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The map label for this gene is tnpA [C]

Identifier: 38638072

GI number: 38638072

Start: 429848

End: 431014

Strand: Direct

Name: tnpA [C]

Synonym: PHG411

Alternate gene names: 38638072

Gene position: 429848-431014 (Clockwise)

Preceding gene: 38638071

Following gene: 38638073

Centisome position: 95.07

GC content: 61.78

Gene sequence:

>1167_bases
GTGGCCGAACTGCTGTCGACCTACGCGGCCTTGCTCGCCCATGGCACCGAGATCGATGCCAAGGGCATTGCTGCGATGAT
TCCCGGCATCGACGCCGCTCAGGTGTCACTTGCCATGCGCGGGCTGGAGACCCATGGCCGTTTGCGCAGGGCCAACGAGG
TGGTGGCTGAATTTCAAGGAAAGATCCCATTAGCCACGCACTGGGGCACCGGAAACAAGGCATCGGCCGACATGATGTCA
CTGGACGTTTCACGACATCTGTGGATCGCTCGTGTTGATCCACGTCGACGCACCTACGCGACCGGCATCTACACCCACGT
GCTCGACAAGTGGGGCATCGTCTATGACCAACCGATCGTCTTGAATGAGCGTCAGGCAGGGGTTGCCATCGAGGGCGTAG
AGCAGCACAACCGCAGCGAGGACCGTATCCGCCTGTCGTTACTGGCAGTGGACACCCACGGCTACACGAACGCCGCGTTG
GCCCTGGCCAAGGGCCTGAATTTCGACCTATGCCCGCGGCTGCGCGATCTGGCAGAGCGCAAGCTGTACCTGCCTGCAGC
GTTCAAAGTGCCGGAAGGCATCGAGCGTGTCACCACGAAGCGCTTGTCCTTGAGAGCCATACGCCTGGGTTGGGACGATT
TCCTACGGGTGCTGGCATCGATCCGTATCGGCCGCATTAGCGCTGAGCTCGCGATGCAACGGTTAGGCAGCGCCGCCAGG
ACCAACAAGGCGCACAAAGCTGCCGAGCATCTCGGCCGGCTGTTGCGTAGCATCTTCCTGTGCGACTACGTGACCATTGA
AGACTTCCGCCGTGAAATCCATACATTGCTCAGCCGGGGGGAGTCGGTGCACCAGCTGCAGCGCGCGATCCATGCTGGCC
GGGTACCACACGAACGCGGCCGGCGAGGCGATGAGATGACGGCGATCTCGGGGGCACACGCGCTTCTGACCAACATCGTA
CTGGCGTGGAATACGCACCGCATGAACGATGTCGTCGAGCGACTTCGCAAGGGGGGCACGAATATCGAGGACGCTTGGCT
GCGCCGCATGGGGCCAGGGCATTTCGGGCACATCAACTTCCGCGGGATCCTCAGCTTCGGTGTCGAGCGCTACATTGACG
CGCTGATCCAAGGCCGCCGCGCAACAATCCGACAGGCTATGGCATGA

Upstream 100 bases:

>100_bases
TCTTACGTTGAACGATGGTATCCCTCCATCGTCGGAGAACTTGCCGCTTAGTTAGCCCCCAGTTTGGCGCGGTCTCCTAC
TCGGGCACCGGGCGAAGTCC

Downstream 100 bases:

>100_bases
CCGCAACATCAAACGCCGCAGAGCAAAATCTGCCACAGATTGGCACACCGCAGTGGCTTGAGGCCGAGATACGGCAGTAC
CTTTGCAGCGGCAGCTACGA

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MAELLSTYAALLAHGTEIDAKGIAAMIPGIDAAQVSLAMRGLETHGRLRRANEVVAEFQGKIPLATHWGTGNKASADMMS
LDVSRHLWIARVDPRRRTYATGIYTHVLDKWGIVYDQPIVLNERQAGVAIEGVEQHNRSEDRIRLSLLAVDTHGYTNAAL
ALAKGLNFDLCPRLRDLAERKLYLPAAFKVPEGIERVTTKRLSLRAIRLGWDDFLRVLASIRIGRISAELAMQRLGSAAR
TNKAHKAAEHLGRLLRSIFLCDYVTIEDFRREIHTLLSRGESVHQLQRAIHAGRVPHERGRRGDEMTAISGAHALLTNIV
LAWNTHRMNDVVERLRKGGTNIEDAWLRRMGPGHFGHINFRGILSFGVERYIDALIQGRRATIRQAMA

Sequences:

>Translated_388_residues
MAELLSTYAALLAHGTEIDAKGIAAMIPGIDAAQVSLAMRGLETHGRLRRANEVVAEFQGKIPLATHWGTGNKASADMMS
LDVSRHLWIARVDPRRRTYATGIYTHVLDKWGIVYDQPIVLNERQAGVAIEGVEQHNRSEDRIRLSLLAVDTHGYTNAAL
ALAKGLNFDLCPRLRDLAERKLYLPAAFKVPEGIERVTTKRLSLRAIRLGWDDFLRVLASIRIGRISAELAMQRLGSAAR
TNKAHKAAEHLGRLLRSIFLCDYVTIEDFRREIHTLLSRGESVHQLQRAIHAGRVPHERGRRGDEMTAISGAHALLTNIV
LAWNTHRMNDVVERLRKGGTNIEDAWLRRMGPGHFGHINFRGILSFGVERYIDALIQGRRATIRQAMA
>Mature_387_residues
AELLSTYAALLAHGTEIDAKGIAAMIPGIDAAQVSLAMRGLETHGRLRRANEVVAEFQGKIPLATHWGTGNKASADMMSL
DVSRHLWIARVDPRRRTYATGIYTHVLDKWGIVYDQPIVLNERQAGVAIEGVEQHNRSEDRIRLSLLAVDTHGYTNAALA
LAKGLNFDLCPRLRDLAERKLYLPAAFKVPEGIERVTTKRLSLRAIRLGWDDFLRVLASIRIGRISAELAMQRLGSAART
NKAHKAAEHLGRLLRSIFLCDYVTIEDFRREIHTLLSRGESVHQLQRAIHAGRVPHERGRRGDEMTAISGAHALLTNIVL
AWNTHRMNDVVERLRKGGTNIEDAWLRRMGPGHFGHINFRGILSFGVERYIDALIQGRRATIRQAMA

Specific function: Required for transposition of transposon Tn5271 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 43417; Mature: 43286

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELLSTYAALLAHGTEIDAKGIAAMIPGIDAAQVSLAMRGLETHGRLRRANEVVAEFQG
CHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIPLATHWGTGNKASADMMSLDVSRHLWIARVDPRRRTYATGIYTHVLDKWGIVYDQPIV
CCCEEEECCCCCCCCHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCEECCCEE
LNERQAGVAIEGVEQHNRSEDRIRLSLLAVDTHGYTNAALALAKGLNFDLCPRLRDLAER
ECCCCCCCEEECHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHH
KLYLPAAFKVPEGIERVTTKRLSLRAIRLGWDDFLRVLASIRIGRISAELAMQRLGSAAR
CEECCCCCCCCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
TNKAHKAAEHLGRLLRSIFLCDYVTIEDFRREIHTLLSRGESVHQLQRAIHAGRVPHERG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHC
RRGDEMTAISGAHALLTNIVLAWNTHRMNDVVERLRKGGTNIEDAWLRRMGPGHFGHINF
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEH
RGILSFGVERYIDALIQGRRATIRQAMA
HHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
AELLSTYAALLAHGTEIDAKGIAAMIPGIDAAQVSLAMRGLETHGRLRRANEVVAEFQG
HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIPLATHWGTGNKASADMMSLDVSRHLWIARVDPRRRTYATGIYTHVLDKWGIVYDQPIV
CCCEEEECCCCCCCCHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHCCCEECCCEE
LNERQAGVAIEGVEQHNRSEDRIRLSLLAVDTHGYTNAALALAKGLNFDLCPRLRDLAER
ECCCCCCCEEECHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHH
KLYLPAAFKVPEGIERVTTKRLSLRAIRLGWDDFLRVLASIRIGRISAELAMQRLGSAAR
CEECCCCCCCCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
TNKAHKAAEHLGRLLRSIFLCDYVTIEDFRREIHTLLSRGESVHQLQRAIHAGRVPHERG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHC
RRGDEMTAISGAHALLTNIVLAWNTHRMNDVVERLRKGGTNIEDAWLRRMGPGHFGHINF
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEH
RGILSFGVERYIDALIQGRRATIRQAMA
HHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1656436 [H]