| Definition | Cupriavidus necator megaplasmid pHG1, complete sequence. |
|---|---|
| Accession | NC_005241 |
| Length | 452,156 |
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The map label for this gene is 38638026
Identifier: 38638026
GI number: 38638026
Start: 379162
End: 380418
Strand: Direct
Name: 38638026
Synonym: PHG365
Alternate gene names: NA
Gene position: 379162-380418 (Clockwise)
Preceding gene: 38638025
Following gene: 38638027
Centisome position: 83.86
GC content: 64.2
Gene sequence:
>1257_bases ATGACGGACCATCACCACCTGACTCCAGCGGCTTTGCTGGCATCCCACGACAGCCGCCTGGCGTTGGTCCGACAGTATGC CAACGAATCGGATGACGGAGACTTCCGCACGAAGTGGCTGAGCGTCCTGGATCGATGTGCCGCCTGGTTCTCCAGCATGC CGCTTCGGCCGACAGAGCACGCCGAGCCTGGTGGGGCATTCCGCGCGACGGTCGAAGCCGCGTACTTCGCCATGCGACTG TCCGGCGCCCAGAAGTTTGCCGCAGACCAGACCTCGGAACGCCGGCGCAAGCTCGAGCCTCAGTACCTGTATGCGCTGTT CCTCGCCGCGTGCTGTTCGCGGCTGGACGAGCCCTGCCGCCACTTCCAGTTTCACCGGATGCGCGATGGAGCGGAATGGG TTCCTGCCGCACACGGGGCATTCGGCGCGTGGCTTGGCGATGACACCTACCGGGTCACCCGCCGTGAGGCACCTCTTCCG AGCGAGCGGATGCGCACGGCACTACTCGCGCGGGAAATTCTGGGTACGGAGCGGTTAGGCGCATTTGACAGCCAGGTACT GACCGATTTGTTCGGCGCCATCAACCCAGATCCACGGCCAGCCGGCCTGGAAACGCTGCTGCACAAGGTGGTGCGTCAGG CCATCGAAACCGTCACCCAGTTCGAGTTGAAGGCCCGTCGGGCGGCATTTGCCCCGGACACAACGCCTGCCCCGTCAGCA CAAGCGCTGGCTGTTGATGCCATCACCGGCGCGTCGACGCCGCCCGCGCAGGCGAGAACGGAGACGGCGCCCGTACCCGA GACGGGGACGGCGACGCCCGTGGAAGTGGAGCAACCGGAGACTACGACCGAGGCGGATCCAAGCTCCCCAGCCGGACTCC ATCAGGCCGGCAGCGATGCGAGCGCGCAGCACCGTGCGTCGCCTAACGCCGTACAGCTCGACGGTGCCCGATCCTTACGC AAAGAAGCACCGGCCGAGGATCCATTCAAGGCGATTGCAGGCACCTCGAACCTCATGCGCGAATTCTTCAAGGCGCTCTC CCAGGACGCGGCCGCCGGCAAGACGAAGGTAACCCGGGTTGAGGGAAAGGTTGCCATCAGTAAGCGCTCGCTCGGCAACT ATGGCATTGCCTCCGAGACGCTCATCGAAAATCTGCGCAAGTTCAAGCATCTCTACAAGATCGTGGGGCAAGACATCCTG CTGGTCAACGAAGTTGGCGACCTGATCCTGCCTGCCTCCCAAGCCCCTGAAGCATGA
Upstream 100 bases:
>100_bases TCTTCGGCTCCGGAGGCGGGCTGAGCGGGGGTGCGGCCGGGCGTCTGGGCATGAAAGCCGCTAGCGGAATCGGCGGGTTC CTGGCCAAGAAGGGCAAGTG
Downstream 100 bases:
>100_bases ACCAGTACATTAACCACTTCCGTCCCATCTACGAGTTCCGCGCGGTCGTCGGTTGGGCATTGGCTGTCCTGCTGCTTCTG GTGAGCGGCATGCCCAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTDHHHLTPAALLASHDSRLALVRQYANESDDGDFRTKWLSVLDRCAAWFSSMPLRPTEHAEPGGAFRATVEAAYFAMRL SGAQKFAADQTSERRRKLEPQYLYALFLAACCSRLDEPCRHFQFHRMRDGAEWVPAAHGAFGAWLGDDTYRVTRREAPLP SERMRTALLAREILGTERLGAFDSQVLTDLFGAINPDPRPAGLETLLHKVVRQAIETVTQFELKARRAAFAPDTTPAPSA QALAVDAITGASTPPAQARTETAPVPETGTATPVEVEQPETTTEADPSSPAGLHQAGSDASAQHRASPNAVQLDGARSLR KEAPAEDPFKAIAGTSNLMREFFKALSQDAAAGKTKVTRVEGKVAISKRSLGNYGIASETLIENLRKFKHLYKIVGQDIL LVNEVGDLILPASQAPEA
Sequences:
>Translated_418_residues MTDHHHLTPAALLASHDSRLALVRQYANESDDGDFRTKWLSVLDRCAAWFSSMPLRPTEHAEPGGAFRATVEAAYFAMRL SGAQKFAADQTSERRRKLEPQYLYALFLAACCSRLDEPCRHFQFHRMRDGAEWVPAAHGAFGAWLGDDTYRVTRREAPLP SERMRTALLAREILGTERLGAFDSQVLTDLFGAINPDPRPAGLETLLHKVVRQAIETVTQFELKARRAAFAPDTTPAPSA QALAVDAITGASTPPAQARTETAPVPETGTATPVEVEQPETTTEADPSSPAGLHQAGSDASAQHRASPNAVQLDGARSLR KEAPAEDPFKAIAGTSNLMREFFKALSQDAAAGKTKVTRVEGKVAISKRSLGNYGIASETLIENLRKFKHLYKIVGQDIL LVNEVGDLILPASQAPEA >Mature_417_residues TDHHHLTPAALLASHDSRLALVRQYANESDDGDFRTKWLSVLDRCAAWFSSMPLRPTEHAEPGGAFRATVEAAYFAMRLS GAQKFAADQTSERRRKLEPQYLYALFLAACCSRLDEPCRHFQFHRMRDGAEWVPAAHGAFGAWLGDDTYRVTRREAPLPS ERMRTALLAREILGTERLGAFDSQVLTDLFGAINPDPRPAGLETLLHKVVRQAIETVTQFELKARRAAFAPDTTPAPSAQ ALAVDAITGASTPPAQARTETAPVPETGTATPVEVEQPETTTEADPSSPAGLHQAGSDASAQHRASPNAVQLDGARSLRK EAPAEDPFKAIAGTSNLMREFFKALSQDAAAGKTKVTRVEGKVAISKRSLGNYGIASETLIENLRKFKHLYKIVGQDILL VNEVGDLILPASQAPEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45442; Mature: 45310
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHHHLTPAALLASHDSRLALVRQYANESDDGDFRTKWLSVLDRCAAWFSSMPLRPTEH CCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC AEPGGAFRATVEAAYFAMRLSGAQKFAADQTSERRRKLEPQYLYALFLAACCSRLDEPCR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HFQFHRMRDGAEWVPAAHGAFGAWLGDDTYRVTRREAPLPSERMRTALLAREILGTERLG HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHC AFDSQVLTDLFGAINPDPRPAGLETLLHKVVRQAIETVTQFELKARRAAFAPDTTPAPSA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QALAVDAITGASTPPAQARTETAPVPETGTATPVEVEQPETTTEADPSSPAGLHQAGSDA CCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHCCCCC SAQHRASPNAVQLDGARSLRKEAPAEDPFKAIAGTSNLMREFFKALSQDAAAGKTKVTRV CHHHCCCCCCEEECCHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEE EGKVAISKRSLGNYGIASETLIENLRKFKHLYKIVGQDILLVNEVGDLILPASQAPEA CCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCEECCCCCCCC >Mature Secondary Structure TDHHHLTPAALLASHDSRLALVRQYANESDDGDFRTKWLSVLDRCAAWFSSMPLRPTEH CCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC AEPGGAFRATVEAAYFAMRLSGAQKFAADQTSERRRKLEPQYLYALFLAACCSRLDEPCR CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH HFQFHRMRDGAEWVPAAHGAFGAWLGDDTYRVTRREAPLPSERMRTALLAREILGTERLG HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHC AFDSQVLTDLFGAINPDPRPAGLETLLHKVVRQAIETVTQFELKARRAAFAPDTTPAPSA HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QALAVDAITGASTPPAQARTETAPVPETGTATPVEVEQPETTTEADPSSPAGLHQAGSDA CCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHCCCCC SAQHRASPNAVQLDGARSLRKEAPAEDPFKAIAGTSNLMREFFKALSQDAAAGKTKVTRV CHHHCCCCCCEEECCHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEE EGKVAISKRSLGNYGIASETLIENLRKFKHLYKIVGQDILLVNEVGDLILPASQAPEA CCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA