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The map label for this gene is tnpA

Identifier: 38638073

GI number: 38638073

Start: 432393

End: 433412

Strand: Direct

Name: tnpA

Synonym: PHG412

Alternate gene names: NA

Gene position: 432393-433412 (Clockwise)

Preceding gene: 38638072

Following gene: 38638074

Centisome position: 95.63

GC content: 60.39

Gene sequence:

>1020_bases
ATGAATTCTATGGCCGTGGGTGTGGATATCGCGAAGACGGTGTTTCAGGTGCACTACATCGACCAGGCAACGGGCGAGAT
CGTGAACAAGCAGATCAAGCGAGCCAAGTTCCTCGAGCACTTTGCGAACCGTGCTCCCTGCCTAATCGGAATGGAGGCGT
GCGGCGGTGCACACCATTGGGCGAGGCAGCTGACGAAGATGGGTCACCAGGTGAGGCTGATGCCAGCAGAGTTCGTGAAG
GCGTTCAACATCCGCAATAAGAATGATGCAGCGGATGCCCGGGCGATCTGGCTGGCGGTCCAGCAGCCCAGCAAGGCGGT
TGCGGTGAAGACCGAGATGCAGCAGGCAATGCTGGCCCTGCACCGTATGCGTGAGCAACTGGTGAAGTTCCGCACCATGC
AGATCAACGCATTGCGCGGTCTGCTAACGGAGTACGGCGAAGTGATGGGCAAAGGCCGGACAGCCTTGGATAAGGCGATA
CCGGAAGTGCTCGCCCGGGTTGCCGAGCGCTTGCCGGCGGCGCTGGTCGAGACATTGCGCGAGCAGTGGAGTGGCCTCAC
GAAGCTGGACGAACAGATAGCCGGCATTGAGCGGCGAATGCGCGACTGGGTCAAAGAGGACAAGGCTGTGAAGGCGATCA
GCGAGATCCCTGGCGTGGGACTGCTGACGGCGACAGCAACGGTCGCGATGATGGGCGATGCGAAAACATTCCGGTCAGGG
CGGGAGTTTGCCGCGTGGGCAGGCCTGGTGCCGAAGCAAACCGGATCGGGCGGAAAGGTGAATCTGCACGGGATCAGCAA
AAGAGGCGATACGTATCTGCGTACGCTCTTGATCCACGGTGCGCGCAGCGTCGTGACGCGTGCTAAGGATCCCGGTCCCT
GGGTGGAGCAAATGACAAAGCGGCGGCCTTTGAATGTCGTGGTCGTTGCGCTGGCCAACAAGATGGCGCGCATGATATGG
GCGATTCTGGCCCATGACCGGCCGTACCAGAAGGATTACATCAGCGTGAAGCCGGCTTGA

Upstream 100 bases:

>100_bases
TGGGGTCAAGGGATCTTGAGGTCGATCCTCACGGGCCAACGACATCGAAGTGTCCAAGTGGGAAGATGTACACATTTCCC
GGCAACCGGAGGATCGTGAA

Downstream 100 bases:

>100_bases
GCGGTAAGCGCCACGTTGGAGATTAGCGTTCTTACAGGGTGAAACGTCGAAGGTTGCGTTGGTAATCGAGTGTGATGACA
AGTCAGGTAGGACCGGGACC

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNSMAVGVDIAKTVFQVHYIDQATGEIVNKQIKRAKFLEHFANRAPCLIGMEACGGAHHWARQLTKMGHQVRLMPAEFVK
AFNIRNKNDAADARAIWLAVQQPSKAVAVKTEMQQAMLALHRMREQLVKFRTMQINALRGLLTEYGEVMGKGRTALDKAI
PEVLARVAERLPAALVETLREQWSGLTKLDEQIAGIERRMRDWVKEDKAVKAISEIPGVGLLTATATVAMMGDAKTFRSG
REFAAWAGLVPKQTGSGGKVNLHGISKRGDTYLRTLLIHGARSVVTRAKDPGPWVEQMTKRRPLNVVVVALANKMARMIW
AILAHDRPYQKDYISVKPA

Sequences:

>Translated_339_residues
MNSMAVGVDIAKTVFQVHYIDQATGEIVNKQIKRAKFLEHFANRAPCLIGMEACGGAHHWARQLTKMGHQVRLMPAEFVK
AFNIRNKNDAADARAIWLAVQQPSKAVAVKTEMQQAMLALHRMREQLVKFRTMQINALRGLLTEYGEVMGKGRTALDKAI
PEVLARVAERLPAALVETLREQWSGLTKLDEQIAGIERRMRDWVKEDKAVKAISEIPGVGLLTATATVAMMGDAKTFRSG
REFAAWAGLVPKQTGSGGKVNLHGISKRGDTYLRTLLIHGARSVVTRAKDPGPWVEQMTKRRPLNVVVVALANKMARMIW
AILAHDRPYQKDYISVKPA
>Mature_339_residues
MNSMAVGVDIAKTVFQVHYIDQATGEIVNKQIKRAKFLEHFANRAPCLIGMEACGGAHHWARQLTKMGHQVRLMPAEFVK
AFNIRNKNDAADARAIWLAVQQPSKAVAVKTEMQQAMLALHRMREQLVKFRTMQINALRGLLTEYGEVMGKGRTALDKAI
PEVLARVAERLPAALVETLREQWSGLTKLDEQIAGIERRMRDWVKEDKAVKAISEIPGVGLLTATATVAMMGDAKTFRSG
REFAAWAGLVPKQTGSGGKVNLHGISKRGDTYLRTLLIHGARSVVTRAKDPGPWVEQMTKRRPLNVVVVALANKMARMIW
AILAHDRPYQKDYISVKPA

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 37705; Mature: 37705

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMAVGVDIAKTVFQVHYIDQATGEIVNKQIKRAKFLEHFANRAPCLIGMEACGGAHHW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHH
ARQLTKMGHQVRLMPAEFVKAFNIRNKNDAADARAIWLAVQQPSKAVAVKTEMQQAMLAL
HHHHHHCCCEEEECHHHHHHHHCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHH
HRMREQLVKFRTMQINALRGLLTEYGEVMGKGRTALDKAIPEVLARVAERLPAALVETLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQWSGLTKLDEQIAGIERRMRDWVKEDKAVKAISEIPGVGLLTATATVAMMGDAKTFRSG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCC
REFAAWAGLVPKQTGSGGKVNLHGISKRGDTYLRTLLIHGARSVVTRAKDPGPWVEQMTK
CHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
RRPLNVVVVALANKMARMIWAILAHDRPYQKDYISVKPA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC
>Mature Secondary Structure
MNSMAVGVDIAKTVFQVHYIDQATGEIVNKQIKRAKFLEHFANRAPCLIGMEACGGAHHW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHH
ARQLTKMGHQVRLMPAEFVKAFNIRNKNDAADARAIWLAVQQPSKAVAVKTEMQQAMLAL
HHHHHHCCCEEEECHHHHHHHHCCCCCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHH
HRMREQLVKFRTMQINALRGLLTEYGEVMGKGRTALDKAIPEVLARVAERLPAALVETLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQWSGLTKLDEQIAGIERRMRDWVKEDKAVKAISEIPGVGLLTATATVAMMGDAKTFRSG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCC
REFAAWAGLVPKQTGSGGKVNLHGISKRGDTYLRTLLIHGARSVVTRAKDPGPWVEQMTK
CHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
RRPLNVVVVALANKMARMIWAILAHDRPYQKDYISVKPA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]