Click here to switch to the map view.

The map label for this gene is 42521690

Identifier: 42521690

GI number: 42521690

Start: 38608

End: 39180

Strand: Direct

Name: 42521690

Synonym: Bd0042

Alternate gene names: NA

Gene position: 38608-39180 (Clockwise)

Preceding gene: 42521689

Following gene: 42521691

Centisome position: 1.02

GC content: 44.33

Gene sequence:

>573_bases
ATGTTCAAGGCTCTTATTGCGGCCCTAGGTTTGGCGTTCTCTGTTAATGCAGTTGCAGCACCATCTATCACGGAAGTAGT
AGTTCAGGCTCAAATGCCTGGTATTCTGGAACAGGCTCAAACAACTGGTTTGGACTGGAAAGTTGGCGACAGAGCTGACT
ACAGCATCGACATGGGCTTCATCAAAGGCTCCATGATCACGTCTGTAGCTTCTATCGGCGCTGATGGCATCTGGATGAAT
CAGGATATGGATCTTGGTTTTGCTGGTAAGCAAAAAATGGAAATGCTGATCGATCCAAACACTGGCGAAACCAAAAAATT
GCTGGTGAACGGTAAAGAACAACAAATCCCTAAACAAGACATCGAAGTTATCGAAGTTAAAGAAGCGCGCATCACAGTTC
CTGCTGGAACTTTCGATTGCATCCACGCTCGTCTTAAAAACAAAGAAGACAACTCTGAAATCAACGCTTGGATCAATCCA
CAGCTGATTCCAATGTCTGGTTTGTTGAAACAAGTTGCTCCAAGCCAATTCGGCCAAGTGACTGTAGCTTTGAAATCATT
CCAGAAGAAATAA

Upstream 100 bases:

>100_bases
TCTTGTGAGTAGTTACAGAGAACAATAAATAGAGTCTTGACTGCACCACCCTTGGTCGTGGTCTCATTAGGAGACCATAT
AACCATTCAAGGAGGAATTT

Downstream 100 bases:

>100_bases
TTCATGAGAATGACAGTGATGAGAGCCGCCTTAACAGCGGCTCTTTCCTTTTTGACCCTGCCCGCTTTTTCTCAGACAAA
ACTTCCCAAGTCTGAGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MFKALIAALGLAFSVNAVAAPSITEVVVQAQMPGILEQAQTTGLDWKVGDRADYSIDMGFIKGSMITSVASIGADGIWMN
QDMDLGFAGKQKMEMLIDPNTGETKKLLVNGKEQQIPKQDIEVIEVKEARITVPAGTFDCIHARLKNKEDNSEINAWINP
QLIPMSGLLKQVAPSQFGQVTVALKSFQKK

Sequences:

>Translated_190_residues
MFKALIAALGLAFSVNAVAAPSITEVVVQAQMPGILEQAQTTGLDWKVGDRADYSIDMGFIKGSMITSVASIGADGIWMN
QDMDLGFAGKQKMEMLIDPNTGETKKLLVNGKEQQIPKQDIEVIEVKEARITVPAGTFDCIHARLKNKEDNSEINAWINP
QLIPMSGLLKQVAPSQFGQVTVALKSFQKK
>Mature_190_residues
MFKALIAALGLAFSVNAVAAPSITEVVVQAQMPGILEQAQTTGLDWKVGDRADYSIDMGFIKGSMITSVASIGADGIWMN
QDMDLGFAGKQKMEMLIDPNTGETKKLLVNGKEQQIPKQDIEVIEVKEARITVPAGTFDCIHARLKNKEDNSEINAWINP
QLIPMSGLLKQVAPSQFGQVTVALKSFQKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20634; Mature: 20634

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKALIAALGLAFSVNAVAAPSITEVVVQAQMPGILEQAQTTGLDWKVGDRADYSIDMGF
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCEEEEHH
IKGSMITSVASIGADGIWMNQDMDLGFAGKQKMEMLIDPNTGETKKLLVNGKEQQIPKQD
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHCCCCCC
IEVIEVKEARITVPAGTFDCIHARLKNKEDNSEINAWINPQLIPMSGLLKQVAPSQFGQV
CEEEEEECCEEEECCCCHHHHHHHHCCCCCCCCEEEEECCEEECHHHHHHHHCCHHHCHH
TVALKSFQKK
HHHHHHHCCC
>Mature Secondary Structure
MFKALIAALGLAFSVNAVAAPSITEVVVQAQMPGILEQAQTTGLDWKVGDRADYSIDMGF
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCEEEEHH
IKGSMITSVASIGADGIWMNQDMDLGFAGKQKMEMLIDPNTGETKKLLVNGKEQQIPKQD
HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCHHCCCCCC
IEVIEVKEARITVPAGTFDCIHARLKNKEDNSEINAWINPQLIPMSGLLKQVAPSQFGQV
CEEEEEECCEEEECCCCHHHHHHHHCCCCCCCCEEEEECCEEECHHHHHHHHCCHHHCHH
TVALKSFQKK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA