

Strand: Direct

Name: 42521733

Synonym: Bd0088

Alternate gene names: NA

Gene position: 83846-84274 (Clockwise)

Preceding gene: 42521732

Following gene: 42521734

Centisome position: 2.22

GC content: 46.15

Gene sequence:

>429_bases
ATGAAAAAGATCATGATTGCTTTACTTTCCCTTGGGTCGATGTTCCTTGCGACGGTCTCTCAAGCTTCCGAGGTGGGCAC
TTACACTCTTAACAAATCCCGCTCTTTGTTTAGTGGCGCTCAAGTGTTCCAATTGGAGCTGTCAGAGGGCTATCAAATGA
GCTTTACCAGCAAGGAACTGGGTCATTGCAGTACCAGCAAAAAGCTGACGAACACCAACTATATTTATGCTTTGGCAGAA
GGCCCTGGCATGGCCGAAAATCTTTGGGGCACCGTTTTCTGCGATAACAAGCAGTGGTTCACGGTTTACCTGAAGGTCAA
AGACGGTTACCTGCCAAGATCCGGCGAAACAGTTTCTGGCAGTCTAAGAATTTCGGATTCTTCTTTTGATGAAGTTCTGG
AAGTCAAAGTTGCGATTACGAAACACTAG

Upstream 100 bases:

>100_bases
TCCTCTGGCATGTCCGTTGCTTTTCGTCTCTTACAAATACAATAACTCAAAGCCTCCGCTTCGGCGTGCTCTAAGAGTCC
ATATCTGTAAGAGGTGTCTT

Downstream 100 bases:

>100_bases
ATAAATTCCAATACTGCGAATCAGAAAAGATGAACTTGAGAGCAAAATGCTCTCAAGTTTTCGCTTTACTCCCGCCTCAA
GGTGCGCGCTAATTGTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKKIMIALLSLGSMFLATVSQASEVGTYTLNKSRSLFSGAQVFQLELSEGYQMSFTSKELGHCSTSKKLTNTNYIYALAE
GPGMAENLWGTVFCDNKQWFTVYLKVKDGYLPRSGETVSGSLRISDSSFDEVLEVKVAITKH

Sequences:

>Translated_142_residues
MKKIMIALLSLGSMFLATVSQASEVGTYTLNKSRSLFSGAQVFQLELSEGYQMSFTSKELGHCSTSKKLTNTNYIYALAE
GPGMAENLWGTVFCDNKQWFTVYLKVKDGYLPRSGETVSGSLRISDSSFDEVLEVKVAITKH
>Mature_142_residues
MKKIMIALLSLGSMFLATVSQASEVGTYTLNKSRSLFSGAQVFQLELSEGYQMSFTSKELGHCSTSKKLTNTNYIYALAE
GPGMAENLWGTVFCDNKQWFTVYLKVKDGYLPRSGETVSGSLRISDSSFDEVLEVKVAITKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15686; Mature: 15686

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIMIALLSLGSMFLATVSQASEVGTYTLNKSRSLFSGAQVFQLELSEGYQMSFTSKEL
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCCHH
GHCSTSKKLTNTNYIYALAEGPGMAENLWGTVFCDNKQWFTVYLKVKDGYLPRSGETVSG
CCCCCCCEECCCEEEEEEECCCCCCHHCCEEEEECCCEEEEEEEEEECCCCCCCCCEEEE
SLRISDSSFDEVLEVKVAITKH
EEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKIMIALLSLGSMFLATVSQASEVGTYTLNKSRSLFSGAQVFQLELSEGYQMSFTSKEL
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCCHH
GHCSTSKKLTNTNYIYALAEGPGMAENLWGTVFCDNKQWFTVYLKVKDGYLPRSGETVSG
CCCCCCCEECCCEEEEEEECCCCCCHHCCEEEEECCCEEEEEEEEEECCCCCCCCCEEEE
SLRISDSSFDEVLEVKVAITKH
EEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA