Click here to switch to the map view.

The map label for this gene is trbL

Identifier: 38638025

GI number: 38638025

Start: 378206

End: 379162

Strand: Direct

Name: trbL

Synonym: PHG364

Alternate gene names: NA

Gene position: 378206-379162 (Clockwise)

Preceding gene: 38638024

Following gene: 38638026

Centisome position: 83.65

GC content: 59.56

Gene sequence:

>957_bases
ATGATTGGGTCGCAGGCGGAAGAATCCACCAAGACCCCGCCGTCATTCTCCGGACAGAAAGGGACGATCGCCGAATCTCT
CAAAAGTTGGGTCGGCCAGTTCGAGTCGTTTCGCAGCGGCCTGATCGCAAGCGCTACACCGCTGAGTCAGACCATCCGAT
CGGAGACCGACAAGGTGGCTTATGGCTTAGCACTCATCACGCTGACTCTGGCCGGCATCCGATTCGCTGCAACGAACGAT
CCGACCACGGCGTGGACGGACATTTTTGAGGCGTTCATGCTCTTGGGGATCTTCGCAGGGATCTATTTGGGGTACGACAA
GTTCGCACCGGGAATTTTTGACTGGTTCAAAATGCTCGGCGACAAGATCGCCGGTACTCGCTCCAGCAATCCGGCCTTGA
CGCTCATCTCGGTAGGCACCGGCTTCCTCGACACCTACAACAAGGCTATGGACGCGGCAAGCGGCCTCTCCGTCCTTAGC
GTAGCCCTTTCCGGGATCGTCCTCATCATTACATTTGTGGTCTGTGCGGTTGCAGCGCTGCTCTACAGCTTCTTCATCGC
TTTAGGGGAGGTTCAGGCCGCCGTCGGCATCGTCGTGGGCCCTCTCGCTGTCGCGCTCGCATTCTCGGATTATTCGCGCC
GCTTCTTCGTCTCTTGGCTCGATTTCATGATTAGCGCCTCGATGTACACGGTCGTTGCCTCCGTCATGGCGCGACTCGTC
TCCAGCGCATTCACTTCCACCATGGTCGATCAGACTGACATCGGCACCCAGTCCCTTGCGGGCGCTGCCTATGCGCTCGG
CGTCGCGATTTTCATGCTGCTTGTCGCACTGGAGATCCCCAAGATGGCGGGCGCAATCTTCGGCTCCGGAGGCGGGCTGA
GCGGGGGTGCGGCCGGGCGTCTGGGCATGAAAGCCGCTAGCGGAATCGGCGGGTTCCTGGCCAAGAAGGGCAAGTGA

Upstream 100 bases:

>100_bases
GTGCCAGGAAGCCATGCTATTGCGTCTATTGATTCTACTGGTCACTGCTGCGCTATTGCACGCAAACGTGGCTTTCGCTC
AGACCGAGATTCCCCCCTTG

Downstream 100 bases:

>100_bases
TGACGGACCATCACCACCTGACTCCAGCGGCTTTGCTGGCATCCCACGACAGCCGCCTGGCGTTGGTCCGACAGTATGCC
AACGAATCGGATGACGGAGA

Product: putative entry exclusion protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MIGSQAEESTKTPPSFSGQKGTIAESLKSWVGQFESFRSGLIASATPLSQTIRSETDKVAYGLALITLTLAGIRFAATND
PTTAWTDIFEAFMLLGIFAGIYLGYDKFAPGIFDWFKMLGDKIAGTRSSNPALTLISVGTGFLDTYNKAMDAASGLSVLS
VALSGIVLIITFVVCAVAALLYSFFIALGEVQAAVGIVVGPLAVALAFSDYSRRFFVSWLDFMISASMYTVVASVMARLV
SSAFTSTMVDQTDIGTQSLAGAAYALGVAIFMLLVALEIPKMAGAIFGSGGGLSGGAAGRLGMKAASGIGGFLAKKGK

Sequences:

>Translated_318_residues
MIGSQAEESTKTPPSFSGQKGTIAESLKSWVGQFESFRSGLIASATPLSQTIRSETDKVAYGLALITLTLAGIRFAATND
PTTAWTDIFEAFMLLGIFAGIYLGYDKFAPGIFDWFKMLGDKIAGTRSSNPALTLISVGTGFLDTYNKAMDAASGLSVLS
VALSGIVLIITFVVCAVAALLYSFFIALGEVQAAVGIVVGPLAVALAFSDYSRRFFVSWLDFMISASMYTVVASVMARLV
SSAFTSTMVDQTDIGTQSLAGAAYALGVAIFMLLVALEIPKMAGAIFGSGGGLSGGAAGRLGMKAASGIGGFLAKKGK
>Mature_318_residues
MIGSQAEESTKTPPSFSGQKGTIAESLKSWVGQFESFRSGLIASATPLSQTIRSETDKVAYGLALITLTLAGIRFAATND
PTTAWTDIFEAFMLLGIFAGIYLGYDKFAPGIFDWFKMLGDKIAGTRSSNPALTLISVGTGFLDTYNKAMDAASGLSVLS
VALSGIVLIITFVVCAVAALLYSFFIALGEVQAAVGIVVGPLAVALAFSDYSRRFFVSWLDFMISASMYTVVASVMARLV
SSAFTSTMVDQTDIGTQSLAGAAYALGVAIFMLLVALEIPKMAGAIFGSGGGLSGGAAGRLGMKAASGIGGFLAKKGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32980; Mature: 32980

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGSQAEESTKTPPSFSGQKGTIAESLKSWVGQFESFRSGLIASATPLSQTIRSETDKVA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
YGLALITLTLAGIRFAATNDPTTAWTDIFEAFMLLGIFAGIYLGYDKFAPGIFDWFKMLG
HHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DKIAGTRSSNPALTLISVGTGFLDTYNKAMDAASGLSVLSVALSGIVLIITFVVCAVAAL
HHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSFFIALGEVQAAVGIVVGPLAVALAFSDYSRRFFVSWLDFMISASMYTVVASVMARLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSAFTSTMVDQTDIGTQSLAGAAYALGVAIFMLLVALEIPKMAGAIFGSGGGLSGGAAGR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
LGMKAASGIGGFLAKKGK
HHHHHHHCHHHHHHCCCC
>Mature Secondary Structure
MIGSQAEESTKTPPSFSGQKGTIAESLKSWVGQFESFRSGLIASATPLSQTIRSETDKVA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
YGLALITLTLAGIRFAATNDPTTAWTDIFEAFMLLGIFAGIYLGYDKFAPGIFDWFKMLG
HHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
DKIAGTRSSNPALTLISVGTGFLDTYNKAMDAASGLSVLSVALSGIVLIITFVVCAVAAL
HHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYSFFIALGEVQAAVGIVVGPLAVALAFSDYSRRFFVSWLDFMISASMYTVVASVMARLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSAFTSTMVDQTDIGTQSLAGAAYALGVAIFMLLVALEIPKMAGAIFGSGGGLSGGAAGR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
LGMKAASGIGGFLAKKGK
HHHHHHHCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA