| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521734
Identifier: 42521734
GI number: 42521734
Start: 84356
End: 85216
Strand: Direct
Name: 42521734
Synonym: Bd0089
Alternate gene names: NA
Gene position: 84356-85216 (Clockwise)
Preceding gene: 42521733
Following gene: 42521735
Centisome position: 2.23
GC content: 51.34
Gene sequence:
>861_bases GTGCGCGCTAATTGTGCCATGACATCAAGTGCGGCGACGACCAAACCTCAGTTAAAAGACTATCTGAATGTCACCTTCTT TCTGAAGGACATCTATGCCTTTCGTAAGGCACATGAAGACAGCTTTTCCTATGAATCCTGGGCCTTTGAGCTTGGCTTTG AACATCGCTCCTTCCTGCGTCAGGTGGTGATCGGGCGCAGGGCTTTGACCGATACCACCGCCGCACAGATCAGCCAGCGC ATGTTCTTTACCGAGGCGGAGCGGGAGCACTTTATGGTTCTTTACCGCTATTCACGCAGCCGCACACAGCCCGAGCGCGA TCTGTTCGGCAAAAGACTGATGCAGATTCTGAAGGACAACTATTATCAGACAGAGGTAGAAGTTTCAGAAGACTTCCTGC GCTCTCCGCTGTTCCCGCGCATGCAGGTTCTTTTAAGTCTTGGTGATAAAGCCAAGACGGTCGAAGAAATGGCACGGCTG TTACAAGCCGATGTGCTGGAAGTGGAAAAAGGCATTGTGATTTTGACCCGTTTGAATCTGGCAGAACAGGTGGGGGCCGG CTACCGAGCCACAGTCAGCAGCTTCAAAGTTCCCAGCAGCCTTGGCAACGAGGTTCTGCTGAATTACCACAAGAACAATC TGCAAGAGGCCATCTCGGCGACCAACTTGCCCGGCCATCTCAGACGCTATAAGAGCCTGATTCTGGCCATGTCCCAGGAA GAGTTTGAGCAGTTCCTTAAAAACATGGACGCTTTCGTTAAAGAGCAGCTGCATCGCTTTGACACGTCCAACGAGACAGA GTCCCGTCGTCTATTTCAGGTGAACATGAACCTGTTTTCTGTCAGCACCCAACTGGATTAA
Upstream 100 bases:
>100_bases TGCGATTACGAAACACTAGATAAATTCCAATACTGCGAATCAGAAAAGATGAACTTGAGAGCAAAATGCTCTCAAGTTTT CGCTTTACTCCCGCCTCAAG
Downstream 100 bases:
>100_bases ATCTTGAGAGCGGACTGCTCTCAAGGGCGCGTAATTTGAACTGATTTCACAAGAATGTCGAATCGGTGATCGGTGGTCTT TTGGGCTGGCAATCCTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRANCAMTSSAATTKPQLKDYLNVTFFLKDIYAFRKAHEDSFSYESWAFELGFEHRSFLRQVVIGRRALTDTTAAQISQR MFFTEAEREHFMVLYRYSRSRTQPERDLFGKRLMQILKDNYYQTEVEVSEDFLRSPLFPRMQVLLSLGDKAKTVEEMARL LQADVLEVEKGIVILTRLNLAEQVGAGYRATVSSFKVPSSLGNEVLLNYHKNNLQEAISATNLPGHLRRYKSLILAMSQE EFEQFLKNMDAFVKEQLHRFDTSNETESRRLFQVNMNLFSVSTQLD
Sequences:
>Translated_286_residues MRANCAMTSSAATTKPQLKDYLNVTFFLKDIYAFRKAHEDSFSYESWAFELGFEHRSFLRQVVIGRRALTDTTAAQISQR MFFTEAEREHFMVLYRYSRSRTQPERDLFGKRLMQILKDNYYQTEVEVSEDFLRSPLFPRMQVLLSLGDKAKTVEEMARL LQADVLEVEKGIVILTRLNLAEQVGAGYRATVSSFKVPSSLGNEVLLNYHKNNLQEAISATNLPGHLRRYKSLILAMSQE EFEQFLKNMDAFVKEQLHRFDTSNETESRRLFQVNMNLFSVSTQLD >Mature_286_residues MRANCAMTSSAATTKPQLKDYLNVTFFLKDIYAFRKAHEDSFSYESWAFELGFEHRSFLRQVVIGRRALTDTTAAQISQR MFFTEAEREHFMVLYRYSRSRTQPERDLFGKRLMQILKDNYYQTEVEVSEDFLRSPLFPRMQVLLSLGDKAKTVEEMARL LQADVLEVEKGIVILTRLNLAEQVGAGYRATVSSFKVPSSLGNEVLLNYHKNNLQEAISATNLPGHLRRYKSLILAMSQE EFEQFLKNMDAFVKEQLHRFDTSNETESRRLFQVNMNLFSVSTQLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33265; Mature: 33265
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRANCAMTSSAATTKPQLKDYLNVTFFLKDIYAFRKAHEDSFSYESWAFELGFEHRSFLR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH QVVIGRRALTDTTAAQISQRMFFTEAEREHFMVLYRYSRSRTQPERDLFGKRLMQILKDN HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEHHCCCCCHHHHHHHHHHHHHHCC YYQTEVEVSEDFLRSPLFPRMQVLLSLGDKAKTVEEMARLLQADVLEVEKGIVILTRLNL CCEEHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCH AEQVGAGYRATVSSFKVPSSLGNEVLLNYHKNNLQEAISATNLPGHLRRYKSLILAMSQE HHHHCCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EFEQFLKNMDAFVKEQLHRFDTSNETESRRLFQVNMNLFSVSTQLD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCEEEECCCCC >Mature Secondary Structure MRANCAMTSSAATTKPQLKDYLNVTFFLKDIYAFRKAHEDSFSYESWAFELGFEHRSFLR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHH QVVIGRRALTDTTAAQISQRMFFTEAEREHFMVLYRYSRSRTQPERDLFGKRLMQILKDN HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEHHCCCCCHHHHHHHHHHHHHHCC YYQTEVEVSEDFLRSPLFPRMQVLLSLGDKAKTVEEMARLLQADVLEVEKGIVILTRLNL CCEEHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCH AEQVGAGYRATVSSFKVPSSLGNEVLLNYHKNNLQEAISATNLPGHLRRYKSLILAMSQE HHHHCCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EFEQFLKNMDAFVKEQLHRFDTSNETESRRLFQVNMNLFSVSTQLD HHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA